Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa08g0874 ATGTGTGTGGTCCAGAGTGAGTGCACCTTAATCTCGCATCGTGAAAATTGGATTGTCCAGCTCCAAGAAGGAACCACAATAATTAATATAATTAAGGTTTCTAAAATTAAACCATCCATCACTCTCTTCCCTTACCTCGCCATCCCTCTCTTTTCACCTCCCTTCCCTTCCCTCCCTTCTAAGGCAGAGGCTTCTTGCTCTCTGCCTTACACCCATCACTCTCGTCTCTTTTTCCCGTTTATCCCACCCATGGCATTTCAGGACTTCGACCTCATCACCGAGAAGAGGAGAAATGACAGGAGGCAGAAGCTCAAGCGCAGAATCGCCGTTGGCGCGGTGGCAACCGTCGTTTTGGCCGGGATCGTTGGCGCATTGGTGTTTGTAGTCCTCAACCAGAGTGAGGACAAGGAGAAAGTCAGTGACAGTAGCAAGCAGAATTCGCCATTGCCATCCAGGCCTGGCTCGGCCCACCCAAGCCCATCATCTCATTCTCCTCCTCCTCCCAAGGAAACCCCCAAATCCGAGGACGCCATGCCCAATAATGCGGGAGGGGACAAACTCATCAAGACGTTTTGCAACCTCACGGACTTCAAGGAGATGTGCGAGGCGAGTATCGGGAAGGAGCTAGAGAAGAATTCGAGCGTCGGAGAACCCAAAGATGTGTTCAAGGCTTCGATTAAGGTGGCTTTGGACGAGGTTAATAATGCTACTAATATAACCCAGGGCATGAACTTTCAATCCGATCAAGAGAAAGGGGCTTACGAGGATTGTAAGGCTTTGTTAGCGAACGCGACTGAAGAGTTAGGGTTGTCATCAACACTGGTGGCGTCAGTTGATTTGAAGGATCTGTCGCCGGTTTCCTCCGATTTGAACAGCTGGCTCAGTGCGGTTATCTCGTACACGCAGACATGCGTGGATGGGTTTCCCGAGGGGCAATTGAAGACGGACATGAAGGGTGCGTTCGAGGGTTCAAAGAATCTCGTGAGCAATGCTCTGGCGATCTTGTCGGAGTTGGGGACGTTTGCGAATTCGGTGGATTCGTCGGAGAAAGTGTTGGCGGGGGCGGAGAGTGGAAGCCGTCGCTTGCTGTCGTCGCCGTCGTCGTTATTGGGTGTGGTGGTAGGAGATGGATTCTTGGGTAAAGCAATGGGCTTCAGAAACACCGCAGGCCCAGATAAGCTCCAAGCCGTTGCCGCAAGGGTCCAAGGCGATCGCGCCGTGTTCGTGAACTGTCGTTTCGAAGGCTTCCAAGACACTCTCTACGTCCAAACCCACCGCCAATTCTACCGAAGCTGCGTCGTCTCCGGCACCATCGACTTCATCTTCGGCGACGCTGCCGTCGTCTTCCAGAACTGCATCCTCAACCTCCGAAAGCCCCTCGACAATCAGCAGAATATCGTCACAGCTCAGGGCAGAGCCGACAAGCGCGAGACCACCGGCATCGTGTTGCAGAACTGCCAGATCAAAGCCGACGATTCGCTCACTGCGGTGAAAGATCAGATCAAGAGCTACCTCGGGAGGCCGTGGAAGGAGTTCTCCAGAACCATCGTGATGGAATCAGAGATCGATGATATAATCCATCCCGAAGGATGGCTCGAGTGGCAAGGCGAGTTCGCACTCAGCACGCTGTACTATGCGGAGTACAACAACACCGGAAATGGCGCGAAAACCGATAACAGAGTAAAGTGGCCTGGGTACAAGGTCATTGAGAAGGAGGAGGCGAAAAACTACACTGTGGAGTCGTTCTTGACAGGGGATTGGATCAGCGGATTTAGCGTGCCGGTTCAGCGAGGATTCTATAATTCGTGA 1809 0.5263 MCVVQSECTLISHRENWIVQLQEGTTIINIIKVSKIKPSITLFPYLAIPLFSPPFPSLPSKAEASCSLPYTHHSRLFFPFIPPMAFQDFDLITEKRRNDRRQKLKRRIAVGAVATVVLAGIVGALVFVVLNQSEDKEKVSDSSKQNSPLPSRPGSAHPSPSSHSPPPPKETPKSEDAMPNNAGGDKLIKTFCNLTDFKEMCEASIGKELEKNSSVGEPKDVFKASIKVALDEVNNATNITQGMNFQSDQEKGAYEDCKALLANATEELGLSSTLVASVDLKDLSPVSSDLNSWLSAVISYTQTCVDGFPEGQLKTDMKGAFEGSKNLVSNALAILSELGTFANSVDSSEKVLAGAESGSRRLLSSPSSLLGVVVGDGFLGKAMGFRNTAGPDKLQAVAARVQGDRAVFVNCRFEGFQDTLYVQTHRQFYRSCVVSGTIDFIFGDAAVVFQNCILNLRKPLDNQQNIVTAQGRADKRETTGIVLQNCQIKADDSLTAVKDQIKSYLGRPWKEFSRTIVMESEIDDIIHPEGWLEWQGEFALSTLYYAEYNNTGNGAKTDNRVKWPGYKVIEKEEAKNYTVESFLTGDWISGFSVPVQRGFYNS 602
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa08g0874 602 FunFam Pectinesterase 4 325 599 - -
Bisa08g0874 602 Gene3D - 336 599 IPR012334 -
Bisa08g0874 602 Gene3D Invertase/pectin methylesterase inhibitor family protein 184 335 IPR035513 -
Bisa08g0874 602 SMART PMEI_2 183 334 IPR006501 GO:0004857
Bisa08g0874 602 MobiDBLite consensus disorder prediction 137 182 - -
Bisa08g0874 602 NCBIfam pectinesterase inhibitor domain 181 338 IPR006501 GO:0004857
Bisa08g0874 602 PANTHER PECTINESTERASE 129 349 - -
Bisa08g0874 602 CDD PMEI-like_3 190 340 - -
Bisa08g0874 602 ProSitePatterns Pectinesterase signature 2. 434 443 IPR033131 -
Bisa08g0874 602 FunFam Pectinesterase 184 339 - -
Bisa08g0874 602 SUPERFAMILY Pectin lyase-like 367 590 IPR011050 -
Bisa08g0874 602 MobiDBLite consensus disorder prediction 153 173 - -
Bisa08g0874 602 Pfam Pectinesterase 372 586 IPR000070 GO:0030599|GO:0042545
Bisa08g0874 602 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 185 338 IPR035513 -
Bisa08g0874 602 Pfam Plant invertase/pectin methylesterase inhibitor 187 334 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa08g0874 Bisa-ChrBisa08 15701965 15705843 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa08g0874 346 602 Carbohydrate Esterase AT2G26450 58.687 1.15e-106 332