Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Bisa08g0628 | ATGAGTCTGGATAATTTGATCAAGGTTGTAGCCCATATTATGAAGTTTACTAAGGCTAGTATTAACTGCAAACAAGGCTCTATTATGATGATAGAGGCATTGGTGATTGTTTTGGATGTACAGGCTACTAAAATCGGTTACATAGTTGGATCTCAAGTTTGGGCTGAGGACCCTGAGATAGCTTGGATAGATGGGGAAGTTGTGGAAGTTAAAGACGAAGAGCTCAAGGTTAAGACTACATCAGACAAGACAGTTGTGGTCAAAGCATCTAATGTCCATCCGAAGGATCCTGAGTTCCCTCCTGCTGGTGTGGATGATATGACAAGGCTGGCATATCTGCATGAACCAGGAGTTCTCCAGAATTTGCATTGTCGATATGATATGAATGAAATATATACATACACAGGAAATATATTGATTGCTGTGAACCCTTTTAAAAGATTACCTGAATTGTATGGCCATGATGTGATGGAAAAGTATAAAGGGTCGGCTTTTGGTGAACTGAGCCCACATCCTTTTGCAATTGCTGATTCTGCATATAGGATGATGATAAATGAAGGAGCAAGCCAAGCAATTTTGGTCAGTGGAGAAAGTGGAGCTGGCAAAACAGAGAGCACAAAGATGCTTATGCATTATCTTGCCTATATGGGTGGGAGAGCAGCATCTGAGGGACAGTCTGTGGAGCAACAAGTTCTGGAGTCCAATCCTGTTTTAGAAGCATTTGGCAATGCGAAGACAGTTAGGAACAATAATTCAAGTCGATTTGGTAAGTTTGTGGAGCTTCAGTTTGATCAGAAGGGGAGAATTTCGGGAGCTGCTATAAGAACTTATTTGCTGGAACGATCTCGCGTCTGTCAAGTTTCGGATCCTGAGAGAAACTATCATTGCTTTTATATGCTTTGTGCTGCACCACAAGAGGATATTAAAAGGTACAAATTGGAAAATCCAAGAACATATCATTACCTAAATCAATCAAATTTCTTTGAGCTGGATGGACTGGATGAATCTAAGGAGTACCTTGCAACTAGGAGGGCTATGGAGGTTGTTGGTATGAGTTCTGATGAGCAGGCTGCTATATTCCGAATAGTAGCTGCAGTACTACATTTAGGAAACATTGAATTTAAAAAGGGGGATGAGCCAGATTCTTCAGAACCCAAAGATGATCAATCTCGTTTCCACTTAAAAACTGTAGCTGAACTTTTGATGTGTGACGACAAGTCACTTGAGGACTCTTTGTGCAAACGTGTTATGGTGACGCGTGGTGAGGCCATAACAAAATGGCTTGATCCAAATTCAGCAGTTCTCAGTAGAGATGCATTGGCGAAAGTAGTTTACTCAAAGCTGTTTGACTGGATTGTCAAAAAGATTAATGACTCTATTGGTCAAGATCCAAATTCAAAGAACTTAATTGGGGTTCTGGATATATATGGATTTGAGAGTTTCAAGACAAACAGTTTTGAGCAATTTTGTATCAACTTGACAAATGAGAAATTACAGCAACATTTCAACCAGCATGTCTTCAAACTGGAGCAAGAGGAATATACAAAGGAAGAAATTAAGTGGAGTTATATAGAGTTCATTGATAATCAGGATGTTCTTGATCTCATTGAGAAGAAACCTGGTGGCATCATTGCTCTTCTGGATGAGGCTTGTATGTTTCCAAGAGCAACACATGAAACATTCGCTGAAAAGCTATATCAAACTTTATTGTCTAATAAACGCTTCAGCAAACCTAAGTTGTCCCGTACTGGCTTCACCATTTGCCATTATGCTGGTGATGTTACTTATCAGACTGATTTTTTCCTTGACAAGAACAAAGATTATGTTGTTCCGGAGTTTGAGTCACTACTCTCTGCTTCAAAGTGCTCCTTTGTTTCAGGGTTGTTTCCTCCTCAACCTGAGGAAACTTCCAAATCAGCAAAGTTCTCTTCAATAGCCACCCAGTTTAAGCTACAACTACAATCTTTGCTTGAAACGCTAAGTGCTACTGAGCCACATTACATTCGTTGTGTAAAGCCAAATAATCTTCTTAAGCCAGGGATATTTGAGAACACTAACGTATTGCAGCAGCTTCAATGTGGGGGAGTAATGGAGGCAATTCGGATAAGTTGTGCTGGATATCCCACTAGAAAGAACTTTGATGAATTTGCTAAGCGGTTTAGTGTGCTGGCACCTGATGTTATGAAAGGATGCCCTGACGAGAGGAGTGCTTGCATAAGGCTGCTAGGTAGAGCAAACCTTGAAGGCTATCAGGTTGGCAAGACTAAAGTATTTCTGAGAGCAGGACAGATGGCAAAACTAGATTCATCTCGCGCTGAGGTCTTAGGAAGATCTGCAACCATCATTCAGAGTAAAGTTCGCTCATATTTTGGTAGAAAACATTACACTTTGTTGTGGATGTCTGCCATACAAATACAGACCATTTGTAGAGGAGAACTTGCACGATATCTGTGTGAGAAATTGAGGAGGGAAGCTGCTTCTGTGAAAATCCAAAAGAATGCTCGAAAGTATATTGCTAGAACAGCTTATATAAGTCTGTGTGACTCAGCTGTTTCTATTCAAACTGGTATGCGATGCATGGCTGCAAGAAATAAGCTCAAATTCAGGAGGCAGACGGAAGCTACAATTGTTATCCAGAGTCACTGCAGAGGTTATGTGGCCCACGTCCATCATGTAAGGCTAAAGGAAGCAGCATTGGTTATACAGTGTGTCTCAAGGAGACAAATAGCCCATAGAGAACTTCAAAAGCTCAAAATGGCCGCTAAGGAAACTGGTGCTCTCCAAGCTGCCAAAGAAAAACTTGAAGAGGAAGTTCAAGAATTAAATTATTGTCTAGAAAAGGAGAAGAGGATGAGGGCTGATATTGAGGAGGAAAATGCAAAATTGCAATCTGCCTTGGAAGAAACTATGGCTCTGCTCATTCAAGAGCGTGAGTTGGCAAAGAAAGTGGATGAACAGGAAAATGCAGATTTGCAATCTGCCTTGGAAGAAACTAGGGCACTGCTTCGTCAGGAAGAGGCGGCAAAAAAGGTGTGGGAGCAGGAAAATGCAAAATTGCAATCTGCCTTGGAAGAAACTAAGGCACTGCTCATTCAGGAGCGTGAGGCAGCAAAGAAAGTGAGTGGGCAGGAAAATGCAAAATTGCAGTATGCCTCAGAAGATACTAAGTCTCTGCCCATTCAGGAGCATGAAGCAACAAAAGATGTGGGTGAGCTAAATCCTAATATACCAGAGTCTCCTGTTGTTGATAATGATTTGATCGAGAAGCTAATGGCAGAAAATGACCATCTCAAGGCACTGGTTAAGTCATTGGAAAAGAAAACTGAGAACACGGGGGAGAAATCTGTAGAAAGGGACAAGCTTATTGAAGAGCAAGACAATACGGAACTGCCCATTCAGGAACATGAGGCAGCAGAAAAAGTATCTGAGTTGTCTTCTGTTGTACATGAGTCTCCAGTTGGTGATAATGATACGAACAATACACTTGCTGTGGAAAATGAACGTCTCAAGGCACTGGTTAATTCATTGGAAAAGAAAATTGATGAAAGTAACAAGCTCAGTGAAGAGCGCTTGAAGCAAGCTTCAGAGGCAGAAACAAAGATAATTGACCTGAAGATGGCTATGCAGAGGCTTGAAGAAAAACTTTCTGATATAGAAACGGAGGATCAAATTCTGAGGCAGCAGACTCTAATGAAATCATCTTCAACTAGACAGTCTGGAGCTCAGCCTTCAGAAAATGATCATGACGATCCACAGAATTCTCCAAGTAAAAAACTTGATACAGAGGCTGATATTGAGTTGAAGAGATCTCAAACTGAAAAGCTACAAGAGAGTGTAGATGCTCTTTTGAAATGTGTGGCAGAAGCAGACCTTGGGTTCAGTGAAGGAAAACCAGTTGCAGCTTACACCATTTATAAGTGTCTACTACACTGGAAATCTTTTGAAGCAGAAAAGACAAGTGTATTTGATCGTCTTATTCAGATGGTTGGTTCTGCTATAGAGGATCAGGACAATAATGATCTTATGGCTTATTGGTTATCCAATACATCCGCATTGTTATTTATTCTTCAGCAAAGTTTCAGACCACCTTCAGCTCAGAAACCTCCTGCCCCTGCAACCTCTTTTTTTGGGAGGATGGCCCAAAGTTTTCGTTCATCTACTGCTGGTACTGCACTTGATACAATTCGCCAGGTTGATGCCAAGTATCCAGCTTTGCTTTTCAGGCAGCAGCTTACAGCATATGTGGAAAAGATTTATGCAATTGTTAGAGATAATTTGAAGAAGGATTTGTCGCCTCTGCTTTCTTCTTGCATTTGTGCACCTAAAGCATCAGAGGGAAGTGTGCCAGATGAACAGTCAAAAGATAATAGCCCACCTGGTTCTTGGCAGAGCGTTATTGATTGCCTTGACAAATTTCTCAATATGGTGAAAGAAAATCATGTGCCTCCTGTTCTAGTTCAGAAGATATTAACTCAGGTTCTCCATTACATCAATGTGCAACTCTTTAATAGCCTTCTTTCAAATCAAGAATGCTGCACATTTAGCAATGGAGAATTTGTAAACTCTAGGTTGGCTGAACTAGAAAATTGGTGTGGTGAAGCAACAGAGGAGTATGCTGCTTCATCCTGGGATGAACTCAAACATCTGAGGCAAGCAGTTGGACTCTTGGTTAAAGATGAGAAGCCCACAATATCCTACGATGTTCTTACCACTGACCTCTGCCCTATCCTGAGTGCTCCTCAGCAGTATAAAATTTGTACACTTTATGGAGAGAACAGTGACAGTACACAATGTGTATCAGAAGACGTTATTACAAGGTTGAAGCTTCTAATGACAGATGATGCAACTGAGGATAGCTCCTCCTTCTTGTTGGACGATAATTCAAGTATTCCAATCTTTGTTGATGAGATTTCTAATGCCCTTCAAGGAAATAACTCTTTAAAAGTACAAGCGCCAGCGGAACTTGTTAAGAATGCAGCCTTCCAGTTTTTACAGGACTAA | 5001 | 0.4095 | MSLDNLIKVVAHIMKFTKASINCKQGSIMMIEALVIVLDVQATKIGYIVGSQVWAEDPEIAWIDGEVVEVKDEELKVKTTSDKTVVVKASNVHPKDPEFPPAGVDDMTRLAYLHEPGVLQNLHCRYDMNEIYTYTGNILIAVNPFKRLPELYGHDVMEKYKGSAFGELSPHPFAIADSAYRMMINEGASQAILVSGESGAGKTESTKMLMHYLAYMGGRAASEGQSVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVELQFDQKGRISGAAIRTYLLERSRVCQVSDPERNYHCFYMLCAAPQEDIKRYKLENPRTYHYLNQSNFFELDGLDESKEYLATRRAMEVVGMSSDEQAAIFRIVAAVLHLGNIEFKKGDEPDSSEPKDDQSRFHLKTVAELLMCDDKSLEDSLCKRVMVTRGEAITKWLDPNSAVLSRDALAKVVYSKLFDWIVKKINDSIGQDPNSKNLIGVLDIYGFESFKTNSFEQFCINLTNEKLQQHFNQHVFKLEQEEYTKEEIKWSYIEFIDNQDVLDLIEKKPGGIIALLDEACMFPRATHETFAEKLYQTLLSNKRFSKPKLSRTGFTICHYAGDVTYQTDFFLDKNKDYVVPEFESLLSASKCSFVSGLFPPQPEETSKSAKFSSIATQFKLQLQSLLETLSATEPHYIRCVKPNNLLKPGIFENTNVLQQLQCGGVMEAIRISCAGYPTRKNFDEFAKRFSVLAPDVMKGCPDERSACIRLLGRANLEGYQVGKTKVFLRAGQMAKLDSSRAEVLGRSATIIQSKVRSYFGRKHYTLLWMSAIQIQTICRGELARYLCEKLRREAASVKIQKNARKYIARTAYISLCDSAVSIQTGMRCMAARNKLKFRRQTEATIVIQSHCRGYVAHVHHVRLKEAALVIQCVSRRQIAHRELQKLKMAAKETGALQAAKEKLEEEVQELNYCLEKEKRMRADIEEENAKLQSALEETMALLIQERELAKKVDEQENADLQSALEETRALLRQEEAAKKVWEQENAKLQSALEETKALLIQEREAAKKVSGQENAKLQYASEDTKSLPIQEHEATKDVGELNPNIPESPVVDNDLIEKLMAENDHLKALVKSLEKKTENTGEKSVERDKLIEEQDNTELPIQEHEAAEKVSELSSVVHESPVGDNDTNNTLAVENERLKALVNSLEKKIDESNKLSEERLKQASEAETKIIDLKMAMQRLEEKLSDIETEDQILRQQTLMKSSSTRQSGAQPSENDHDDPQNSPSKKLDTEADIELKRSQTEKLQESVDALLKCVAEADLGFSEGKPVAAYTIYKCLLHWKSFEAEKTSVFDRLIQMVGSAIEDQDNNDLMAYWLSNTSALLFILQQSFRPPSAQKPPAPATSFFGRMAQSFRSSTAGTALDTIRQVDAKYPALLFRQQLTAYVEKIYAIVRDNLKKDLSPLLSSCICAPKASEGSVPDEQSKDNSPPGSWQSVIDCLDKFLNMVKENHVPPVLVQKILTQVLHYINVQLFNSLLSNQECCTFSNGEFVNSRLAELENWCGEATEEYAASSWDELKHLRQAVGLLVKDEKPTISYDVLTTDLCPILSAPQQYKICTLYGENSDSTQCVSEDVITRLKLLMTDDATEDSSSFLLDDNSSIPIFVDEISNALQGNNSLKVQAPAELVKNAAFQFLQD | 1666 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Bisa08g0628 | 1666 | SMART | MYSc_2a | 96 | 773 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
| Bisa08g0628 | 1666 | Pfam | Myosin head (motor domain) | 104 | 760 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
| Bisa08g0628 | 1666 | ProSiteProfiles | IQ motif profile. | 848 | 875 | IPR000048 | GO:0005515 | |
| Bisa08g0628 | 1666 | Gene3D | - | 479 | 663 | - | - | |
| Bisa08g0628 | 1666 | CDD | MyosinXI_CBD | 1273 | 1635 | IPR037975 | GO:0007015 | |
| Bisa08g0628 | 1666 | ProSiteProfiles | Myosin N-terminal SH3-like domain profile. | 48 | 97 | IPR004009 | GO:0003774|GO:0005524|GO:0016459 | |
| Bisa08g0628 | 1666 | FunFam | Myosin heavy chain | 292 | 347 | - | - | |
| Bisa08g0628 | 1666 | MobiDBLite | consensus disorder prediction | 1443 | 1462 | - | - | |
| Bisa08g0628 | 1666 | Pfam | DIL domain | 1489 | 1590 | IPR002710 | - | |
| Bisa08g0628 | 1666 | MobiDBLite | consensus disorder prediction | 1230 | 1261 | - | - | |
| Bisa08g0628 | 1666 | ProSiteProfiles | Dilute domain profile. | 1323 | 1613 | IPR002710 | - | |
| Bisa08g0628 | 1666 | Gene3D | - | 292 | 350 | - | - | |
| Bisa08g0628 | 1666 | SMART | DIL_2 | 1488 | 1595 | IPR002710 | - | |
| Bisa08g0628 | 1666 | PRINTS | Myosin heavy chain signature | 132 | 151 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
| Bisa08g0628 | 1666 | PRINTS | Myosin heavy chain signature | 522 | 550 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
| Bisa08g0628 | 1666 | PRINTS | Myosin heavy chain signature | 236 | 263 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
| Bisa08g0628 | 1666 | PRINTS | Myosin heavy chain signature | 189 | 214 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
| Bisa08g0628 | 1666 | PRINTS | Myosin heavy chain signature | 469 | 497 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
| Bisa08g0628 | 1666 | FunFam | Myosin 2 | 352 | 468 | - | - | |
| Bisa08g0628 | 1666 | ProSiteProfiles | IQ motif profile. | 801 | 827 | IPR000048 | GO:0005515 | |
| Bisa08g0628 | 1666 | FunFam | Class V myosin | 479 | 624 | - | - | |
| Bisa08g0628 | 1666 | Coils | Coil | 1159 | 1189 | - | - | |
| Bisa08g0628 | 1666 | Gene3D | Myosin VI head, motor domain, U50 subdomain | 352 | 641 | - | - | |
| Bisa08g0628 | 1666 | Coils | Coil | 1194 | 1228 | - | - | |
| Bisa08g0628 | 1666 | Coils | Coil | 1087 | 1107 | - | - | |
| Bisa08g0628 | 1666 | FunFam | unconventional myosin-Va | 873 | 921 | - | - | |
| Bisa08g0628 | 1666 | Pfam | IQ calmodulin-binding motif | 777 | 795 | IPR000048 | GO:0005515 | |
| Bisa08g0628 | 1666 | Pfam | IQ calmodulin-binding motif | 872 | 890 | IPR000048 | GO:0005515 | |
| Bisa08g0628 | 1666 | Pfam | IQ calmodulin-binding motif | 825 | 843 | IPR000048 | GO:0005515 | |
| Bisa08g0628 | 1666 | Gene3D | Kinesin motor domain | 105 | 702 | IPR036961 | - | |
| Bisa08g0628 | 1666 | Pfam | Myosin N-terminal SH3-like domain | 50 | 92 | IPR004009 | GO:0003774|GO:0005524|GO:0016459 | |
| Bisa08g0628 | 1666 | ProSiteProfiles | IQ motif profile. | 871 | 897 | IPR000048 | GO:0005515 | |
| Bisa08g0628 | 1666 | Gene3D | - | 825 | 872 | - | - | |
| Bisa08g0628 | 1666 | Gene3D | - | 873 | 922 | - | - | |
| Bisa08g0628 | 1666 | Gene3D | - | 775 | 824 | - | - | |
| Bisa08g0628 | 1666 | MobiDBLite | consensus disorder prediction | 1230 | 1249 | - | - | |
| Bisa08g0628 | 1666 | ProSiteProfiles | Myosin motor domain profile. | 102 | 772 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
| Bisa08g0628 | 1666 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 824 | 923 | IPR027417 | - | |
| Bisa08g0628 | 1666 | Coils | Coil | 917 | 972 | - | - | |
| Bisa08g0628 | 1666 | Coils | Coil | 981 | 1036 | - | - | |
| Bisa08g0628 | 1666 | SMART | iq_5 | 893 | 915 | IPR000048 | GO:0005515 | |
| Bisa08g0628 | 1666 | SMART | iq_5 | 774 | 796 | IPR000048 | GO:0005515 | |
| Bisa08g0628 | 1666 | SMART | iq_5 | 822 | 844 | IPR000048 | GO:0005515 | |
| Bisa08g0628 | 1666 | SMART | iq_5 | 797 | 819 | IPR000048 | GO:0005515 | |
| Bisa08g0628 | 1666 | SMART | iq_5 | 845 | 867 | IPR000048 | GO:0005515 | |
| Bisa08g0628 | 1666 | SMART | iq_5 | 870 | 892 | IPR000048 | GO:0005515 | |
| Bisa08g0628 | 1666 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 75 | 825 | IPR027417 | - | |
| Bisa08g0628 | 1666 | ProSiteProfiles | IQ motif profile. | 823 | 852 | IPR000048 | GO:0005515 | |
| Bisa08g0628 | 1666 | PANTHER | MYOSIN | 1200 | 1586 | - | - | |
| Bisa08g0628 | 1666 | CDD | MYSc_Myo11 | 116 | 760 | IPR036018 | - | |
| Bisa08g0628 | 1666 | Gene3D | - | 706 | 773 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Bisa08g0628 | Bisa-ChrBisa08 | 10542812 | 10610017 | Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Bisa08g0628 | 49 | 1666 | Myosins gene family | AT1G04600 | 58.648 | 0.0 | 1949 |