Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa08g0842 ATGGGATGGGCTCGGACCCAAGTGCGACGGGACAGGTGTCATGATCATGAAGCAAATGGGTCCATGCGAGGGAGAACTCAGAGGTTTTATATTCATTTTCTCCAGCGCTACTTCCTCCACTCTCAAAGCTCAGCCTCTAATTCGAATCTTCGAAGCTCACTTCCGATTAAGGCAGTAGACGCTCCAATGGCAACCGCTCAGCTCACAGCATCATCACTTTCTACTTTGAATTTGCCATCATTCGAAGGTCTTCGTCCTTCACCAATTCAATTTTCTTCTGTCGGACATGTAAGAATAGGTGGTCTTACCCAGAGGTCGTTCCGGGGTTTAGTTGTCAAAGCCGCTACGGTCGTAGCCCCCAAGTACACCTCTATTAAGCCTTTGGGTGACAGAGTTCTGGTAAAAATTAAGGAGGCTGAGGAGAAGACTGAGAGTGGGATCTTACTTCCCACGACTGCTCAAACAAAGCCTCAAGGGGGCGAAGTGATGGCTATTGGAGAGGGAAAGAAAGTAGGGAAGAGCAAAGTGGACATTTCTGTGAAGATAGGCGCACAAGTTGTGTATTCAAAGTATGCAGGGACTGAGGTGGAGTTCAATGGTTCAAAGCATCTTATAGTGAAAGATGATGACATTGTTGGTATCCTTGAAACAGAAGATGTCAAGGATCTTAAACCTTTAAATGATAGAGTCTTAATCAAGGTTGCAGAAGCTGAGGAAAAAACTGCAGGGGGTTTGTTGCTGACAGAGGCAACAAAAGAGAAACCATCTATTGGAACGGTGATAGCTGTTGGACCAGGGCCTCTAGACGAGGAAGGCAACAGAAAACCGTTGTCCATTAGTCCTGGGAATACTGTTCTGTATTCCAAATATGCAGGGAATGACTTCAAGGGCAAAGATGGTTCTGAATACATTGCCTTGAGGGTCTCAGATGTCATGGCTGTCCTATCCTAA 951 0.4595 MGWARTQVRRDRCHDHEANGSMRGRTQRFYIHFLQRYFLHSQSSASNSNLRSSLPIKAVDAPMATAQLTASSLSTLNLPSFEGLRPSPIQFSSVGHVRIGGLTQRSFRGLVVKAATVVAPKYTSIKPLGDRVLVKIKEAEEKTESGILLPTTAQTKPQGGEVMAIGEGKKVGKSKVDISVKIGAQVVYSKYAGTEVEFNGSKHLIVKDDDIVGILETEDVKDLKPLNDRVLIKVAEAEEKTAGGLLLTEATKEKPSIGTVIAVGPGPLDEEGNRKPLSISPGNTVLYSKYAGNDFKGKDGSEYIALRVSDVMAVLS 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa08g0842 316 FunFam 20 kDa chaperonin, chloroplastic 118 217 - -
Bisa08g0842 316 MobiDBLite consensus disorder prediction 1 20 - -
Bisa08g0842 316 ProSitePatterns Chaperonins cpn10 signature. 223 247 IPR018369 GO:0005524|GO:0006457
Bisa08g0842 316 Pfam Chaperonin 10 Kd subunit 125 214 IPR020818 GO:0005524|GO:0006457|GO:0044183
Bisa08g0842 316 Pfam Chaperonin 10 Kd subunit 223 314 IPR020818 GO:0005524|GO:0006457|GO:0044183
Bisa08g0842 316 CDD cpn10 124 215 IPR020818 GO:0005524|GO:0006457|GO:0044183
Bisa08g0842 316 Hamap Co-chaperonin GroES [groES]. 124 216 IPR020818 GO:0005524|GO:0006457|GO:0044183
Bisa08g0842 316 PRINTS 10kDa chaperonin signature 147 168 IPR020818 GO:0005524|GO:0006457|GO:0044183
Bisa08g0842 316 PRINTS 10kDa chaperonin signature 202 215 IPR020818 GO:0005524|GO:0006457|GO:0044183
Bisa08g0842 316 PRINTS 10kDa chaperonin signature 125 140 IPR020818 GO:0005524|GO:0006457|GO:0044183
Bisa08g0842 316 PRINTS 10kDa chaperonin signature 181 193 IPR020818 GO:0005524|GO:0006457|GO:0044183
Bisa08g0842 316 SMART Cpn10_2 124 215 IPR020818 GO:0005524|GO:0006457|GO:0044183
Bisa08g0842 316 SMART Cpn10_2 222 315 IPR020818 GO:0005524|GO:0006457|GO:0044183
Bisa08g0842 316 FunFam 10 kDa chaperonin 220 316 - -
Bisa08g0842 316 SUPERFAMILY GroES-like 123 216 IPR011032 -
Bisa08g0842 316 PANTHER 10 KDA HEAT SHOCK PROTEIN 122 214 IPR020818 GO:0005524|GO:0006457|GO:0044183
Bisa08g0842 316 ProSitePatterns Chaperonins cpn10 signature. 125 149 IPR018369 GO:0005524|GO:0006457
Bisa08g0842 316 Gene3D GroES chaperonin 117 217 IPR037124 GO:0006457
Bisa08g0842 316 Gene3D GroES chaperonin 218 316 IPR037124 GO:0006457
Bisa08g0842 316 CDD cpn10 223 315 IPR020818 GO:0005524|GO:0006457|GO:0044183
Bisa08g0842 316 Hamap Co-chaperonin GroES [groES]. 222 316 IPR020818 GO:0005524|GO:0006457|GO:0044183
Bisa08g0842 316 SUPERFAMILY GroES-like 222 315 IPR011032 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa08g0842 Bisa-ChrBisa08 15050906 15060730 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa08g0842 63 316 Calmodulin-binding Proteins AT5G20720 75.781 1.92e-134 380
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa08g0842 08 15050906 15060730 Bisa08g0842 08 15050906 15060730 ECH