Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa08g0662 ATGACTCTGGGTTCGCTTGGTGGTGCTGATGAAGCCACGGTGTCAAATGCCAAGGCTCTGGCTCAAGACAGTGAGGCTGAACTTGAATTGGGTTTGGGTCTGAGCCTTGGTGGTGGTGCTGGGAAGGCTAAGATTTCTGCATGGGGTGAGTGTGGTCGTATTCTCACGGCCAAAGACTTCCTTTCTGGTGTCCCTCATGGCCCTTCTGTATCTGTTGCTGCTTCTCGTTTCTCAGATAGAGTCAGTACTGTGGTTGGTCCAGTTTCTGGGACTAAGAGAGCTGCTGACTCTGTCTCTCATGAAGCTGGATCTCCTACTGCTGCCAGTCAAGTTGTTGGATGGCCACCCATCAGGGCATATAGGATGAACAGCTTGATAAACCAAGCTAAGTCCCAGAGAGCTGAAGAAGACAAATCAAATGGAGAGACAAATAATCTCAATGATGCTTCAGTGACAGAAAAAAACCATCTTGGATTTGTGAAGGTGAATATGGATGGAATCCGAATTGGGAGAAAGGTAGACTTGAATTCTCATTCAAGCTATGAGACTTTAGCTCAGACACTGGAAGACATGTTCTTCAGGCCTCCTTCAGCCACTAATCCAACTGCAGGTGGCGAGAAAGAACTGGCAACGAAACCCTCTAAGCTTTTGGATGAAGCATCAGAATTTGTGCTCACATATGAAGATAAGGAGGGTGATTGGATGCTTGTGGGAGATGTTCCATGGAGGATGTTTCTCGGCTCAGCGAGAAGGCTCCGAATCATGAGAACATCCGAAGCCAACGGGCTCGCTCCAAGATATCAAGACAAAAATGAGAAACTAAGAAGCAGACCCATATAG 840 0.4726 MTLGSLGGADEATVSNAKALAQDSEAELELGLGLSLGGGAGKAKISAWGECGRILTAKDFLSGVPHGPSVSVAASRFSDRVSTVVGPVSGTKRAADSVSHEAGSPTAASQVVGWPPIRAYRMNSLINQAKSQRAEEDKSNGETNNLNDASVTEKNHLGFVKVNMDGIRIGRKVDLNSHSSYETLAQTLEDMFFRPPSATNPTAGGEKELATKPSKLLDEASEFVLTYEDKEGDWMLVGDVPWRMFLGSARRLRIMRTSEANGLAPRYQDKNEKLRSRPI 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa08g0662 279 Gene3D - 152 269 - -
Bisa08g0662 279 Pfam AUX/IAA family 75 266 IPR033389 -
Bisa08g0662 279 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 27 262 IPR003311 GO:0005634|GO:0006355
Bisa08g0662 279 ProSiteProfiles PB1 domain profile. 157 259 IPR000270 GO:0005515
Bisa08g0662 279 MobiDBLite consensus disorder prediction 128 149 - -
Bisa08g0662 279 SUPERFAMILY CAD & PB1 domains 159 255 - -
Bisa08g0662 279 FunFam Auxin-responsive protein 152 267 - -
Bisa08g0662 279 MobiDBLite consensus disorder prediction 193 212 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa08g0662 Bisa-ChrBisa08 11281166 11284349 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa08g0662 160 266 B3 DNA Binding Superfamily AT1G59750 33.645 3.07e-12 64.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Bisa08g0662 AUX_IAA 3.2e-63 CL0072