Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa08g0648 ATGGATTCTTTCGCGCCATTTCAAGACCTCAATCACTTCCCTGACCTACCCACCGCTGTACCCAGCAGCAGCTTCGACCCCGTCAATGCCGTTCCCTCTACCCCCACCATTATGTTGGTCCCTAAATTGGAGCCCAAGCTCGAGCCGTTGGACGAGCCATTTCTGAGCCATCCTCCCCAAGAACCCCAAGAAGTCGAGCAGGCCTTGTTCACGAATCATGCCCCTAACGGGTTCTCTGATTCTCAACAGCCTAATTCCTGCGACCAGAGCATTGCCTTCGTTGAATCCCCCCCGGGATTGCCGACGGAGCAGGACAATGTGTACGCGGAGTTCTATCGGATTTCTGAGCAGTTTAGGACTGCGTTTGCTAAAAGGTTAAAGCGATTCGGAGATGTTGACGTTTTGGACCCAGATTCCCGGGCAATTGTTCCTGTGCCGCAGGAAAATCAGGTTCCTGCGGTCGTCGTTACTCCCAAGCGGACCCCGCGTCGGAAGGAGCTCGTGAGGGTCACTGATCTTCGAATTGAAGACGACAGGTATTTCCGCGACATAATAAGAAGGACCAGGATGATCTATGATTCGTTGCGCGTTTTTGCAACTTTGGAGGAGGAGAGGCGATGCGATTCGCCTAACGGTAAACGGCTGCGAGGCGATTTGAGGGCTGCCTCGTTGATGAGGGATCGGGGGATGTGGCTTAACCGTGATAAGCGTATAGTGGGTGCGATTCCAGGGATTTACATTGGCGATTTGTTCTTTTTTAGGATGGAACTGGTCGTGGTTGGGTTGCACGGTCAACCACAAGCTGGAATTGACTATCTTCCTGCTAGCCAGAGCACAAATGGGGAGCCGATAGCAACCAGTGTGATAGTTTCTGGTGGATATGAGGATGATGAAGATGGTGGCGATGTGATAATATACACGGGTCATGGAGGGCAAGATAAGAAGAATTCAAGGCAAGTTGTTCACCAGAAGTTAGAAGGAGGAAATCGTGCAATGGAAAGAAGTATGCATTATGGGATTGAAGTGAGGGTTATCCGAGGGTTCAGATATCAGGGAAGTGTCTCTAGTAAGATTTACGTTTATGATGGCTTGTATAGAATTGTTCAATGCTGGTTTGATGTGGGTAAATCTGGATTCGGAGTTTACAAGTATAAGCTTGTCAGAATTGACGGCCAACCGGAAATGGGTAGCGCTATTCTTAGACTTGCTCAGACTCTGAGGACCAGTCCATTGTCTATCAAGCCCATGGGTTATCTTAGTCTTGATATTTCTAACCAAAAGGAGAATGTTCCTGTTCGTCTTTTTAATGACATTGATAGGGATCATGACCCTCTTCGTTATGAATATCTTCCACGGACTAATTTTCCACAATTTGTGTTTCATCAAAGTGGAAATTCTACTGGTTGTCAGTGTGTTGGCGTCTGTGGTGATAACTGCTTCTGTGCTTTGAAAAATGGAGGCGAATTTCCTTATAATCTAAATGGACTTCTCGTGAGAGGGAAGCCTATAATTTTTGAATGTGGCCCTTTTTGCCGTTGTCCTCCAACTTGCCGAAATCGTGTTACACAAAATGGGCTGAAGAATAGATTGGAAGTGTTCAGGTCTAGGGAAACAGGTTGGGGAGTTAGGTCACTGGACCTCATTCATGCTGGTGCTTTCATCTGTGAATATACAGGGGTTGTTCTGACGATGGAGCAAGCACGGATTTTGACAATGAACGGTGATTCATTGATATATCCAAGTCATTTTTCTGATCGGCAAGCAGCAGAATGGGGGGATTTATCTAAGATATATTCTGATTATGTGCATCCATCATATCCATCTATTCCTCCTTTGGACTTTGCTATGGATGTGTCAACCATGAGGAATGTTGCTTGCTATATGAGCCACAGTTCAATTCCTAATGTGTTGGTTCAATTTGTCCTGTATGACCACAATAATTTGATGTTCCCTCACCTTATGCTATTTGCAATGGAGAACATCCCTCCAATGAGGGAGCTCAGCCTTGACTATGGGGTGGCTGATGAAAGGAGTGGCAAGCTTGCTCTATGTAACTGA 2058 0.4645 MDSFAPFQDLNHFPDLPTAVPSSSFDPVNAVPSTPTIMLVPKLEPKLEPLDEPFLSHPPQEPQEVEQALFTNHAPNGFSDSQQPNSCDQSIAFVESPPGLPTEQDNVYAEFYRISEQFRTAFAKRLKRFGDVDVLDPDSRAIVPVPQENQVPAVVVTPKRTPRRKELVRVTDLRIEDDRYFRDIIRRTRMIYDSLRVFATLEEERRCDSPNGKRLRGDLRAASLMRDRGMWLNRDKRIVGAIPGIYIGDLFFFRMELVVVGLHGQPQAGIDYLPASQSTNGEPIATSVIVSGGYEDDEDGGDVIIYTGHGGQDKKNSRQVVHQKLEGGNRAMERSMHYGIEVRVIRGFRYQGSVSSKIYVYDGLYRIVQCWFDVGKSGFGVYKYKLVRIDGQPEMGSAILRLAQTLRTSPLSIKPMGYLSLDISNQKENVPVRLFNDIDRDHDPLRYEYLPRTNFPQFVFHQSGNSTGCQCVGVCGDNCFCALKNGGEFPYNLNGLLVRGKPIIFECGPFCRCPPTCRNRVTQNGLKNRLEVFRSRETGWGVRSLDLIHAGAFICEYTGVVLTMEQARILTMNGDSLIYPSHFSDRQAAEWGDLSKIYSDYVHPSYPSIPPLDFAMDVSTMRNVACYMSHSSIPNVLVQFVLYDHNNLMFPHLMLFAMENIPPMRELSLDYGVADERSGKLALCN 685
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa08g0648 685 ProSiteProfiles Pre-SET domain profile. 467 525 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Bisa08g0648 685 ProSiteProfiles PUA domain profile. 331 349 - -
Bisa08g0648 685 MobiDBLite consensus disorder prediction 73 99 - -
Bisa08g0648 685 FunFam Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH5 222 404 - -
Bisa08g0648 685 Gene3D - 237 396 IPR036987 -
Bisa08g0648 685 ProSiteProfiles YDG domain profile. 240 388 IPR003105 -
Bisa08g0648 685 MobiDBLite consensus disorder prediction 73 92 - -
Bisa08g0648 685 SUPERFAMILY SET domain 410 673 IPR046341 -
Bisa08g0648 685 SUPERFAMILY PUA domain-like 221 400 IPR015947 -
Bisa08g0648 685 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 158 679 - -
Bisa08g0648 685 Gene3D SET domain 397 685 IPR046341 -
Bisa08g0648 685 Pfam SAD/SRA domain 239 392 IPR003105 -
Bisa08g0648 685 SMART preset_2 420 512 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Bisa08g0648 685 ProSiteProfiles SET domain profile. 528 672 IPR001214 GO:0005515
Bisa08g0648 685 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 74 685 IPR025794 GO:0016571
Bisa08g0648 685 SMART set_7 528 678 IPR001214 GO:0005515
Bisa08g0648 685 Pfam SET domain 539 672 IPR001214 GO:0005515
Bisa08g0648 685 SMART G9a_1 235 392 IPR003105 -
Bisa08g0648 685 Pfam Pre-SET motif 423 520 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa08g0648 Bisa-ChrBisa08 10932619 10934676 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa08g0648 159 674 Su(var)3-9 homologs AT5G04940 38.961 7.14e-112 350
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Bisa08g0648 SAD_SRA 1.5e-48 CL0178