Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa08g0608 ATGCCTGAAGTTTACCAAATTTCTAATTCAATCATAGAAAAAGTCACATGGGTGAATGAGTTTTGTGGCAATTATAAAGCATTTGAGCTATGCCATGGATTTGCATACTTGGTTTCGCAATCTGAGTTAACTATTGCTTGTGCAGGTCTCTTGAAAATTAACATGTCAGGGAATTTCAATAAAAGGAGGGGGTTGGCAGACAGGTGTTACTGTTCTGGTATTTTACTATTATTGGCTTTACTTCTTCATACTACAGAGGCGTTGAACATAGAGGGGCAGTACCTCCTTCAGCTGAAAAATAGTCTTCATGATGAATCTAATCGGTTGGCGAATTGGAAGTCTACTGATGATACACCATGTGGATGGACAGGTGTAAATTGCACTTCTGACAATAATCCCGTGGTTTGGTACCTTAATTTGAGTTCAATGAACCTTTCTGGAACTATAAATCCTAGCATTGGGGGTCTGGTCCATCTAACTTATCTCAATCTTGCTTATAATAAGCTGATGGGCAACATACCCAAGGATATTGGAAATTGCTCGAGATCAGGATATCTTTTTTTGAACAATAATCAATTAGAGGGAGAAGTTCCTGCTGAATTGGGTAAGCTTTCCCTTTTGAGAAAATTGAATATTTGCAACAACAAAATATCAGGTTCTTTTCCAGATGAATTGGGAAACTTGTCTTCATTAGTTGAGCTTGTAGCCTACACAAACAATCTCACAGGTCCCCTGCCTCGCAGTATTGGAAATCTCAGGAGTCTCACAACTTTGAGAGCTGGGGGAAATGGAATTTCTAGTAGCTTGCCAAGTGAGATTGGTGGATGTACGAGCTTGGAAGTTCTTGGTCTTGCCCAGAATCAGATAGGAGGGGAACTACCAAGGGAGATTGGGATGCTTCAGAACTTAAAAGAACTGATTCTATGGAATAACCAGTTATCAGGGACTATTCCTGAAGAGCTTGGGAATTGTACCAATCTTGATACCCTTGCTTTATATGGAAATGGTCTTGTTGGACCTTTACCTGAGGAGATTGGGAACCTCAAATCACTGAAGAAGTTGTATATTTACAGAAACAAGTTAAATGGAACCATTCCAAGGTCAATTGGGAATCTTTCTTTGGCAGTAGAAATTGATTTCTCAGAAAACTTTCTAGCGGGTGAAATTCCTTCTGAGATCAGCAAGATAAGTGGCCTTCACTTGCTCTTTCTCTTTGAGAATCAGCTGTCCGGTGTTATACCAAACGAGTTTAGTAGCTTGGGGAACCTGACAAGGCTGGACCTGTCCATTAATAATCTTACGGGTCCAATTCCATTGGGGTTCCAGTATTTGACTCGAATGTCTCAGTTGCAACTTTTTGACAACTCTCTAAGTGGAAATATTCCTCAAAGCCTTGGACTTAATAGTCCTCTTTGGGTGGTTGATTTTTCTGACAATAAATTGACAGGAAGAATACCTCCTCATCTATGTCGAAATTCTAATTTGATGTTGTTGAATCTGGCTTCTAATCAGCTGTATGGAAATATACCAGCTGGGATCTTGAACTGTGAAACATTGGCACAACTGCTATTGGTTCAAAATAGTCTTACTGGTGGGTTTCCTTCAGAGTTGTGCAAACTGGTGAACCTCACGGCAATTGAGTTGAACTATAACAAGTTCAGTGGTCCTATTTCTCCTGATATTGTGAGCTGCCAGAAGTTGCAGAGGCTTCATATTGCAAACAATTACTTTACATTAGAGTTGCCTAAGGAAATAGGAAACCTATCTCAGTTAGTGACCTTTAATGTTTCATCCAATTCTTTCATTGGACCAATCCCACGTGAAATTGTTAGATGCAAAAGGCTTCAGCGACTTGATCTCAGTCAGAACAGCTTTACTGGTTCCTTACCAGATGAGCTTGGAACACTCTCACAGTTGGAGCTTCTCAAGCTCTCGGATAATAAGCTGACCGGGAATATTCCTGCTGCATTAGGTAATCTGCTTCATTTGACAGCATTGCAGATGGGTGGCAATTTACTTTCCGGTGAAATACCTCCTGATCTGGGTAATCTCTCTAGCTTACAGATTGCATTGAATCTCAGTTACAATAACCTTACTGGGAGCATACCAGATAAGCTTGGCAGCCTGAATCTGCTTGAGTTTCTCATTCTCAATAACAACCACCTGAGTGGTGAAATTCCCAGCACATTTGAGAACCTTTCAAGCTTAATGGGGTGCAATTTCTCATACAACAGTCTCTCTGGACCTATACCTTCCATTCCAATATTTGAAAATATGGCAGTCAGCAGTTTTGTTGGTAACAATGGCCTCTGTGGTGCTCCTCTGCTTGACTGCAACACTAATCTATCTTCTCAATCCGATCCTCCTGGGAAAAGTATTGATAGCCGTCGCAGCAAAATTATCACAATAATAGCAACAGTTGTTGGTGGTGTTTCTCTCATTCTAATAGTAATCATTTTATATATTATGAGACGTCCTCCTGAGTCTGTTTCTTCTTTGCGGGATTCTGAGATGCCCTCCTCGGATTCAGATATCTACTTTCCTCCAAAAGATGGCTTCACCTTCCAAGATCTACTCGAAGCTACCAATAATTTTCATGAAAGTTATGTCATTGGAAGAGGGGCTTGCGGAACAGTTTATAAGGCAGTGATGCTATCTGGGAAGACCATTGCTGTGAAGAGGTTAGCATCCAACAGAGAAGGCAACAACATTGAGAATAGCTTCCGGGCTGAGATATTAACTCTTGGAAAGATAAGGCATCGAAATATAGTGAAACTATATGGGTTTTGCTATCACCATGGTTCCAATCTTCTACTATATGAGTACATGGCAAGGGGTAGCTTAGGGGAACTTCTTCATGGATTCTCCTGTACTTTGGAATGGCCAACTCGGTTCATGATTGCTCTCGGAGCTGCTGAGGGTCTTGCTTACTTGCATCATGATTGCAAACCAAAGATCATTCACCGTGATATAAAGTCAAATAACATTCTGCTTGATGAAAATTTTGAGGCCCATGTGGGTGATTTTGGTTTGGCAAAAGTCATTGACATGCCTCCATCAAAATCAATGTCAGCAGTTGCTGGATCTTATGGCTATATAGCTCCTGAATATGCATATACTATGAAGGTCAGTGAGAAGTGTGACATCTATAGCTATGGGGTTGTTCTGTTGGAGTTGCTAACAGGAAAAACTCCAGTTCAGCCATTGGAGCAAGGAGGTGACCTTGTGACATGGGTCCGAAACTACATTCGGAACCATAACAACACAATGTCGTCTGGTGTGCTGGACAGTCGTCTCAATCTTCAAGACCAAACCACCGTGAACCACATGCTCACTGTCCTCAAAATTGCTTTGCTCTGCACAAACATGACTCCCCTTGACCGGCCATCGATGCGCCAAGTCGTATTGATGCTTATTGAGTCCAACGAGCGAGAAGGGAACTCGGCAATTTCTCCAACTCATGATGAGGATCCTCCTTCCAAAAATGATGATGGCACACGAAAGATTATATGA 3513 0.4136 MPEVYQISNSIIEKVTWVNEFCGNYKAFELCHGFAYLVSQSELTIACAGLLKINMSGNFNKRRGLADRCYCSGILLLLALLLHTTEALNIEGQYLLQLKNSLHDESNRLANWKSTDDTPCGWTGVNCTSDNNPVVWYLNLSSMNLSGTINPSIGGLVHLTYLNLAYNKLMGNIPKDIGNCSRSGYLFLNNNQLEGEVPAELGKLSLLRKLNICNNKISGSFPDELGNLSSLVELVAYTNNLTGPLPRSIGNLRSLTTLRAGGNGISSSLPSEIGGCTSLEVLGLAQNQIGGELPREIGMLQNLKELILWNNQLSGTIPEELGNCTNLDTLALYGNGLVGPLPEEIGNLKSLKKLYIYRNKLNGTIPRSIGNLSLAVEIDFSENFLAGEIPSEISKISGLHLLFLFENQLSGVIPNEFSSLGNLTRLDLSINNLTGPIPLGFQYLTRMSQLQLFDNSLSGNIPQSLGLNSPLWVVDFSDNKLTGRIPPHLCRNSNLMLLNLASNQLYGNIPAGILNCETLAQLLLVQNSLTGGFPSELCKLVNLTAIELNYNKFSGPISPDIVSCQKLQRLHIANNYFTLELPKEIGNLSQLVTFNVSSNSFIGPIPREIVRCKRLQRLDLSQNSFTGSLPDELGTLSQLELLKLSDNKLTGNIPAALGNLLHLTALQMGGNLLSGEIPPDLGNLSSLQIALNLSYNNLTGSIPDKLGSLNLLEFLILNNNHLSGEIPSTFENLSSLMGCNFSYNSLSGPIPSIPIFENMAVSSFVGNNGLCGAPLLDCNTNLSSQSDPPGKSIDSRRSKIITIIATVVGGVSLILIVIILYIMRRPPESVSSLRDSEMPSSDSDIYFPPKDGFTFQDLLEATNNFHESYVIGRGACGTVYKAVMLSGKTIAVKRLASNREGNNIENSFRAEILTLGKIRHRNIVKLYGFCYHHGSNLLLYEYMARGSLGELLHGFSCTLEWPTRFMIALGAAEGLAYLHHDCKPKIIHRDIKSNNILLDENFEAHVGDFGLAKVIDMPPSKSMSAVAGSYGYIAPEYAYTMKVSEKCDIYSYGVVLLELLTGKTPVQPLEQGGDLVTWVRNYIRNHNNTMSSGVLDSRLNLQDQTTVNHMLTVLKIALLCTNMTPLDRPSMRQVVLMLIESNEREGNSAISPTHDEDPPSKNDDGTRKII 1170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa08g0608 1170 SUPERFAMILY L domain-like 442 780 - -
Bisa08g0608 1170 Gene3D Ribonuclease Inhibitor 87 239 IPR032675 -
Bisa08g0608 1170 SUPERFAMILY RNI-like 138 482 - -
Bisa08g0608 1170 FunFam Probable leucine-rich repeat receptor-like protein kinase At2g33170 247 339 - -
Bisa08g0608 1170 Pfam Leucine rich repeat N-terminal domain 91 127 IPR013210 -
Bisa08g0608 1170 ProSitePatterns Serine/Threonine protein kinases active-site signature. 986 998 IPR008271 GO:0004672|GO:0006468
Bisa08g0608 1170 Gene3D Ribonuclease Inhibitor 342 442 IPR032675 -
Bisa08g0608 1170 Gene3D Ribonuclease Inhibitor 240 341 IPR032675 -
Bisa08g0608 1170 SMART LRR_typ_2 636 659 IPR003591 -
Bisa08g0608 1170 SMART LRR_typ_2 252 276 IPR003591 -
Bisa08g0608 1170 SMART LRR_typ_2 420 443 IPR003591 -
Bisa08g0608 1170 SMART LRR_typ_2 660 684 IPR003591 -
Bisa08g0608 1170 SMART LRR_typ_2 709 732 IPR003591 -
Bisa08g0608 1170 SMART LRR_typ_2 300 324 IPR003591 -
Bisa08g0608 1170 SMART LRR_typ_2 156 180 IPR003591 -
Bisa08g0608 1170 SMART LRR_typ_2 204 228 IPR003591 -
Bisa08g0608 1170 SMART LRR_typ_2 348 372 IPR003591 -
Bisa08g0608 1170 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase 830 942 - -
Bisa08g0608 1170 FunFam Leucine-rich repeat receptor-like protein kinase PEPR1 87 246 - -
Bisa08g0608 1170 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase isoform B 340 444 - -
Bisa08g0608 1170 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230 468 782 - -
Bisa08g0608 1170 ProSiteProfiles Protein kinase domain profile. 865 1139 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa08g0608 1170 Gene3D Ribonuclease Inhibitor 454 782 IPR032675 -
Bisa08g0608 1170 Gene3D Phosphorylase Kinase; domain 1 830 942 - -
Bisa08g0608 1170 MobiDBLite consensus disorder prediction 1145 1170 - -
Bisa08g0608 1170 MobiDBLite consensus disorder prediction 1156 1170 - -
Bisa08g0608 1170 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230 943 1155 - -
Bisa08g0608 1170 Gene3D Transferase(Phosphotransferase) domain 1 943 1158 - -
Bisa08g0608 1170 Pfam Protein kinase domain 866 1135 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa08g0608 1170 SUPERFAMILY Protein kinase-like (PK-like) 839 1138 IPR011009 -
Bisa08g0608 1170 SMART serkin_6 865 1138 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa08g0608 1170 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 402 1139 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa08g0608 Bisa-ChrBisa08 10178296 10182246 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa08g0608 110 1138 Receptor kinase-like Gene Family AT1G73080 38.117 0.0 638
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Bisa08g0608 Pkinase 3.5e-48 CL0016