Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa08g0876 ATGATTCAATGTTTAAATGGTAGAAGATGTAGCAGTCACAGTGGGTGGGTGCAAAGGACAAGGTGCCCTCCAGATTTGCATCATGGATGCCCTTTGAAGAGTGACATGCATTACAATAGTCACCGCCGACACTTGCATTTCAGACACAACCCTCCAACCTCAGACCTCAGACCTCAAACCTCAAATCAAAACACACTGTTCTGTAATTCCAACTCCTCCTTCCTTTTTATGGCCCTATTTTTAGACACCGACTCTGCCATGAACCTCACCTCCAACCCTCCCTTCTTCTTAAATTCCAGACACCCTTATAGCTTTTCAATTGCTCTTTCTTCTTCACCAAAAATGGTGTCTCGAACACCCACTATCACGTTCATCTTCCTGCTGATTCTGGGTGTTTTCACCCCATTTGGTGATGCTGGTCCAGCGGTGACTGAACTTAGGGTGTCAGAGTGCTTAAAGGTTTCCTCTTCTGAATTCTTAGACTCTGTGAGAGTAATCATTGGCGTTTTGGAGGAGGTTACCTCCATCTTGTCTCATTTCTCCAATGTTTTTGGCGATTTTCGTCTCTCCAATGCCATTTCTGACTGCCTCGACTTGCTCGATTTGTCTTTCGATGAGCTCAACTGGTCTGCCGCTGCTACTGAGAATCCCAATGGCAAGCATAACAGCACTGGAGACTTGACCTCTGATTTGAAGACATGGCTAAGTGCTGCACTTTCCAATCCAGACACATGCATGGAGGGGTTCGAAGGCACCAATAGCGTTGTGAAGGGTCTAGTATCATCTGGCCTGAGCCAAGTGATCTCATTGGTCCAGAAGCTTCTCGGCCAGGTTCACCCTGGTCCAGACGACTTCCCTACAAGCAAGGGACAATTCCCTTCATGGATCAAGCCAAGGGACCAGATGTTCCTCCAAGCAAGTCAGGTCACTGCGGATGTTGTAGTAGCAGCAGATGGAACCGGGGATTTCACCACAGTGACAGATGCAGTTCTAGCAGCCCCTGATTATAGCATGAGACGCTTTGTGATATTCATAAAGAGGGGTGTGTACAATGAGTACGTGGAGATCAAGAAGAAGAAATGGAATCTCATGATGATTGGAGAAGGCATGGATATCACTGTCATTTCCGGCAACCGGAATTTTATCGACGGTTGGACCACATTCCGGTCAGCTACTTTCGCTGTTAGTGGGAGAGGGTTCATAGCACGAGACATTACCTTCCAGAACACAGCAGGTCCAGAGAAGCACCAAGCAGTGGCACTAAGATCAGACTCAGACCTCTCTGTGTTCTACCGCTGCGGCATCTACGGCTTCCAAGATAGCCTCTACACCCACACGATGCGTCAATTCTACAGAGACTGCAAAATAACAGGCACAGTGGATTTCATCTTCGGAGACGGCACCGTGGTGTTCCAAAACTGCCTGATCATCGCCAGAAAAGGCTTACGAGGCCAGAAAAACACCATCACAGCACAAGGAAGAAAAGACCCAAATCAGCCAACGGGATTCTCCCTTCAATTCTGCAAAATCTCCGCAGACTCCGACCTCAATTCCAAGGAGACATACCTCGGGAGACCCTGGAAGTCATTTTCTCGAACAGTTTACATGCAATCTTACATGAGCGGGGCGGTGAATCCCCAAGGGTGGCTCGAGTGGAATGGGAACCTGTACTTGGACACATTGTATTACGCGGAGTACATGAACCGTGGCCCAGGGGCTGGATTGTCGAGCCGAGTGAGTTGGCCAGGGTTCCATGTGTTGACGAACCCGAAGGAAGCGAATGGCTATACGGTGGCTCAGTTTATTCAAGGGAATATGTGGCTGCCTACCACAGGCGTAAAGTACACTGCTGGATTGGGCAATTAA 1866 0.485 MIQCLNGRRCSSHSGWVQRTRCPPDLHHGCPLKSDMHYNSHRRHLHFRHNPPTSDLRPQTSNQNTLFCNSNSSFLFMALFLDTDSAMNLTSNPPFFLNSRHPYSFSIALSSSPKMVSRTPTITFIFLLILGVFTPFGDAGPAVTELRVSECLKVSSSEFLDSVRVIIGVLEEVTSILSHFSNVFGDFRLSNAISDCLDLLDLSFDELNWSAAATENPNGKHNSTGDLTSDLKTWLSAALSNPDTCMEGFEGTNSVVKGLVSSGLSQVISLVQKLLGQVHPGPDDFPTSKGQFPSWIKPRDQMFLQASQVTADVVVAADGTGDFTTVTDAVLAAPDYSMRRFVIFIKRGVYNEYVEIKKKKWNLMMIGEGMDITVISGNRNFIDGWTTFRSATFAVSGRGFIARDITFQNTAGPEKHQAVALRSDSDLSVFYRCGIYGFQDSLYTHTMRQFYRDCKITGTVDFIFGDGTVVFQNCLIIARKGLRGQKNTITAQGRKDPNQPTGFSLQFCKISADSDLNSKETYLGRPWKSFSRTVYMQSYMSGAVNPQGWLEWNGNLYLDTLYYAEYMNRGPGAGLSSRVSWPGFHVLTNPKEANGYTVAQFIQGNMWLPTTGVKYTAGLGN 621
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa08g0876 621 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 166 271 IPR035513 -
Bisa08g0876 621 FunFam Pectinesterase 306 619 - -
Bisa08g0876 621 CDD PMEI-like_4 121 280 - -
Bisa08g0876 621 ProSitePatterns Pectinesterase signature 2. 456 465 IPR033131 -
Bisa08g0876 621 SMART PMEI_2 155 274 IPR006501 GO:0004857
Bisa08g0876 621 Pfam Pectinesterase 312 605 IPR000070 GO:0030599|GO:0042545
Bisa08g0876 621 Pfam Plant invertase/pectin methylesterase inhibitor 172 268 IPR006501 GO:0004857
Bisa08g0876 621 Gene3D - 305 619 IPR012334 -
Bisa08g0876 621 ProSitePatterns Pectinesterase signature 1. 337 356 IPR018040 -
Bisa08g0876 621 SUPERFAMILY Pectin lyase-like 308 618 IPR011050 -
Bisa08g0876 621 PANTHER PECTINESTERASE 176 610 - -
Bisa08g0876 621 Gene3D Invertase/pectin methylesterase inhibitor family protein 157 278 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa08g0876 Bisa-ChrBisa08 15743206 15746154 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa08g0876 121 619 Carbohydrate Esterase AT3G43270 60.348 0.0 660