Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa08g0843 ATGTCGGCTTGTTCACATAAAGAAAAAAGCTGTCTTGCTTTTGTTCAGCCTCTGGTTTCCCGGCGACAAGTCGTCATGAAGACTCTACCAAATGGTTACTTGCCTAATTCTGGCGAAGGAGAAAGAAAGACAATCAATTCTGAGTTATGGCATGCATGTGCTGGACCGTTGGTTTCTTTACCTCCTGTTGGAAGTCTTGTGGTTTACTTTCCTCAAGGACACAGCGAGCAAGTTGCAGCATCCATGCAAAAGGAGGCTGATATCGTGCCTAGTTACCCTAACCTTCCATCCAAGCTGATTTGCATGCTTCACAATGTTGCACTGCATGCTGATCCAGAAACTGACGAGGTCTATGCACAGATGACCCTTCAACCTGTAAACAAATATGACAAGGAAGCGAGACTGGCATCAGACATGGGTCTGAAGCAAAACCGACAACCTTCTGAGTTCTTCTGCAAAACTCTTACAGCTAGTGACACAAGCACTCACGGTGGATTTTCTGTACCTCGTAGAGCAGCGGAGAAAATATTTCCACCTTTGGATTTTTCAATGCAACCTCCTGCACAGGAGATTGTTGCCAAAGATTTGCATGACAATACATGGACATTCAGACACATCTATCGCGGACAACCAAAAAGGCATCTACTGACTACTGGTTGGAGTGTCTTTGTCAGCACAAAAAGACTATTTGCTGGAGATTCAGTTCTTTTTATTAGAGATGAAAAACAGCAACTGCTTTTAGGCATAAGGCGTGCTAATAGACAGCAGCCTGCTCTCTCGTCGTCAGTCATATCCAGTGACAGCATGCATATAGGCATTCTAGCTGCTGCAGCTCATGCTGCTGCAAATAACAGCCCGTTTACCGTATTTTACAATCCAAGGGCTAGCCCCTCTGAATTTGTTGTTCCGTTGGCCAAGTATAATAAAGCCATGTACACCCAAGTTTCTCCAGGAATGAGGTTCAGAATGATGTTTGAGACTGAGGAGTCGGGAGTACGCAGATACATGGGTACCATCACAGGAATAAGTGACCTGGATCCTGTGCGATGGAAAAGCTCGCAGTGGCGTAATCTTCAGGTTGGATGGGATGAATCAACAGCTGGTGAGCGCCCAAGCAGAGTTTCAAATTGGGACATTGAACCAGTAGTGACTCCTTTCTACATTTGCCCACCTCCTTTTTTCAGGCCCAAGTTCCCCAGGCAACCGGGAATGCCAGATGATGAGTTTGACATGGAGAATGCTTTCAAGAGATCTATGCCCTGGCTTGGAGATGATTTTGGCATGAAGGATGCCTCGAGTTCAATTTTTCCGGGTCTAAGTTTAGTTCAGTGGATGAGTATGCAACAGAATAATCAGCTTTCCGCTACTCAATCAGGGATTTTCCCACCCATGCATCCATCTAATTCCCTTCATAATAACCTCAGCGCTGATGATCCATCCAAATTATTGAGCTTTCAAGCCCCTGTCCTCTCTGCACCAAATCTTCAATTTAACAAACCTAATTTACCAAATCAAGTCAACCAATTGCAACAGGCCCCGTCATCGTGGCCTCAGCAGCAGCAGCAGCAGCTGCAGTCATTGTTGCAAACGCCCGTAAATCAGCTCCAGCAGCAGAGGCAGCAACAGCAGCTTCCTGAACCACAAAATCTTTCACATCAGCAGCAGCAACAACCACTGCAATTGCATCAACAGCGAGCACAGCAACCACAGCAGCAACAACAGCAGCAGTCATGCCAACAAGCCAGTATAAACAACGGGGTGGTTGGTTCTAGCCACATTCCAAATCAGAGTGTGCAGCAACCAGTAACCTACCCTCAGCTTCAGCAACAGCAATTACTCTCGGGCAGTATCCCGCTCCAGCAAAGTATCCAACCAGCTAGTAAGAGTACATTCCCCATCACAAACCTACAGCAAGATTCACAATTTCAGCAACAGATAGATCCGCAAGCTAGTCTCTTACAGAGGCAGCAACAACATTCCTCATTGCAGTTGTTGCAACAAAGCCTCACACAGATGGCACCGCAACAACCACAACAAATGGCTCAGCTGCCACAACAAAACCTTTCAGAGCAACAACTGCAGTCACAGTTGCTACAGAAATTGCAGCAACAGCAGCAACAACAGCAACTTCTTTCTCTAGCTGGTTCACTTTTGCAGCCTCAGCTGCTACAGCAACAGCAGGCCCACCAGCAAAACCAGCAGCTACCACAGCTACCTTTATCTCAGAATCAGCCTCAACAGCTCAGGAACAGCACGTTCTCGGCAGAGAAGCTTCTGAACTGCAACGGCTTTTCTTCACCTATGGTGCAACCACAACAGCTTCCTTTGAATCAACCCCAGAACACACAGAAACCGCTAATGACTACCAGAGCTCCTTCTAGTCTTACAGATGGAGATGCCCCATCGTGTTCAACCTCACCATCAACTAATAACTGCCAGGTATCTCCACCAAACCTCCTGAAGAGAAATCAACAAGTGTCGGTTACATTAGAGGGGAGCATGGTAGTTGAGCCCACTAGTAATCTGGTACAGGAGCTTCAGAGCAAGTCTGACATCCAGATCAAACATGAGTTACCAGGTGTAAAAGGACCTGACCAGCTAAAGTATAAAGGAACAATAACTGATCAGCTGGAAGCTTCTTCTTCTGGAACATCTTACTATCTTGATCCTTGCAGCGTGCAGCCAAACTTCCCACTTCCTAACTTCTGCATGGATGGGGATGTCCAATCGCATCCCAGGAACAATCTACCGTTTGCCTCTAACCCTGATGGGCTAACACCTGATACTTTGCTTTCAAGAGGGTATGACTCTCAAAAAGATCTTCAAAATTTGCTCTCTAATTATGGTGGTGCTCCAAGAGACATTGAAACTGAGCTTTCAACTGCTGCCATCAGCTCTCAGTCATTTGGTGTGCCAAGCATGCCCTTTAAGCCCGGTTGCTCAAGTGATGTTGCCATCAATGAAACCGGGGTGCTGAATAATGGCTTGTGGACTAACCAGGCTCAGCGAATGCGAACATATACCAAGGTTCAAAAGCGAGGCTCTGTTGGAAGATGCATTGATGTCACCCGTTACAAGGGATATGATGAACTCCGGCATGACTTGGCTCGGATGTTTGGGATTGAAGGGCAACTAGAAGATCCTCAAAGGACTGACTGGAAACTAGTATACGTGGATCATGAAAATGACATTCTTCTTGTTGGTGATGACCCTTGGGAAGAATTTGTAAGCTGTGTCCAGAGCATAAAGATACTGTCATCTGCTGAAGTGCAGCAAATGAGCTTGGATGGGGATTTAGGTAATGTTCCAATCTCCAATCAAGCTTGCAGTGGGACAGATAGTGGCAACGCCTGGAGGGGACAGTATGACGACAATTCTGCTGCCTCATTTAATCGATGA 3399 0.4637 MSACSHKEKSCLAFVQPLVSRRQVVMKTLPNGYLPNSGEGERKTINSELWHACAGPLVSLPPVGSLVVYFPQGHSEQVAASMQKEADIVPSYPNLPSKLICMLHNVALHADPETDEVYAQMTLQPVNKYDKEARLASDMGLKQNRQPSEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQEIVAKDLHDNTWTFRHIYRGQPKRHLLTTGWSVFVSTKRLFAGDSVLFIRDEKQQLLLGIRRANRQQPALSSSVISSDSMHIGILAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYNKAMYTQVSPGMRFRMMFETEESGVRRYMGTITGISDLDPVRWKSSQWRNLQVGWDESTAGERPSRVSNWDIEPVVTPFYICPPPFFRPKFPRQPGMPDDEFDMENAFKRSMPWLGDDFGMKDASSSIFPGLSLVQWMSMQQNNQLSATQSGIFPPMHPSNSLHNNLSADDPSKLLSFQAPVLSAPNLQFNKPNLPNQVNQLQQAPSSWPQQQQQQLQSLLQTPVNQLQQQRQQQQLPEPQNLSHQQQQQPLQLHQQRAQQPQQQQQQQSCQQASINNGVVGSSHIPNQSVQQPVTYPQLQQQQLLSGSIPLQQSIQPASKSTFPITNLQQDSQFQQQIDPQASLLQRQQQHSSLQLLQQSLTQMAPQQPQQMAQLPQQNLSEQQLQSQLLQKLQQQQQQQQLLSLAGSLLQPQLLQQQQAHQQNQQLPQLPLSQNQPQQLRNSTFSAEKLLNCNGFSSPMVQPQQLPLNQPQNTQKPLMTTRAPSSLTDGDAPSCSTSPSTNNCQVSPPNLLKRNQQVSVTLEGSMVVEPTSNLVQELQSKSDIQIKHELPGVKGPDQLKYKGTITDQLEASSSGTSYYLDPCSVQPNFPLPNFCMDGDVQSHPRNNLPFASNPDGLTPDTLLSRGYDSQKDLQNLLSNYGGAPRDIETELSTAAISSQSFGVPSMPFKPGCSSDVAINETGVLNNGLWTNQAQRMRTYTKVQKRGSVGRCIDVTRYKGYDELRHDLARMFGIEGQLEDPQRTDWKLVYVDHENDILLVGDDPWEEFVSCVQSIKILSSAEVQQMSLDGDLGNVPISNQACSGTDSGNAWRGQYDDNSAASFNR 1132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa08g0843 1132 FunFam Auxin response factor 149 253 - -
Bisa08g0843 1132 Pfam Auxin response factor 277 359 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Bisa08g0843 1132 FunFam Auxin response factor 314 386 - -
Bisa08g0843 1132 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 41 608 IPR044835 GO:0003677|GO:0006355|GO:0009725
Bisa08g0843 1132 Pfam AUX/IAA family 1002 1091 IPR033389 -
Bisa08g0843 1132 CDD B3_DNA 150 242 IPR003340 GO:0003677
Bisa08g0843 1132 MobiDBLite consensus disorder prediction 456 475 - -
Bisa08g0843 1132 FunFam Auxin response factor 1000 1094 - -
Bisa08g0843 1132 Gene3D - 149 252 IPR015300 -
Bisa08g0843 1132 Pfam B3 DNA binding domain 151 252 IPR003340 GO:0003677
Bisa08g0843 1132 SUPERFAMILY DNA-binding pseudobarrel domain 141 280 IPR015300 -
Bisa08g0843 1132 MobiDBLite consensus disorder prediction 494 579 - -
Bisa08g0843 1132 Gene3D - 314 385 - -
Bisa08g0843 1132 SUPERFAMILY CAD & PB1 domains 1018 1083 - -
Bisa08g0843 1132 SMART B3_2 151 253 IPR003340 GO:0003677
Bisa08g0843 1132 MobiDBLite consensus disorder prediction 764 817 - -
Bisa08g0843 1132 ProSiteProfiles PB1 domain profile. 1005 1098 IPR000270 GO:0005515
Bisa08g0843 1132 ProSiteProfiles B3 DNA-binding domain profile. 151 253 IPR003340 GO:0003677
Bisa08g0843 1132 Gene3D - 1000 1094 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa08g0843 Bisa-ChrBisa08 15061662 15069288 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa08g0843 26 512 B3 DNA Binding Superfamily AT1G19220 83.162 0.0 838
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Bisa08g0843 AUX_IAA 2.2e-09 CL0072
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa08g0843 08 15061662 15069288 Bisa08g0843 08 15061662 15069288 ECH