Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa08g0747 ATGGTGAGAGCTCCTTGCTGTGAAAAGATGGGATTGAAGAAGGGTTCATGGACTCCTGAGGAAGATCAAATCCTGATCTCTTATATTCAGGAACATGGCCATGGCAACTGGCGTGCCCTCCCTAAGCAAGCAGGCCTTCTGAGATGTGGGAAGAGCTGCAGATTGCGGTGGATCAACTACTTGAGGCCAGATATCAAGAGAGGGAACTTCACAGTAGAAGAAGAAGAAACTATAATCAAGCTGCATGAGATGCTGGGCAACAGGTGGTCAGCAATTGCAGCTAAGTTACCAGGAAGAACAGACAACGAGATAAAAAATGTGTGGCACACCCACTTGAAGAAGAGGCTTCTCAAAACAAGCCAACCCATCAATTCAGATAAGAAAACCAGAGGATCCAAGACCAAGCCATCAATCAAACGATCAGATTCCAATTCCAGCACAGTGACTTCTCAATCAGAACCCACCAGTTTCATCAGCTTCCCTGAAAAGGACTCTGCTTCAGTTTCAGCATGCACCACTTCATCCAGTGATTTCTCGTCGTCTCTGCTCACAGTAGGAGAAAGCAAGAACATGGAGATAATGGAGATCAAGAGTGAAGACATGGACTCTCTGGAGACGATATTGCCTGAGATTTATGAAAGCTTCTGGTCAGAAACAGCAATGGAGGATAATGGCCATACCACCACAAACAATGAACTTCATCAATACCCTTTTGATTCTAATCAATCAGTCCAAGAGGGGTATGGTTACAGTTCAAATTTTGACGATGGAATGGATTTCTGGTATGATCTATTCGTATCAGGGGAGTTTATAGAGTTACCTTCATTCTGA 831 0.4416 MVRAPCCEKMGLKKGSWTPEEDQILISYIQEHGHGNWRALPKQAGLLRCGKSCRLRWINYLRPDIKRGNFTVEEEETIIKLHEMLGNRWSAIAAKLPGRTDNEIKNVWHTHLKKRLLKTSQPINSDKKTRGSKTKPSIKRSDSNSSTVTSQSEPTSFISFPEKDSASVSACTTSSSDFSSSLLTVGESKNMEIMEIKSEDMDSLETILPEIYESFWSETAMEDNGHTTTNNELHQYPFDSNQSVQEGYGYSSNFDDGMDFWYDLFVSGEFIELPSF 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa08g0747 276 CDD SANT 69 112 IPR001005 -
Bisa08g0747 276 FunFam Transcription factor MYB15 68 144 - -
Bisa08g0747 276 CDD SANT 16 61 IPR001005 -
Bisa08g0747 276 MobiDBLite consensus disorder prediction 138 159 - -
Bisa08g0747 276 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Bisa08g0747 276 Pfam Myb-like DNA-binding domain 67 112 IPR001005 -
Bisa08g0747 276 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Bisa08g0747 276 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Bisa08g0747 276 FunFam MYB-related transcription factor 13 66 - -
Bisa08g0747 276 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Bisa08g0747 276 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Bisa08g0747 276 MobiDBLite consensus disorder prediction 119 159 - -
Bisa08g0747 276 SUPERFAMILY Homeodomain-like 10 108 IPR009057 -
Bisa08g0747 276 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 229 - -
Bisa08g0747 276 Gene3D - 13 66 - -
Bisa08g0747 276 Gene3D - 69 151 - -
Bisa08g0747 276 SMART sant 66 114 IPR001005 -
Bisa08g0747 276 SMART sant 13 63 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa08g0747 Bisa-ChrBisa08 12765422 12767065 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa08g0747 1 276 MYB Transcription Factor Family AT2G31180 51.429 6.44e-86 255
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Bisa08g0747 Myb_DNA-binding 6.1e-16 CL0123