Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa08g0667 ATGGCAGCTTCTGCAGCTGCGGCCATAGGCTCCTCTTTTTCTTCCTCCTTCAACACTCTCAAGTGTCTCCGTTCTTCCACCAACTTCTCCTTGGAACCCCTCCTCAGAGTGTCGTCCACTCGCTCAGTGGCCCCTGTGTCACAATCACAATCACCTTTGGTGGATACTCTTTCCGTTGGTACCAATCTGCACAAATTGTGGGTGCCGAGGGTCTCTGCGCAGGAAGAGATTGCGGTGGCTGATGAGGTTGAAGAGAAGCAGGAGGAAGGAGAAGATGTTGGAGAAGGAGAGCAAGTGGTAGAAGAGGGAGGAGAGGCTGAAGAATCTGTCAATACTAAGCTTTATTTTGGGAATTTACCTTACAGTGTTGACAGTGCACAGCTTGCAGGGATAATTCAGGAATATGGCAGCCCAGAACTGATAGAGGTTCTTTACCACAGGGAAACTGGAAAAAGCAGAGGGTTTGCATTTGTGACAATGAGTAGTATTGAAGATTGTAATGCAGTAATAAATAATCTTGATGGAACTGAATTCTTGGGTCGAACCCTGCGGGTGAACTTCTCTGACAAACCTAAACCAAAAGAACCCTTATACCCCGAGACTGAACATAAGCTGTTTGTTGGGAACTTGTCATGGTCAGTAACTTCTGAGAGTCTGACACAAACTTTTAAAGAGTATGGAGAAGTGGTAGGAGCTAGGGTCTTGTATGATGGCGAAACTGGAAGGTCTCGTGGATACGGTTTTGTTTGCTATTCATCCAAATCAGAAATGGAAGCTGCCCTTGCATCTTTGAATGGAGTGGAACTGGAAGGACGGGCGATGCGTGTAAGCTTGGCTGAGGGCAAGAGATCATAA 855 0.4667 MAASAAAAIGSSFSSSFNTLKCLRSSTNFSLEPLLRVSSTRSVAPVSQSQSPLVDTLSVGTNLHKLWVPRVSAQEEIAVADEVEEKQEEGEDVGEGEQVVEEGGEAEESVNTKLYFGNLPYSVDSAQLAGIIQEYGSPELIEVLYHRETGKSRGFAFVTMSSIEDCNAVINNLDGTEFLGRTLRVNFSDKPKPKEPLYPETEHKLFVGNLSWSVTSESLTQTFKEYGEVVGARVLYDGETGRSRGYGFVCYSSKSEMEAALASLNGVELEGRAMRVSLAEGKRS 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa08g0667 284 SMART rrm1_1 113 186 IPR000504 GO:0003723
Bisa08g0667 284 SMART rrm1_1 204 277 IPR000504 GO:0003723
Bisa08g0667 284 PANTHER OS02G0815200 PROTEIN 43 282 - -
Bisa08g0667 284 Gene3D - 70 192 IPR012677 -
Bisa08g0667 284 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 114 184 IPR000504 GO:0003723
Bisa08g0667 284 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 205 274 IPR000504 GO:0003723
Bisa08g0667 284 CDD RRM2_NsCP33_like 204 279 - -
Bisa08g0667 284 MobiDBLite consensus disorder prediction 84 104 - -
Bisa08g0667 284 FunFam 31 kDa ribonucleoprotein, chloroplastic 73 193 - -
Bisa08g0667 284 FunFam 28 kDa ribonucleoprotein, chloroplastic 194 284 - -
Bisa08g0667 284 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 112 190 IPR000504 GO:0003723
Bisa08g0667 284 SUPERFAMILY RNA-binding domain, RBD 107 195 IPR035979 GO:0003676
Bisa08g0667 284 Gene3D - 193 284 IPR012677 -
Bisa08g0667 284 SUPERFAMILY RNA-binding domain, RBD 196 283 IPR035979 GO:0003676
Bisa08g0667 284 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 203 281 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa08g0667 Bisa-ChrBisa08 11332362 11335521 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa08g0667 101 282 Eukaryotic Initiation Factors Gene Family AT4G34110 28.426 6.30e-15 72.8