Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa08g0847 ATGGAACTCAAGCTCACAGCTCTGCAATCTGTTCTACTTCTGGTTGCTTTACTTGCTTTTCATGCACGCGCCTCCAATGTGACAGTCAGTGAGACGACTTGTGGTTACTTCAATGGTTCTCAGAAAAGAGACAGTAGAGAACCATGCCCAACTGGTTGGGTTGTTGCCCCCAATAAAGCCAAGTGCTTTTACCATGTTCAGAAGCTACAATCATGGAATGACTCAGAGGCCTGTTGTAATAAATATGGTGGACATTTAGCTTCTTTGCGATCACTTCCAGAACTACACTTTGCTCAGAGTGTATGTGGTGAAATTTTTAACAACTGCTGGGTTGGAGGAAGAATGTTTAACTCTACAGCTGGTTATAAGTGGACATGGTCTGACAATTCTCAATGGAATGAGTCCCTCTTTCCTTTGGCACTTGATACATTTAATTGTACTGGATTATCCTGCCCCATGAAAAGCACAATCAATTCATGTACCAGAATGACTAATCATTCGAATTCTCTCACGAGTGATAGCTGCGACAATCCCTATGCTTCTGTATGTGTACTTGATACTGATACAAAATGTTACCATATGCGCTGCCACAGGGAATACCTTATCATCCTTGCAGGAGTGAGTGCATTGATCCTCTGCACAACATTAGCTGTTGTGGTATGGCTTCTTGCACATAGGCGGAGCAAGAAGAGAAAACGGTCCAGAAAGCCATCTAATCCAGCAGCTACTCAATTAGTTCCTCCATCATGGAAAGTCTTCACCAAAGACGAATTAAGGTCTATTACAAAGAACTTCAGTGAAGGTAACCGTCTTGTTGGGGATGCCAAGACTGGCGGTACATACAGTGCAGTCCTACCTGATGGCTCAAAGGTTGCAGTCAAGAGATTAAAGAGGTCGACTTTTCAGAGAAAAAAGGAGTTCTATTCTGAAATTGGTAGGGTTGCAAGGCTTCGCCATCCAAATTTGGTGGCTGTGAAGGGATGCTGCTATGACCATGGTGACCGCTACATTGTCTATGAGTTTGTAGTTAATGGGCCTTTAGATAAATGGTTATATCATATACCAAGGGGAGGTCGCAGCTTAGATTGGGCTATGAGGATGAAAATTGCCACGACACTTGCCCAAGGAATTGCGTTTCTGCATGACAAAGTCAAACCACATGTTGTGCATCGGGATATACGAGCCAGTAATGTATTGCTGGATGAGGAGTTTGGTGCTCACCTTATGGGTGTTGGTCTATCCAAGTTTGTGCCATATGAAGTGATGCATGAGAGGACTGTAATGGCAGGTGGAACTTATGGATATCTTGCTCCAGAATTTGTGTACAGGAATGAGCTCACGACAAAGAGTGACGTTTACAGTTTTGGGGTCCTATTACTTGAAATAGTTAGTGGCCGTAGACCTGCCCAGGCAGTTGATTCAGTGGGTTGGCAGAGCATATTTGAATGGGCAACGCCCCTAGTGCAAGCGCATCGTTATCCAGAACTCTTGGATCCTCATATATCTTCATCATCATCTTCTAATATCCCAGAGGCTAGTACCATCCAGAAGGTGGTTGACCTTGTCTATTCTTGCACACAGCATGTTCCATCTATGCGCCCTAGAATGTCTCATGTTGTTCATCAGCTGCAACAATTCACACAGCCACCTGCAAAGTGA 1659 0.4406 MELKLTALQSVLLLVALLAFHARASNVTVSETTCGYFNGSQKRDSREPCPTGWVVAPNKAKCFYHVQKLQSWNDSEACCNKYGGHLASLRSLPELHFAQSVCGEIFNNCWVGGRMFNSTAGYKWTWSDNSQWNESLFPLALDTFNCTGLSCPMKSTINSCTRMTNHSNSLTSDSCDNPYASVCVLDTDTKCYHMRCHREYLIILAGVSALILCTTLAVVVWLLAHRRSKKRKRSRKPSNPAATQLVPPSWKVFTKDELRSITKNFSEGNRLVGDAKTGGTYSAVLPDGSKVAVKRLKRSTFQRKKEFYSEIGRVARLRHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDKWLYHIPRGGRSLDWAMRMKIATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPYEVMHERTVMAGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEIVSGRRPAQAVDSVGWQSIFEWATPLVQAHRYPELLDPHISSSSSSNIPEASTIQKVVDLVYSCTQHVPSMRPRMSHVVHQLQQFTQPPAK 552
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa08g0847 552 SMART tyrkin_6 265 543 IPR020635 GO:0004713|GO:0006468
Bisa08g0847 552 ProSitePatterns Tyrosine protein kinases specific active-site signature. 388 400 IPR008266 GO:0004672|GO:0006468
Bisa08g0847 552 Gene3D Phosphorylase Kinase; domain 1 224 341 - -
Bisa08g0847 552 SMART CLECT_2 49 184 IPR001304 -
Bisa08g0847 552 FunFam C-type lectin receptor-like tyrosine-protein kinase 243 341 - -
Bisa08g0847 552 Gene3D - 33 187 IPR016186 -
Bisa08g0847 552 ProSiteProfiles C-type lectin domain profile. 58 184 IPR001304 -
Bisa08g0847 552 ProSiteProfiles Protein kinase domain profile. 266 547 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa08g0847 552 Gene3D Transferase(Phosphotransferase) domain 1 342 548 - -
Bisa08g0847 552 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 107 545 - -
Bisa08g0847 552 SUPERFAMILY C-type lectin-like 33 186 IPR016187 -
Bisa08g0847 552 Pfam Protein tyrosine and serine/threonine kinase 287 543 IPR001245 GO:0004672|GO:0006468
Bisa08g0847 552 SUPERFAMILY Protein kinase-like (PK-like) 239 544 IPR011009 -
Bisa08g0847 552 FunFam C-type lectin receptor-like tyrosine-protein kinase At1g52310 342 552 - -
Bisa08g0847 552 Pfam Lectin C-type domain 70 184 IPR001304 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa08g0847 Bisa-ChrBisa08 15137482 15141980 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa08g0847 79 549 Receptor kinase-like Gene Family AT1G52310 68.908 0.0 644
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_C-LEC Bisa08g0847 PK_Tyr_Ser-Thr 2.1e-39 CL0016