Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa08g0599 ATGAACCAAGATCCAACCCCACAAGAACAAGTTTTGAATTTGAGGCAAATGTTGTACTTCTGTTTCTTCTCTCTTCCTTCAATGTTGAGTGTCTTTCTCTTCCTCACTACTCTCCTCCTATTATGTAGCCCTGTCATCTCTTTTAATCACGAAGCCCATGTGCTTTATTCCTGGCTGCACAGCTCTCCTTCACCACCTCCTTCATATTTCTCAAACTGGAACATCCATGACGAAGACCCATGCAACTGGACCTCTATTGCATGTTCTCCTTCAGGTTTTGTCACCGAGATTAATATAGGTTCTGTCACTCTTCAGCTTCCCTTGCCTTCTAATCTCTCTTCCTTTCCATTTCTCACCAAACTTGTGATATCAAGTGCTAATCTCACAGAGAACATCCCTCTTGATATTGGTGCTTGCTCTACTCTTACTGTCATCAATCTTGGTTCCAATAGTCTCACTGGGACTATCCCTGAAAGTATTGGGAATCTCCGAAGTTTGGAGACTTTGGACTTGAGCTCCAACCTACTTAGAGGGAAAATCCCACATGAGCTAAGCAATTGTGGTGGCCTAAAATATCTCCTCCTATACGATAATCAGGTAGCTGGGACTATCCCACCTTTGCTGGGACAGTTGTTAAAACTTGAGGTTTTTAGAGCAGGAGGGAACCAAGAGATCGTTGGGAATATACCAAAGGAGCTTGGAGATTGTATTAATTTAACTGAGTTAAAGTTGGCAGAAACCAGCATATCGGGCTCTTTGCCAGCTTCATTGGGTAGGCTTAGAAAGCTTCAGAGTTTGGTCATTCATGATGCTAAGTTGTCTGGTGAGATCCCACCTGATATATGGAACTGCTCTGAGCTTGTTGAGTTGATTTTGTACGGTAATAGTCTATCAGGTTCTATTTCACCTAATCTAGGAAAGCTTCAGAAACTGCAGACACTGCTTTTATGGCATAATCATCTTGTTGGGGCTATTCCTGTAGAGATTGGCAATTGCACAAGCTTGAAAATGGTTGATCTTTCTGGGAATTCTCTATCTGGGACTATCCCTTTGTCCATAGGTGGTCTTTTGGAACTTGAAAGGTTCATGATCACTCACAACAATGTCTCCGGTTCTATACCATCAAATCTCGCAAACGCCACCAACTTGCGAAATTTGCAAATTGACCATAATCAAATCTCAGGTTTTATCCCACCAGAGCTTGGGACGTTACAAAAGCTCACTGACCTCTATGCTTGGGACAACAATCTTCAAGGAACCATCCCTTCTACTTTCGCCAACTTGAGTAACCTCCAACTACTAGAGTTGTCTTTCAATGCACTTACTGGTAGCATTCCGGTAAGCCTGTTTCAGCTTCAAAATCTCAAAGTTTTGCTCTTGCTTTTCAATGACATATCAGGTGCAATTCCAACAGAAATAGGTAGTTGCAGCTCTCTTGAAAGGATAAGGCTTACCAACAATAGTATCTCTGGAAAGATTCCTAAGACAATTGGTCGTCTCAAGAACCTAAAATTCTTTGATATCTCAGGGAACCATCTATCTGGGCCAGTGCCAGATGAGATTTGCAACTGCTCAAAGTTAGAAATGATAGACCTCAGCAACAATGACTTAGAAGGTCCACTGCCTAATTCATTGTCATCATTGTCCCATTTGAATGCCTTGAATGCATCGAATAATAGATTTTCAGGTCGCATACCTGCAAGCTTAGGTCATCTTTCTTCCATGAATTTACTAATATTAAGCAAAAATGGATTCTCTGGACCAATACCTTCATCTCTTGGTCTATGTTCAAGTCTCCAAATGCTTGATCTTAGCAGCAATGAACTCACTGGAAGCATCCCAAAAGAGCTAGGTAACATTGCAACTCTCTCCATTGCTCTTAACCTTAGTCACAATTCTCTTAGCGGGTCAATCCCTTCGAAGATCTCTCAACTTTCCAAGCTTTCAGTGCTGGACATATCACATAACATGTTGGAGGGAGGCTTGCAGCCTCTTGCCGAGCTTGAAAACCTTGTCTCTCTCAATATTTCTTACAATAACTTCACAGGATTTCTTCCTGAGACTAAGATTTTTAGACAGCTATCCCCAGCAGAACGAACGGGAAATGAAGGTCTTTGTCATCCCTGCTTTAAAAGTCAAGCAAACATTGAACTATCAACCAAAAGCACTATGAAGCCATTAGTGCTTAAACTAGTGATGGGATTGCTGGTAGTGTTGACAATGATACTCACAGCTCTAGGGATAAATGCAGTTTTAAAGGCCAGAAGAATCAGCAGAGACAGTGATTTAGAAATGACAGGCTCATGGCAATGGCAGCTCACTCAATTCCAGAAGCTAAACTTTTCAACTGAACAAGTACTTAAATGTTTAGTGGATGAGAACATAATTGGAAGAGGATGCTCTGGAGTCGTGTATCGGGTATATATCAGTAATAATGAAGTTATAGCTGTGAAGAAACTGTGGTCAAATACAACGGTTGCTTGTGAAGGACCTAACAATGACCAGAGTGGAGCTCGTGACTCATTCTCTAGAGAGGTTCACGCCCTTGGCTCAATCCGACATAAGAACATTGTGAGATTCTTAGGATGTTGTTGGAATCGAACCACAAGATTGCTTATGTATGACTACATACCAAATGGGAGCTTGGGGACTTTACTTCATGAGAATATTGGAAATCCTCCTTTGGAATGGGGAGTGAGGTATAAAATCTTGTTGGGAGCTGCGCAAGGCCTTGAGTATCTCCACCATGATTGTGTCCCTCCAATAGTCCATAGAGACATCAAAGCCAATAACATCCTCATTGACCATGAATTTGAAGCTTATCTTGCTGACTTTGGCTTGGCCAAGCTCGTTGATAATGATGAGTTTGGCAGGTCCTCAAGTACCATTGCTGGTTCTTATGGGTATATTGCTCCAGAGTACGGCTACATGATGAGGATTACAGAGAAAAGCGATATTTATAGTTTTGGGGTAGTTTTGCTGGAAGTGTTGACAGGTAAGGAGCCAATAGATCCCACCATACCAGACGGGTTACATATTGTTGATTGGGTGAGACGAGAAAGAGGACAAGTTGAAGTTCTGGACCCTGCCTTGCAATCTGCACCGGAATCAGAAATACAAGAAATGAAGCAAGCATTAAACATTGCCCTACTGTGCTCAAGTTCTGCCCCAGATGAAAGACCTACAATGAGAAATGTGGCAGCAATGATAAAGGAGATCAAGCATTGGAGAGAGGAGTATCCACAGGTTGATACCCTCGTAAATGACTCTTCTTCATCAGAAATCACTGAGCTTCCTCCACAATCTTCAAACGCTCAAGGACCTCCAAGCTTGATTTAG 3339 0.4205 MNQDPTPQEQVLNLRQMLYFCFFSLPSMLSVFLFLTTLLLLCSPVISFNHEAHVLYSWLHSSPSPPPSYFSNWNIHDEDPCNWTSIACSPSGFVTEINIGSVTLQLPLPSNLSSFPFLTKLVISSANLTENIPLDIGACSTLTVINLGSNSLTGTIPESIGNLRSLETLDLSSNLLRGKIPHELSNCGGLKYLLLYDNQVAGTIPPLLGQLLKLEVFRAGGNQEIVGNIPKELGDCINLTELKLAETSISGSLPASLGRLRKLQSLVIHDAKLSGEIPPDIWNCSELVELILYGNSLSGSISPNLGKLQKLQTLLLWHNHLVGAIPVEIGNCTSLKMVDLSGNSLSGTIPLSIGGLLELERFMITHNNVSGSIPSNLANATNLRNLQIDHNQISGFIPPELGTLQKLTDLYAWDNNLQGTIPSTFANLSNLQLLELSFNALTGSIPVSLFQLQNLKVLLLLFNDISGAIPTEIGSCSSLERIRLTNNSISGKIPKTIGRLKNLKFFDISGNHLSGPVPDEICNCSKLEMIDLSNNDLEGPLPNSLSSLSHLNALNASNNRFSGRIPASLGHLSSMNLLILSKNGFSGPIPSSLGLCSSLQMLDLSSNELTGSIPKELGNIATLSIALNLSHNSLSGSIPSKISQLSKLSVLDISHNMLEGGLQPLAELENLVSLNISYNNFTGFLPETKIFRQLSPAERTGNEGLCHPCFKSQANIELSTKSTMKPLVLKLVMGLLVVLTMILTALGINAVLKARRISRDSDLEMTGSWQWQLTQFQKLNFSTEQVLKCLVDENIIGRGCSGVVYRVYISNNEVIAVKKLWSNTTVACEGPNNDQSGARDSFSREVHALGSIRHKNIVRFLGCCWNRTTRLLMYDYIPNGSLGTLLHENIGNPPLEWGVRYKILLGAAQGLEYLHHDCVPPIVHRDIKANNILIDHEFEAYLADFGLAKLVDNDEFGRSSSTIAGSYGYIAPEYGYMMRITEKSDIYSFGVVLLEVLTGKEPIDPTIPDGLHIVDWVRRERGQVEVLDPALQSAPESEIQEMKQALNIALLCSSSAPDERPTMRNVAAMIKEIKHWREEYPQVDTLVNDSSSSEITELPPQSSNAQGPPSLI 1112
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa08g0599 1112 SMART serkin_6 790 1074 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa08g0599 1112 SMART LRR_typ_2 668 693 IPR003591 -
Bisa08g0599 1112 SMART LRR_typ_2 500 524 IPR003591 -
Bisa08g0599 1112 SMART LRR_typ_2 308 332 IPR003591 -
Bisa08g0599 1112 SMART LRR_typ_2 428 452 IPR003591 -
Bisa08g0599 1112 SMART LRR_typ_2 260 284 IPR003591 -
Bisa08g0599 1112 SMART LRR_typ_2 163 187 IPR003591 -
Bisa08g0599 1112 FunFam LRR receptor-like serine/threonine-protein kinase RCH1 877 1088 - -
Bisa08g0599 1112 Pfam Leucine Rich Repeat 526 548 IPR001611 GO:0005515
Bisa08g0599 1112 FunFam Nuclear pore complex protein NUP107 48 206 - -
Bisa08g0599 1112 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 320 1069 - -
Bisa08g0599 1112 Gene3D Transferase(Phosphotransferase) domain 1 877 1092 - -
Bisa08g0599 1112 FunFam Putative LRR receptor-like serine/threonine-protein kinase 626 709 - -
Bisa08g0599 1112 Pfam Leucine rich repeat N-terminal domain 49 89 IPR013210 -
Bisa08g0599 1112 Gene3D Ribonuclease Inhibitor 46 240 IPR032675 -
Bisa08g0599 1112 FunFam LRR receptor-like serine/threonine-protein kinase RCH1 223 446 - -
Bisa08g0599 1112 Pfam Leucine rich repeat 406 465 IPR001611 GO:0005515
Bisa08g0599 1112 Pfam Leucine rich repeat 141 199 IPR001611 GO:0005515
Bisa08g0599 1112 FunFam LRR receptor-like serine/threonine-protein kinase RCH1 766 876 - -
Bisa08g0599 1112 ProSiteProfiles Protein kinase domain profile. 790 1083 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa08g0599 1112 Gene3D Phosphorylase Kinase; domain 1 761 876 - -
Bisa08g0599 1112 Gene3D Ribonuclease Inhibitor 449 716 IPR032675 -
Bisa08g0599 1112 Gene3D Ribonuclease Inhibitor 241 348 IPR032675 -
Bisa08g0599 1112 SMART LRR_sd22_2 645 673 - -
Bisa08g0599 1112 SMART LRR_sd22_2 596 622 - -
Bisa08g0599 1112 SMART LRR_sd22_2 428 449 - -
Bisa08g0599 1112 SMART LRR_sd22_2 163 186 - -
Bisa08g0599 1112 SMART LRR_sd22_2 524 550 - -
Bisa08g0599 1112 ProSitePatterns Protein kinases ATP-binding region signature. 796 819 IPR017441 GO:0005524
Bisa08g0599 1112 FunFam LRR receptor-like serine/threonine-protein kinase 546 621 - -
Bisa08g0599 1112 SUPERFAMILY L domain-like 397 710 - -
Bisa08g0599 1112 PRINTS Leucine-rich repeat signature 645 658 - -
Bisa08g0599 1112 PRINTS Leucine-rich repeat signature 599 612 - -
Bisa08g0599 1112 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 447 541 - -
Bisa08g0599 1112 MobiDBLite consensus disorder prediction 1086 1112 - -
Bisa08g0599 1112 Pfam Protein kinase domain 792 1066 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa08g0599 1112 ProSitePatterns Serine/Threonine protein kinases active-site signature. 922 934 IPR008271 GO:0004672|GO:0006468
Bisa08g0599 1112 SUPERFAMILY Protein kinase-like (PK-like) 770 1070 IPR011009 -
Bisa08g0599 1112 SUPERFAMILY L domain-like 56 417 - -
Bisa08g0599 1112 Gene3D Ribonuclease Inhibitor 349 448 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa08g0599 Bisa-ChrBisa08 10015713 10019171 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa08g0599 44 1086 Receptor kinase-like Gene Family AT5G56040 45.506 0.0 884
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Bisa08g0599 Pkinase 1.2e-40 CL0016