Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa08g0866 ATGATGTTCAATGCTCAGGGTCCTTCAAAAAAATCTAGTCTCCTTGCCGTCCTAAGTGGAAAATCACGTGACAATAAACAAAAGCAGAAGCAGGATGACTCTGAGGCTCAATCTTCATACCCCCTTCCAGAGCTTGCTTCATCTAGGCGTCTTGAGGTGCATCTTTTGATTAAACCAACTGTTGATGAGTTTTGCCGAGTTCTTGAAGCGGTGGAGCCGAATTTTGTTTACTTGCAAGGCCAGCAGCTTGAAGACAATGAACAAATTGGGTCTCTAGTATGGGAAGATGTTGAACTTTCTAACCCAGAAGCCTTATGTGGATTATTTTCTTCCAAAGTACCCAATACCGTCTATTTGGAAACTCCTAAAGGAGAAAAATTGGCAGAAGCACTCTATTCTAAGGGAGTTCCTTACACTATATATTGGAAAGGTGAATTTTCAAAGTTTGCAGCATCACATTTTCGTCTAGCTTTTTTCTCAGTGGCACAAAGTACATCCAGCCATACATGGGATGCTTTCCAGCTAGCCCTTGCATCTTTCAAATTATATTGTGTACAAAATAATGCCTTACCTTCTAGCAGCCTGAAGGGCAGTGGCAAGCTTGTGCCACGAATGCTTGGGGACCCTCCCAACATTGATATTGGTCCATGTGAAGCAGACATGAATGGGGAGGAAAGCTCACCTGAGACTATTTCTGCAGTGAAGGTGTATGATGATGATGTGAACATGAGATTTCTTGTATGTGGAGTTCCGGCCATGCTGGACATTTGCTTATTGGGATCATTGGAGGATGGACTCAATGCTCTCCTGTGTACAGAAATACGGGGATGTAAACTTCACAACCGTACAAGTGCTCCACCACCACCGCTTCAGGCAGGGACATTTTCACGTGGTGTGGTGACCATGCGTTGTGATATTTCCACATGTAGTTCTGCTCATATATCACTTTTGGTGTCTGGTAGTGCAGATACTTGTTTTAATGATCAGCTTTTGGAAAACCATATTAAAAAGGAGCTGATTGAGAAGAGTCAGCTAGTTCAGGCATCTACTCATTATGAGCAAAGCTTCTCTGAGCCTCGAAGGTCAGCCTCGGTAGCCGGTGGAGCTAGTGTATTTGAAGTTTGTATACAGGTTCCTACATGGGCTTCACAGGTTCTAAGACAGCTCGCACCAGAAGTATCATATCGCAGCCTAGTTATGCTGGGAGTTGCCAGTATTCAAGGATTGCCTGTTGCATCTTTTAGTAAAGATGATGCTGATCGTCTTCTTTTCTTTTGTTCTAGGCAGTCAAAAGAAAATTGCTTTGACAATCCTATTTCCTTTGGGCATCCTAGTTGGTTGATACCTCCCGCACCTACTCGTAAAAGATTAGAGCCATCCTCTGGAATAAAGTCCATTAATGCTAGTATCCTTCATGTTGGAGATAGTGGTAATAGTAGACAGAAATTGAACATTGCTGCAATGAGGCCAATCCCTCACTCACATCGTCAGAAGATTCTACCTTTTTCTGGTTTGTCTGAGGGGGAAAGACTTGATGGCGAACGTGGAAAATCAAATCTGCCAGTTGCTCCTGTGAAGCATAATGGTATAGGCCCTAATCCAGTTACAAGTAGGAAATCTTTGTCAACTTCCTATCAGGCTCAGCAGATTATTTCTTTAAATCCACTACCTATGAAGAAGCATGGTTGTGACAGAGCTCCAATACGAGCTTGTTCAGAGGAGGAATTCCTGAAGGATGTAATGCAGTTTCTAATCCTTCGTGGGCATTCCCGTCTAATTCCACAAGGTGGTCTTGCTGAATTCCCTGAAGCAATTCTGAATGCAAAACGCCTTGACCTTTTTAACTTGTACAGAGAGGTGGTTTCAAGAGGAGGCTTTCATGTTGGAAATGGTATCAATTGGAAAGGACAAGTTTTCTCAAAGATGCGTAATCACACTTTGACAAATAGAATGACAGGCGTGGGCAATACACTAAAAAGGCACTACGAAACTTATCTTCTAGAATATGAATTGGCTCATGATGACGTGGATGGAGAGTGCTGCTTGTTGTGCCATAGTAGCGCAGCTGGTGATTGGGTGAACTGCGGGATATGTGGTGAGTGGGCTCACTTTGGCTGTGATAGGCGGCAAGGACTTGGGGCATTCAAGGACTATGCTAAAACTGATGGACTAGAGTACGTGTGTCCTCACTGCAGCATCTCAAATTTCAGGAAGAAATCCCAGAAAACTTCAAATGGGAATTAA 2244 0.4327 MMFNAQGPSKKSSLLAVLSGKSRDNKQKQKQDDSEAQSSYPLPELASSRRLEVHLLIKPTVDEFCRVLEAVEPNFVYLQGQQLEDNEQIGSLVWEDVELSNPEALCGLFSSKVPNTVYLETPKGEKLAEALYSKGVPYTIYWKGEFSKFAASHFRLAFFSVAQSTSSHTWDAFQLALASFKLYCVQNNALPSSSLKGSGKLVPRMLGDPPNIDIGPCEADMNGEESSPETISAVKVYDDDVNMRFLVCGVPAMLDICLLGSLEDGLNALLCTEIRGCKLHNRTSAPPPPLQAGTFSRGVVTMRCDISTCSSAHISLLVSGSADTCFNDQLLENHIKKELIEKSQLVQASTHYEQSFSEPRRSASVAGGASVFEVCIQVPTWASQVLRQLAPEVSYRSLVMLGVASIQGLPVASFSKDDADRLLFFCSRQSKENCFDNPISFGHPSWLIPPAPTRKRLEPSSGIKSINASILHVGDSGNSRQKLNIAAMRPIPHSHRQKILPFSGLSEGERLDGERGKSNLPVAPVKHNGIGPNPVTSRKSLSTSYQAQQIISLNPLPMKKHGCDRAPIRACSEEEFLKDVMQFLILRGHSRLIPQGGLAEFPEAILNAKRLDLFNLYREVVSRGGFHVGNGINWKGQVFSKMRNHTLTNRMTGVGNTLKRHYETYLLEYELAHDDVDGECCLLCHSSAAGDWVNCGICGEWAHFGCDRRQGLGAFKDYAKTDGLEYVCPHCSISNFRKKSQKTSNGN 747
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa08g0866 747 Gene3D - 567 673 IPR036431 GO:0003677
Bisa08g0866 747 SUPERFAMILY ARID-like 571 685 IPR036431 GO:0003677
Bisa08g0866 747 MobiDBLite consensus disorder prediction 1 22 - -
Bisa08g0866 747 MobiDBLite consensus disorder prediction 508 539 - -
Bisa08g0866 747 ProSiteProfiles ARID domain profile. 570 674 IPR001606 GO:0003677
Bisa08g0866 747 Pfam ARID/BRIGHT DNA binding domain 573 670 IPR001606 GO:0003677
Bisa08g0866 747 SMART ARID_2 567 670 - -
Bisa08g0866 747 MobiDBLite consensus disorder prediction 1 41 - -
Bisa08g0866 747 CDD PHD_ARID4_like 680 731 - -
Bisa08g0866 747 CDD ARID 572 670 - -
Bisa08g0866 747 PANTHER AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN 4 7 746 IPR042293 -
Bisa08g0866 747 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 674 736 IPR013083 -
Bisa08g0866 747 SUPERFAMILY FYVE/PHD zinc finger 666 734 IPR011011 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa08g0866 Bisa-ChrBisa08 15542789 15550126 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa08g0866 2 746 ARID Transcription Factor Family AT3G43240 64.181 0.0 962
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR ARID Bisa08g0866 ARID 1e-13 CL0123