Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa08g0891 ATGAGAACAGCAGGACAAATCGATAACCAGTCATCATCTTCCTCCTCTTCTTCCATTGATAGCAGTAATTACCCTTCTGGGAAACCACCAGCTTCTTCTTCTTCTTCATCATCATCTTCTTCTTCTCTGTGCCTCTCAAGTGTTTGTAGAAATGCCAGAGCTGATTTGATCACTGACCTCAGACTTGGCCTTACTATCTCTCCTTCTCCACCTAACTTTTCCAATTCAAATCCCAGGTTAAGGGATCAATCTTCAGATTGGCCACCAATTAAGTCCATCTTGAGGAGCACCCTTGTTGAGAAACAGAACCAGCTAAGCCAGAGACCCTCCTTGTTTGTCAAAGTCTACATGGAAGGCATCCCCATAGGTAGAAAACTGAATCTGCTTCAACACCATAGTTATGATGGGCTTGTCAGAGCTCTTGGCCTTATGTTCAGGACCACCATTCTCTGTCCTCATTCTCAACCACTTCATTATGGAAATTTTCATGTCTTGACTTATGAAGATCAAGAAGGAGACTGGATGATGGTTGGAGATGTGCCATGGGAGATGTTCTTGACCAGTGTGAAAAGGCTTAAGATCACAAGAGCAGACAGATGCTAA 603 0.4345 MRTAGQIDNQSSSSSSSSIDSSNYPSGKPPASSSSSSSSSSSLCLSSVCRNARADLITDLRLGLTISPSPPNFSNSNPRLRDQSSDWPPIKSILRSTLVEKQNQLSQRPSLFVKVYMEGIPIGRKLNLLQHHSYDGLVRALGLMFRTTILCPHSQPLHYGNFHVLTYEDQEGDWMMVGDVPWEMFLTSVKRLKITRADRC 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa08g0891 200 Gene3D - 105 200 - -
Bisa08g0891 200 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 58 198 IPR003311 GO:0005634|GO:0006355
Bisa08g0891 200 SUPERFAMILY CAD & PB1 domains 103 194 - -
Bisa08g0891 200 ProSiteProfiles PB1 domain profile. 110 199 IPR000270 GO:0005515
Bisa08g0891 200 MobiDBLite consensus disorder prediction 1 41 - -
Bisa08g0891 200 Pfam AUX/IAA family 73 196 IPR033389 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa08g0891 Bisa-ChrBisa08 16117843 16119593 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa08g0891 100 200 B3 DNA Binding Superfamily AT2G46530 34.314 3.34e-10 57.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Bisa08g0891 AUX_IAA 1.3e-32 CL0072