Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa08g0875 ATGGCTTCCTCATTGTCTCTCAAACTCTCTCTTCTCCTTCTCCTACCAATCTTTCTCTCAGACACCATCACTGCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCCCCAACAACATCACGAGCAAATCTCACTACTTTAAAATCCTTCTGCAGAACCACGCCATACCCCGAAGCCTGCTTCGATTCCCTGAAGCTCTCGATTTCCATCAACATCAGCCCCAACATCCTCACCTTCCTCCTCCACTCCCTGCAAACCGCTATCTCGGAGGCCACCAAGCTCTCCGATCTGTTCCACGCAGCCGGAGGCGGAGAAGGACGTTCTTCGAACATCGTGGAGAAGCAGAGAGGGTCGATCCAGGACTGCACGGAGCTGCACCAGTCGACGGTGGCGTCTCTGAGGAGATCGCTGGCCGGAGTTCGGGATTCGCCGGCGTCCTCGCGGAAGCTCGCCGACGCCAGAGCGTACCTGAGCGCCGCCGTCACCAACGAGAACACTTGCCTCGAAGGGCTGGAATCGACTACGGGAGCGCTCAAGGGTACTCTGGTGGACTCTGTTGTCAGAACCTATAAACATGTCGCCAATTCTCTCTCCATGCTCCCTAAACCAGAGTTGAGACGAGGTTCAAGAGGGCAGAAGAACCGGCGTCGTTTGATGGGAGCTCCGGCGTGGCTGAGGAGCGGCGAACGTCGGATCTTGGAAGGGGACGAGTACGATCCCGAGGAGGTTCTCGTGGTGGCTGCCGACGGAACGGCGAATTTCAGCACCATTAGCGAAGCAGTGAACTTCGCTCCGAACAATAGCTTGGAGAGGACGGTGATCTACGTGAAGGCAGGGGTTTATAAGGAGAATGTGGAGATTCCGAGTAACAAGATCAACATTGTTCTGCTTGGAGATGGAAGTGATGTCACTGTTATTACTGCTAACAGAAGCGTGGGTGATGCCTGGACCACTTTCAGATCTGCAACTCTAGCGGTATCCGGTGAGGGGTTTCTGGCGCGTGACATTGCGATCGAGAACAGCGCCGGACCAGAGAAGCACCAAGCGGTAGCCTTAAGAGTAAACGCCGACTTAACCGCCTTCTACAGATGCGCCGTCTACGGCTTCCAAGACACGCTCTACGTACACTCCTTCCGCCAATTCTACCGAGAATGCGACATCTACGGCACCATCGACTTCATCTTCGGCAACGCCGCCGTCGTCCTCCAGGCGTGCGACATCGTCTCGCGCAAGCCCCTCCCTCACCAGTTCACCGTCGTCACCGCGCAGTCCCGAGACACGCCCGACGAGGACACCGGAATCTCGATCCACAATTGCTCGATTCTCGCCACCGAGGATCTGTACTCGAATTCGAGCAGCGTCAAGAGCTACCTCGGACGGCCGTGGAGGAATTTTTCTCGGACGGTGGTTATGGAGTCGTATATTGATGATTTTGTGGATCCGACGGGGTGGACGCCGTGGTCGGCGGAGGACGGGGATGAGGGGTTGGAGGGATTGTACTATGGGGAGTACAAGAATTACGGGCCGGGTTCGGGTACGGGCGAGAGGGTGAATTGGGTGGGGTACCATGTGATGGGGTACAAGGATGCGTATAATTTTACGGTTTCGGAGTTTATTATGGGTGATGCTTGGCTCGAGTCTACTTCGTTTCCTTATGACGATGGGATTTGA 1671 0.5512 MASSLSLKLSLLLLLPIFLSDTITASSSSSSSSSSSPTTSRANLTTLKSFCRTTPYPEACFDSLKLSISINISPNILTFLLHSLQTAISEATKLSDLFHAAGGGEGRSSNIVEKQRGSIQDCTELHQSTVASLRRSLAGVRDSPASSRKLADARAYLSAAVTNENTCLEGLESTTGALKGTLVDSVVRTYKHVANSLSMLPKPELRRGSRGQKNRRRLMGAPAWLRSGERRILEGDEYDPEEVLVVAADGTANFSTISEAVNFAPNNSLERTVIYVKAGVYKENVEIPSNKINIVLLGDGSDVTVITANRSVGDAWTTFRSATLAVSGEGFLARDIAIENSAGPEKHQAVALRVNADLTAFYRCAVYGFQDTLYVHSFRQFYRECDIYGTIDFIFGNAAVVLQACDIVSRKPLPHQFTVVTAQSRDTPDEDTGISIHNCSILATEDLYSNSSSVKSYLGRPWRNFSRTVVMESYIDDFVDPTGWTPWSAEDGDEGLEGLYYGEYKNYGPGSGTGERVNWVGYHVMGYKDAYNFTVSEFIMGDAWLESTSFPYDDGI 556
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa08g0875 556 ProSitePatterns Pectinesterase signature 2. 387 396 IPR033131 -
Bisa08g0875 556 Pfam Plant invertase/pectin methylesterase inhibitor 47 199 IPR006501 GO:0004857
Bisa08g0875 556 Gene3D - 239 556 IPR012334 -
Bisa08g0875 556 FunFam Pectinesterase 43 202 - -
Bisa08g0875 556 CDD PMEI-like_3 49 203 - -
Bisa08g0875 556 NCBIfam pectinesterase inhibitor domain 27 200 IPR006501 GO:0004857
Bisa08g0875 556 Pfam Pectinesterase 244 542 IPR000070 GO:0030599|GO:0042545
Bisa08g0875 556 Gene3D Invertase/pectin methylesterase inhibitor family protein 43 202 IPR035513 -
Bisa08g0875 556 SMART PMEI_2 42 199 IPR006501 GO:0004857
Bisa08g0875 556 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 47 200 IPR035513 -
Bisa08g0875 556 FunFam Pectinesterase 238 556 - -
Bisa08g0875 556 PANTHER PECTINESTERASE 18 546 - -
Bisa08g0875 556 SUPERFAMILY Pectin lyase-like 242 553 IPR011050 -
Bisa08g0875 556 ProSitePatterns Pectinesterase signature 1. 268 287 IPR018040 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa08g0875 Bisa-ChrBisa08 15708220 15714018 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa08g0875 45 556 Carbohydrate Esterase AT2G26440 67.308 0.0 721