Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa08g0772 ATGGATCATGGGCAGAGGGGGATGATGATGAGGCAGGAGAAGGATGAGAAGGCGAGGGAGGAGGTCCGGTACCGGGGTGTGCGGAGGCGGCCGTGGGGGAAGTACGCGGCGGAGATAAGGGACCCGTCGAAGCAAGGGGCGAGGCTGTGGCTGGGGACGTTTGATACGGCGGAGGAAGCAGCGAGAGCATATGATAGGGCTGCCTTCAACTTGAGGGGTCATCTTGCAATTCTCAATTTCCCTAATGAGTACTATGCTCAAGTGAGAGGTTCACCGCCTTATCCTCCCTATTTGGCGGCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCATCCTTTCGTGGCCATGGCACGGGAAGCTCGTCGACGTCTGGTTCGCGTCAGGGGCAAGTGTTTGAGCTGGAGTGTTTGCCTAATCAGGTGCTGGAAGACCTTCTTGAATCTGAAGAGGAGAAAAAGAATAGGATGGGTTAA 489 0.5358 MDHGQRGMMMRQEKDEKAREEVRYRGVRRRPWGKYAAEIRDPSKQGARLWLGTFDTAEEAARAYDRAAFNLRGHLAILNFPNEYYAQVRGSPPYPPYLAASSSSSSSSSSSSSSSSSFRGHGTGSSSTSGSRQGQVFELECLPNQVLEDLLESEEEKKNRMG 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa08g0772 162 SMART rav1_2 23 87 IPR001471 GO:0003700|GO:0006355
Bisa08g0772 162 PRINTS Ethylene responsive element binding protein signature 47 63 IPR001471 GO:0003700|GO:0006355
Bisa08g0772 162 PRINTS Ethylene responsive element binding protein signature 24 35 IPR001471 GO:0003700|GO:0006355
Bisa08g0772 162 MobiDBLite consensus disorder prediction 1 22 - -
Bisa08g0772 162 FunFam Ethylene-responsive transcription factor 2 22 82 - -
Bisa08g0772 162 Gene3D AP2/ERF domain 22 82 IPR036955 GO:0003700|GO:0006355
Bisa08g0772 162 ProSiteProfiles AP2/ERF domain profile. 23 81 IPR001471 GO:0003700|GO:0006355
Bisa08g0772 162 MobiDBLite consensus disorder prediction 91 135 - -
Bisa08g0772 162 MobiDBLite consensus disorder prediction 97 135 - -
Bisa08g0772 162 Pfam AP2 domain 23 74 IPR001471 GO:0003700|GO:0006355
Bisa08g0772 162 CDD AP2 23 82 IPR001471 GO:0003700|GO:0006355
Bisa08g0772 162 PANTHER DNA-BINDING DOMAIN 14 152 IPR044808 GO:0003700|GO:0009873
Bisa08g0772 162 SUPERFAMILY DNA-binding domain 23 82 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa08g0772 Bisa-ChrBisa08 13613605 13614093 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa08g0772 20 158 AP2-EREBP Transcription Factor Family AT3G23230 61.151 7.84e-49 152
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Bisa08g0772 AP2 6e-17 CL0081