Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa08g0834 ATGGCCGCTGTTCTCTCCCCTCTCTTCTTCTTCTTCCTCCTCCTCACGCTTTATTCTTTGTCTTCCCCTTCCTTCTCCCTCTCCGACGCCGAAGCTCTCCTCAAGTTTAAGCAGTCCTTGTCCAATGCTGGCGCTCTCTCTTCTTGGGTCCCCAATTCCAATCCTTGCTCGGCCGGGTGGGAGGGAGTCTTTTGCAATAAAAACTCCGTTGCCGGGCTTCGCCTCTCCGATATGGGACTTTCTGGGAATATCGACATCAAGGCTCTGATGGAGATCAAAGGCCTTCGAACCATCAGCTTGGCCAACAATTCCTTCTCCGGACCCATCCCAGACTTGCACAAACTCGGCGTTCTCAAGGCTGTATACCTATCGGATAACCAATTCTCCGGCATGATTCCTGCGGACTACTTCTCCTTCTTGGATTCACTCAAGAAAGTCTGGCTCGAGCGCAACAAATTCACCGGAAACATTCCCAGTTCGCTGGCGAGTTTAGCCATGCTCCAAGAGATTCACCTCGAGAACAACGAATTCTCAGGGCCCATCCCTGCTTTGAAACAGGACATCAAATCTTTAAACATGTCGAACAATAAATTGCAGGGTCCGATCCCGGAGAGCCTATCCGGATACGGATCCGATGCTTTCAAGGGAAACGACGGTCTCTGCGGGAAGCCTTTGGAAAAGCCATGCGAGCAGGTCCCTCCACAGAAGCAGGACGAGAATAAGGAGCCAAGACACGCCATCAAGGTCATCATGATCTTCTTATGCGTCATCATCGTGATCCTGCTCTTCGTGGCGATCAGGTCCTCCCGGCTTCGCCGCCACGACGAGTTCCGCACGCTGAGCAGGGACAGCAACGGCGAGATGGTCCAAGTGCGCGTAGCGAGCTCGACGAAGAACAGGGTAGCGGAAGCAGGGAAGAAGATGAAGAGCAGCATGAGGAGGGGGTCGACGAAGAAGGGGCACGGCGATCTGACGTTGGTGTGCGAGGAGAAGGGGATGTTTGGGATGCCGGATCTGATGAAGGCGGCGGCGGAGGTGCTGGGGAACGGGGCGTTGGGGTCGGCGTACAAGGCGGCGCTGGGGAGCGGGCTGTGCGTGGTGGTGAAGAGGATGAGGGACGTGAGTCAGATTGGGAGGAGTTCGTTTGATACGAAGTTGAGAACTTTTGGGAAACTGAAACACCCCAATGTATTGACGCCTCTGGCTTACCATTTTCGGAAGGAGGAGAAGCTCATTGTGTCGGAGTACGTCCCCAATGGAAGCTTGTTGTTTGTCTTGCACGGTGACAGGGGAACGCACCATAGTGAGCTCACCTGGCCCGTTCGTCTGAGGATCATTAAAGGAGTGGCACGAGGGCTGGGGTACCTGCACGCTCAATTCCCCTCCCACGACCTTCCCCATGGCAACCTCAAGTCCAGCAACGTCCTCCTCTCCCACACCTACGATCCCCTCCTCTCCGACTTCGCCTTCCTGTCCCTCCTCAATCCCAACGCCGTCCAGTCTCTCTTCGCCTTCAACACCCCCGATTTCATTCAGTACCAGAAGGTGAACCAGAAGACCGACGTGTACTGCCTCGGAGTTATCATGCTCGAGATCATCACCGGCAAGTTCCCTTCTCAGTATCACAGCAGTGGAAAGGGTGGGACTGATGTGGTGCAGTGGGTGTTGACTGCCATTTCTGAGAGAAGAGAAGCGGAGGTGGTTGATCCTCAGATAGGGACGAACTCCAATTCATTGGATCAGATGCTGAAACTTTTACAGATTGGGGCTGCCTGCACTGAGAGTAATCCGGAGCAACGGATTCACCTGGGTGAAGCCATTAGGAGGATAGAAGAGGTGCATGAGTGA 1848 0.5433 MAAVLSPLFFFFLLLTLYSLSSPSFSLSDAEALLKFKQSLSNAGALSSWVPNSNPCSAGWEGVFCNKNSVAGLRLSDMGLSGNIDIKALMEIKGLRTISLANNSFSGPIPDLHKLGVLKAVYLSDNQFSGMIPADYFSFLDSLKKVWLERNKFTGNIPSSLASLAMLQEIHLENNEFSGPIPALKQDIKSLNMSNNKLQGPIPESLSGYGSDAFKGNDGLCGKPLEKPCEQVPPQKQDENKEPRHAIKVIMIFLCVIIVILLFVAIRSSRLRRHDEFRTLSRDSNGEMVQVRVASSTKNRVAEAGKKMKSSMRRGSTKKGHGDLTLVCEEKGMFGMPDLMKAAAEVLGNGALGSAYKAALGSGLCVVVKRMRDVSQIGRSSFDTKLRTFGKLKHPNVLTPLAYHFRKEEKLIVSEYVPNGSLLFVLHGDRGTHHSELTWPVRLRIIKGVARGLGYLHAQFPSHDLPHGNLKSSNVLLSHTYDPLLSDFAFLSLLNPNAVQSLFAFNTPDFIQYQKVNQKTDVYCLGVIMLEIITGKFPSQYHSSGKGGTDVVQWVLTAISERREAEVVDPQIGTNSNSLDQMLKLLQIGAACTESNPEQRIHLGEAIRRIEEVHE 615
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa08g0834 615 Pfam Leucine rich repeat N-terminal domain 28 66 IPR013210 -
Bisa08g0834 615 Gene3D Ribonuclease Inhibitor 28 186 IPR032675 -
Bisa08g0834 615 Gene3D Transferase(Phosphotransferase) domain 1 417 615 - -
Bisa08g0834 615 MobiDBLite consensus disorder prediction 300 321 - -
Bisa08g0834 615 SMART serkin_6 341 610 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa08g0834 615 Pfam Protein kinase domain 345 606 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa08g0834 615 ProSiteProfiles Protein kinase domain profile. 341 615 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa08g0834 615 FunFam Nuclear pore complex protein NUP107 26 183 - -
Bisa08g0834 615 Gene3D Phosphorylase Kinase; domain 1 306 416 - -
Bisa08g0834 615 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 13 614 IPR046959 -
Bisa08g0834 615 MobiDBLite consensus disorder prediction 302 321 - -
Bisa08g0834 615 SUPERFAMILY Protein kinase-like (PK-like) 345 609 IPR011009 -
Bisa08g0834 615 SUPERFAMILY L domain-like 26 209 - -
Bisa08g0834 615 Gene3D Ribonuclease Inhibitor 189 229 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa08g0834 Bisa-ChrBisa08 14837303 14840187 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa08g0834 1 613 Receptor kinase-like Gene Family AT3G42880 49.216 0.0 627
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Bisa08g0834 Pkinase 9.4e-25 CL0016