Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa08g0778 ATGGAGAGAAACAGTTTGAGCACCAGCTTGAAAGACCATCTCCTGCATAGTGCTGTCAACAGCAGCAGCAACAAGAACCAAATGATAAAAGAATCTTGGGACTGCAATAACTCTAAGATCAGCAATGGAGGAGATGAGTACATGAATGGATTCTCATGGCCTCCAAGATCATACACTTGCAGCTTCTGCAGGAGAGAATTCAGATCTGCTCAAGCTCTTGGTGGCCACATGAATGTGCATAGGAGGGACAGAGCCAGGCTCAGGCAGTCTCCTCCTCCAACTACAACTGATCATGGTTACTCCCACATGCTCAACCTTAACCTTAACCCTACCTCTGGCCCTAGCTTTTCAACCTCAACTTTGTCCTTATTATCATCTCCTCCTTCTTCTTCCACGTTGCTCAAAAAGCCATTCACTACTAACAACTTGCCCTCATTGGTTTCTCCTACTCTTTCTTCTTCATCTTCCCCGCCCTCTGACTCTCTTCCTTCTGAGTTGAAAAATTGGGTTGTGGATGGCATCTTGTTGAACCCGTTGAGCACAAATGCCTCGGAGTCCACAAAATTGAAAAATGCAGATTCTTTATCTGGGTTCAGAGAATATGATGATGATGGGTGCAAAGTGTTGAAGAAGGCTGAGATCATTAGGTTGGACTTGGAGATAGGGTTGCTTAGTGATTCCAGGGATGATTTAGATCTGGAGCTTCGATTGGGTACTTACTCTTAG 726 0.449 MERNSLSTSLKDHLLHSAVNSSSNKNQMIKESWDCNNSKISNGGDEYMNGFSWPPRSYTCSFCRREFRSAQALGGHMNVHRRDRARLRQSPPPTTTDHGYSHMLNLNLNPTSGPSFSTSTLSLLSSPPSSSTLLKKPFTTNNLPSLVSPTLSSSSSPPSDSLPSELKNWVVDGILLNPLSTNASESTKLKNADSLSGFREYDDDGCKVLKKAEIIRLDLEIGLLSDSRDDLDLELRLGTYS 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa08g0778 241 Gene3D Classic Zinc Finger 54 101 - -
Bisa08g0778 241 ProSitePatterns Zinc finger C2H2 type domain signature. 60 80 IPR013087 -
Bisa08g0778 241 ProSiteProfiles Zinc finger C2H2 type domain profile. 58 85 IPR013087 -
Bisa08g0778 241 Pfam C2H2-type zinc finger 58 82 - -
Bisa08g0778 241 SMART c2h2final6 58 80 IPR013087 -
Bisa08g0778 241 MobiDBLite consensus disorder prediction 81 101 - -
Bisa08g0778 241 SUPERFAMILY beta-beta-alpha zinc fingers 55 84 IPR036236 -
Bisa08g0778 241 PANTHER OS07G0101800 PROTEIN 31 239 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa08g0778 Bisa-ChrBisa08 13686476 13687201 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa08g0778 46 238 C2H2 Transcription Factor Family AT3G23130 41.500 8.38e-35 122
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Bisa08g0778 zf-C2H2_6 4.1e-06 CL0361