Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa08g0780 ATGTTAAAAAGGGTAGCTTCTGGACTGTTGATTTCCTCCCTCCTCATATGTGTATCTGCAACGGATAATGGATTCCCCAGATGTAACTGTGATGATGAGGCCAGCCTGTGGACTATCGAGAGCATTCTGGAGTGCCAGAGAGTCGGCGATTTCCTGATTGCCGTGGCCTATTTCTCCATACCCATTGAGCTGCTTTATTTTATCAGTTGCTCAAACGTTCCATTCAAATGGGTACTTATTGAGTTCATTGCCTTCATTGTACTATGTGGAATGACACATATGCTGAATGGCTGGACTTATGGCCCTCACTCTTTTCAACTCATGGTGGCACTCACTGTCTTCAAAATTCTCACTGCTTTGGTGTCATGTGCCACTGCTATCACCCTCATCACTCTCATTCCTTTGCTTCTCAAAGTGAAGGTCAGAGAATTTATGCTGAAGAAAAAGACTTGGGATCTTGGACGAGAGGTTGGTCTTATAATGAAACAAAAGGAAGCTGCGATGCATGTAAGAATGCTCACTCAAGAGATTCGCAAGTCACTTGATAGGCATACAATTCTGTACACCACCCTGGTCGAGCTGTCTAAAACACTGGGTTTGCAAAATTGTGCAGTTTGGATGCCTAATGTTGATAAAACAGAGATGAACCTGACTCATGAATTAAATGGAAGGAATTTTAATTTCTCTGTACCCATTACCGATCCAGATATTTTAAAAATCAAGGGAAGTGATAGCGTAAATATTCTTAGACCTGACTCAGCACTTGCTGCTGCCAGTTGTGGAGTTTCAGGTGAGCCTGGACCAGTAGCTGCAATTCGAATGCCAATGCTTCGGGTTTGCAATTTCAAAGGGGGGACACCTGAGCTAACACAGGCATGTTATGCAATTCTAGTTTTAATTCTTCCGAGTGGAGAACCTAGATCTTGGAGCAATTATGAGCTGGAGATTATTAAGGTGGTAGCTGATCAGGTAGCTGTGGCTCTCTCTCATGCTGCAATTCTTGAAGAGTCCCAACTCATGCGAGAGAAGTTGGAGGAGCAAAATCGAGCTTTGCAACAGGCAAAAAGGAATGCGATGATGGCAAGTCAGGCAAGAAACTCATTTCAGAAGGTCATGAGTGATGGAATGAGGAGGCCAATGCACTCAATTTTAGGTTTGCTGTCAATGATGGGAGATGAGAATTTAAAGAGTGAACAAAAACTTATTGTGGATGCAATGCTGAGGACCAGCAATGTTCTTTCAAACTTGATAAATGATGCCATGGATATTTCAGCAAAGGATGATGGACGATTTCAACTGGAGATGAGATCTTTTGGGTTACATGCCATGATAAAAGAGGCAGCTTGCCTTGCCAAGTGCATGTCTGTTTATAAGGGTTTTGGTTTTATGGTCGACGTTGACAAGTCATTGCCTGACAATGTTATGGGTGATGAGAGGAGGGTCTTTCAGGTGATTTTGCATATGGTTGGGAACCTGCTGGATGGTAATCATGGGGGAGAGATTCTTGTGCTTCGGGTTTTTGCAGAAAGTGGAAGTCAGGGAAGGAATGAACAGGGGTGGTCAAGCTGGAGACCAAGCTCGTCTAGTGGGGATGTATATATTAGATTTGAGGTAGGGATCAAAGTAAGTAATTCTGAATTGGAGGGCTCAGTTTCTTTAGGACAGCTTGGTGTTAGGAAGTACACCAGTGGCAGTGATAGAGTTGATGGCAGATTGAGCTTCAGTGTCTGCAAGAGGATTGTTCAGCTGATGCAAGGAAACATATGGTTAATGCCAAATACTCAAGGTTGTCCTCAGAACATGGCCCTTGTTCAACGGTTTCAATTGCGACCTTCCATTGTTATAGCCATCTCTGAACCAGGAGAATCTTCAGAGCTTACAGATTCTAATTCCCTCTTTCGTGGTCTGCATGTCTTGTTGGCCGACAGCGATGATGTAAATAGAGCTGTGACCCAGAAATTGCTTCAGAAGCTAGGTTGCACTGTAACCTCTGTTTCTTCAGGATTTGAATGCCTCACTGTCTGTGGACCTGCTGGGTCTTCTGTACAAGTCATTCTTTTGGATCTTCATATGCCGGAGTTAGACGGCTTCGAAGTTGCCACTAGGATTCGGAAGTTCAGAAGCCGAAACTGGCCTGTGATTGTCGCCTTCACTGCAAGTGCAGACGAAGACTTGTGGGAAAGATGTGCACAAACCGGTATTAATGGAGTCATCCGGAAGCCGGTTTTGATGCAAGGAATTGCCTCTGAACTTAGAAGAATCCTGAGGCAAGGAAGTTAG 2280 0.4408 MLKRVASGLLISSLLICVSATDNGFPRCNCDDEASLWTIESILECQRVGDFLIAVAYFSIPIELLYFISCSNVPFKWVLIEFIAFIVLCGMTHMLNGWTYGPHSFQLMVALTVFKILTALVSCATAITLITLIPLLLKVKVREFMLKKKTWDLGREVGLIMKQKEAAMHVRMLTQEIRKSLDRHTILYTTLVELSKTLGLQNCAVWMPNVDKTEMNLTHELNGRNFNFSVPITDPDILKIKGSDSVNILRPDSALAAASCGVSGEPGPVAAIRMPMLRVCNFKGGTPELTQACYAILVLILPSGEPRSWSNYELEIIKVVADQVAVALSHAAILEESQLMREKLEEQNRALQQAKRNAMMASQARNSFQKVMSDGMRRPMHSILGLLSMMGDENLKSEQKLIVDAMLRTSNVLSNLINDAMDISAKDDGRFQLEMRSFGLHAMIKEAACLAKCMSVYKGFGFMVDVDKSLPDNVMGDERRVFQVILHMVGNLLDGNHGGEILVLRVFAESGSQGRNEQGWSSWRPSSSSGDVYIRFEVGIKVSNSELEGSVSLGQLGVRKYTSGSDRVDGRLSFSVCKRIVQLMQGNIWLMPNTQGCPQNMALVQRFQLRPSIVIAISEPGESSELTDSNSLFRGLHVLLADSDDVNRAVTQKLLQKLGCTVTSVSSGFECLTVCGPAGSSVQVILLDLHMPELDGFEVATRIRKFRSRNWPVIVAFTASADEDLWERCAQTGINGVIRKPVLMQGIASELRRILRQGS 759
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa08g0780 759 PIRSF Ethylen_sen_hybr_HK 1 759 IPR014525 GO:0004672|GO:0005789|GO:0009723|GO:0038199|GO:0051740
Bisa08g0780 759 SMART REC_2 636 755 IPR001789 GO:0000160
Bisa08g0780 759 Pfam GAF domain 182 328 IPR003018 GO:0005515
Bisa08g0780 759 Gene3D - 336 429 - -
Bisa08g0780 759 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 476 590 IPR003594 -
Bisa08g0780 759 Gene3D - 636 759 - -
Bisa08g0780 759 FunFam Ethylene receptor 634 758 - -
Bisa08g0780 759 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 418 592 IPR036890 -
Bisa08g0780 759 PANTHER TWO-COMPONENT SENSOR HISTIDINE KINASE 25 757 - -
Bisa08g0780 759 SUPERFAMILY Homodimeric domain of signal transducing histidine kinase 349 430 IPR036097 GO:0000155|GO:0007165
Bisa08g0780 759 Pfam Response regulator receiver domain 638 747 IPR001789 GO:0000160
Bisa08g0780 759 SMART gaf_1 182 338 IPR003018 GO:0005515
Bisa08g0780 759 CDD REC_ETR-like 636 751 - -
Bisa08g0780 759 CDD HisKA 362 424 IPR003661 GO:0000155|GO:0007165
Bisa08g0780 759 ProSiteProfiles Response regulatory domain profile. 637 755 IPR001789 GO:0000160
Bisa08g0780 759 Coils Coil 334 364 - -
Bisa08g0780 759 FunFam Ethylene receptor 4 331 425 - -
Bisa08g0780 759 SUPERFAMILY GAF domain-like 185 331 - -
Bisa08g0780 759 Gene3D - 169 335 IPR029016 -
Bisa08g0780 759 SMART HisKA_10 364 429 IPR003661 GO:0000155|GO:0007165
Bisa08g0780 759 SUPERFAMILY CheY-like 633 756 IPR011006 -
Bisa08g0780 759 CDD HATPase_ETR2_ERS2-EIN4-like 470 604 - -
Bisa08g0780 759 Gene3D - 430 598 IPR036890 -
Bisa08g0780 759 Pfam His Kinase A (phospho-acceptor) domain 365 428 IPR003661 GO:0000155|GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa08g0780 Bisa-ChrBisa08 13815465 13818634 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa08g0780 22 759 Miscellaneous Gene Families AT3G04580 58.400 0.0 845
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Bisa08g0780 HATPase_c 1.1e-06 CL0025