Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa08g0591 ATGGAACGGTTTCCTCTCGCTCTCTCTTTCTCTCTCAAGCATTGCCTCACAAACAAACCCGTTTTCTGGTTTCACCAAACCCCAAAGTACTCAAACTGCAATTTTATTTTCTTTTCGGTGTTTCATGAATTCCGACGGTTCCCAAATCTTCCCTTCCCCGTACAGCAGCCTCCCGAGCTTGCATTTCATGCTTTCAGCGAATTTATGGACACACAGACAGAGTTCAAATTCAGAAGTTCCTTAATGGAGCTTATTTGTACACCAGGCCTGCATTATAAAAGTGCAGGGACTGCTGGTTCAAGTGATAGAATCCTTTCAGATTACAATGAAGACAATATATGTCCGCAGACGGGTGAAGAATTTTCAGCTGAGTTCTACCGGGATAGGTTTGGTTTAAGGAGACAACCTGTCACAACTGATGTGGATAATCGCCAGCCAAATAGATTGGGTTTTGATTTGAATCAGAATTATCAGCTGGGTTATGAGGATCTTGCACGCTTATTGGCACTAAGGAGAATGGATTCTGATACTAACTCAGATTTGTCAGATTTTGCTCCAGCAACAGCATATGTTGCTGAACCTGAAAACAGGGCTTATCCTAACAATTTGTACACATCCCAGGGTGAATGTGGTAGTTTTGGACAACTTTCAGCTGAGTCCCCTCGGTCATCTCATCCTTGTCAAGCAGCATTTCCAGAAGCTTCTCCTTTTAAGAAGATAAAGTTTCTTTGTAGCTTTGGAGGAAGAATATTACCAAGGCCAAATGATGGGAAGCTCAGATATGTGGGTGGAGAAACACGAATTATATCCATTGGAAAAAACAATACTTGGAAGCAACTTATGGAGAAGACTAATGCAATTTGCAATCAAAATCACATTATCAAATACCAGCTTCCTGGAGAGGATCTGGATGCTCTTATTTCTGTTTGTTCTGATGAGGATCTTCATCATATGATAGAGGAATATGAAGAACAGGAAAGAATTGGAGGCTCTCAACGGTTGCGAATATTTCTGATATCTTCAAATGAACCTGAGAGCCCAAACTCTATTGAAGCAAGAGTCAGTCAGCCAGGTGATGTTGATTATCAATATGTTGTCGCCGTTAATGGCATGCTCCCAAGTCCACGGAAGAGCTCTAGTGGGCAAAGTTTGGCAAGCCATTCAAGCCAGTTTGGAAACTCCTCTGATTTCAATAGTCCAAGATTTTTTAAGGAACCACCTACAACTGCATTTGCTTGGGATGTGAAGGATTGCAGCCCAAGGTCCCCGCATTTGGGAGGATTACTCTCAAGACCTGGTGGTCCTCAGTTTTTAACACCACTTCAAGTGCCAGGCAGGTCATTCACTCAATCAAACCCAACTAGTCCTATGCCTCGTATTTATGCTCAGCCAAAAGATCCTAAAATTTGCAATGTAGAGCTATATGTGGATCAACCATGCAATGTTGTTAATGAAAGCCTTATTCCCTTGGTACCACAAAGAATTCAATGCGACAATTCCCTGTACAGAGACCATGCCAATTATATAGATCCCATTGCATACTGTAACAATCTTACTCAAGGGCCTCCCTTTCAGAATTACCATCTTAATAATCAACATATAGTGGAGGCTGCTCAGCCCAAGAATCCCAGTGATGATGTTCAATTTCACACGAGAAGCTACAGTGATGATTTTGCCTCTTCTGCAATGTTTGGACAAATCGATATGATATTTGAGAGACCCACACACACAAATGAAGGTTCATACCATTCTGACAAGAGTGTCCCTCATCCTGAAGGGCCATCATTATCAATTTCTGTGTCTAAGTCTAATAATAGAGATAAAGAGGGATCTCATTGCAGATTGTTGCATGCCCTTTCTGACCCATTATTGCAGAAGAGTGGTGAGATCTTTGAATATCATTTGCAGCCCTCCCACAGAGTTAACGGAAAAAAACCACCTTTACCAGAAATTTTAAGTTCCTTTCACGAAAGGCCATTACAGCAGGGAGAAATAATTGACAGGAAAGACCAGGAGACTAAGCATCACATGCTGCCCAGTTTTGGTATGACTGAAAGTCGCAAGGGGATTTTGGATCCTATTCAAGAAAGCTTGTTCTGTGCAGGAAATAATAATGCCTCCTCTGATGAAACAGGAAGATACTTTGAAGGTAATATTGAAGTTCCATCACATGACAATGTCTTGGGAATTAAAGGTTTGGAGCACATCAACTACCAACAAGGTGCTTGCTTGGCTTCACCAAAGTTAAAAAGCGGTCAACACAATTTATCTGCTTCCTCATTAAATTTTGAATCCAAAAGAAACCTGGAGGAACCACATGGTCGGCAACTAGACACAGCTGCTTCTGAGTTTTTCATGAGGAGCCAAAATTCTACAATGTATGACCAATTACTTATGTTCGAGACAGAAAACAGCCAATCATTACCCCTTGGCTCCTCTGATTTACAGCTTGTTGACACCGAAACTGACATAGAGTCCATACTGCTAGTCTCTAATACAGACACGGGTGCATCTTCCAAAGGTGAGACATTTCTCCCTGATGAGAATCCTGCCAACTGTCCTCACCAGAAGAATGAAGAAACAGTCATTAACCAAGATTCTTATGTGGGCCATAGCAATGGGTTATGTGACCAATCACAGAGTTCTGTTCAGGAAATCATGAAGCCTGAACCACTAGCTGTTGTCAAAGGACCAACTGCTAGTGTCTCTTCAGGTATTCAGTCATTCTCAAAAATTGTTTTAGATGTAGTTGAAGAGATTGAATCTCAATCTGCATCTCCTGAAAGGGAAGAGACAGAGAGTGTCAGTTCAGAACCTCAAAGTGAGCTTGCAAAAGATGATAATACAAACTTCAAGAAGCTTATTGGGCTAGAAAATCCTGAAATAGAGGCTGAAATCTATGGTTTGCAGATCATTAATCCAGATAAGGAAAATTCATTCGCTAATTGTCAAGAAAAAGGGGAAAAAGCTATGGTGAAATTGGAATTTCTAAACTGCATTATTAAGAATGCTGATATTGAAGAACGGCGAGAGTTAGGATCTGGAACATTTGGAACTGTTTATCATGGAAAGTGGAGGGGAACAGATGTTGCAATTAAGAGAATAAATAGTAGTTGTTTTTCTGGCAGAGTATCAGAGCAAGAGCGGTTGACTAAAGATTTCTGGCGAGAGGCAAAAATTTTGTCAACTCTTCACCATCCAAACGTGGTGGCCTTTTATGGGGTAGTTCCAGATGGCCCAGATGGGACATTGGCAACTGTAACAGAATATATGGTGCATGGATCACTGAGGAATGTCCTATTGAAGAAGGATAAAGTGCTTGACCACCGAAGAAGGCTTATGATTGCAATGGATGCAGCTTTTGGCATGGAATATTTGCATTTAAGGAATATTGTTCATTTCGATTTGAAGTGTGATAATTTACTCGTCAACTTGGGGGATCCCGAACGACCTATATGCAAGGTTGGTGATTTTGGCCTATCAAGAATTAAGCGCAACACACTTGTTTCTGGTGGTGTCAGAGGAACCCTTCCCTGGATGGCACCGGAATTATTAGATGGTAGCAGTACTGGGGTCTCTGAGAAGGTTGATGTTTTCTCATTTGGCATTGCAATGTGGGAAATATTGACTGGAGAAGAGCCATATGCTAACTTGCACTGTGGTGCTATAATAGGAGGGATTGTCAGTAACACACTCAGGCCTGTTATTCCAAAACGTTGTGATTCTGAATGGAAAAAGCTGATGGAACATTGCTGGAGCCCTGATCCTGAAGCCAGGCCAACCTTCACAGAAATAACACAGAGATTTCGCACCATGCAAGTGGCTCTGCAGAAGAAGAGACTCAATGCTGCACATGGATAA 3861 0.416 MERFPLALSFSLKHCLTNKPVFWFHQTPKYSNCNFIFFSVFHEFRRFPNLPFPVQQPPELAFHAFSEFMDTQTEFKFRSSLMELICTPGLHYKSAGTAGSSDRILSDYNEDNICPQTGEEFSAEFYRDRFGLRRQPVTTDVDNRQPNRLGFDLNQNYQLGYEDLARLLALRRMDSDTNSDLSDFAPATAYVAEPENRAYPNNLYTSQGECGSFGQLSAESPRSSHPCQAAFPEASPFKKIKFLCSFGGRILPRPNDGKLRYVGGETRIISIGKNNTWKQLMEKTNAICNQNHIIKYQLPGEDLDALISVCSDEDLHHMIEEYEEQERIGGSQRLRIFLISSNEPESPNSIEARVSQPGDVDYQYVVAVNGMLPSPRKSSSGQSLASHSSQFGNSSDFNSPRFFKEPPTTAFAWDVKDCSPRSPHLGGLLSRPGGPQFLTPLQVPGRSFTQSNPTSPMPRIYAQPKDPKICNVELYVDQPCNVVNESLIPLVPQRIQCDNSLYRDHANYIDPIAYCNNLTQGPPFQNYHLNNQHIVEAAQPKNPSDDVQFHTRSYSDDFASSAMFGQIDMIFERPTHTNEGSYHSDKSVPHPEGPSLSISVSKSNNRDKEGSHCRLLHALSDPLLQKSGEIFEYHLQPSHRVNGKKPPLPEILSSFHERPLQQGEIIDRKDQETKHHMLPSFGMTESRKGILDPIQESLFCAGNNNASSDETGRYFEGNIEVPSHDNVLGIKGLEHINYQQGACLASPKLKSGQHNLSASSLNFESKRNLEEPHGRQLDTAASEFFMRSQNSTMYDQLLMFETENSQSLPLGSSDLQLVDTETDIESILLVSNTDTGASSKGETFLPDENPANCPHQKNEETVINQDSYVGHSNGLCDQSQSSVQEIMKPEPLAVVKGPTASVSSGIQSFSKIVLDVVEEIESQSASPEREETESVSSEPQSELAKDDNTNFKKLIGLENPEIEAEIYGLQIINPDKENSFANCQEKGEKAMVKLEFLNCIIKNADIEERRELGSGTFGTVYHGKWRGTDVAIKRINSSCFSGRVSEQERLTKDFWREAKILSTLHHPNVVAFYGVVPDGPDGTLATVTEYMVHGSLRNVLLKKDKVLDHRRRLMIAMDAAFGMEYLHLRNIVHFDLKCDNLLVNLGDPERPICKVGDFGLSRIKRNTLVSGGVRGTLPWMAPELLDGSSTGVSEKVDVFSFGIAMWEILTGEEPYANLHCGAIIGGIVSNTLRPVIPKRCDSEWKKLMEHCWSPDPEARPTFTEITQRFRTMQVALQKKRLNAAHG 1286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa08g0591 1286 SMART serkin_6 1006 1275 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa08g0591 1286 Gene3D Phosphorylase Kinase; domain 1 999 1093 - -
Bisa08g0591 1286 SUPERFAMILY CAD & PB1 domains 255 345 - -
Bisa08g0591 1286 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 259 341 - -
Bisa08g0591 1286 SMART PB1_new 254 341 IPR000270 GO:0005515
Bisa08g0591 1286 ProSiteProfiles Protein kinase domain profile. 1006 1276 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa08g0591 1286 Pfam Protein tyrosine and serine/threonine kinase 1007 1268 IPR001245 GO:0004672|GO:0006468
Bisa08g0591 1286 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1131 1143 IPR008271 GO:0004672|GO:0006468
Bisa08g0591 1286 SUPERFAMILY Protein kinase-like (PK-like) 996 1267 IPR011009 -
Bisa08g0591 1286 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 1094 1285 - -
Bisa08g0591 1286 Pfam PB1 domain 255 338 IPR000270 GO:0005515
Bisa08g0591 1286 MobiDBLite consensus disorder prediction 576 609 - -
Bisa08g0591 1286 MobiDBLite consensus disorder prediction 922 936 - -
Bisa08g0591 1286 PANTHER SERINE-THREONINE PROTEIN KINASE 306 1272 - -
Bisa08g0591 1286 MobiDBLite consensus disorder prediction 922 946 - -
Bisa08g0591 1286 Gene3D Transferase(Phosphotransferase) domain 1 1094 1285 - -
Bisa08g0591 1286 PRINTS Tyrosine kinase catalytic domain signature 1125 1143 IPR001245 GO:0004672|GO:0006468
Bisa08g0591 1286 PRINTS Tyrosine kinase catalytic domain signature 1196 1218 IPR001245 GO:0004672|GO:0006468
Bisa08g0591 1286 PRINTS Tyrosine kinase catalytic domain signature 1088 1101 IPR001245 GO:0004672|GO:0006468
Bisa08g0591 1286 PRINTS Tyrosine kinase catalytic domain signature 1240 1262 IPR001245 GO:0004672|GO:0006468
Bisa08g0591 1286 CDD PB1_UP2 243 339 - -
Bisa08g0591 1286 ProSitePatterns Protein kinases ATP-binding region signature. 1012 1033 IPR017441 GO:0005524
Bisa08g0591 1286 Gene3D - 258 342 - -
Bisa08g0591 1286 MobiDBLite consensus disorder prediction 374 399 - -
Bisa08g0591 1286 CDD STKc_MAP3K-like 1012 1269 - -
Bisa08g0591 1286 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 999 1093 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa08g0591 Bisa-ChrBisa08 9844431 9853278 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa08g0591 116 389 MAP Kinase Kinase Kinase AT1G16270 40.288 1.06e-40 162
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-6 Bisa08g0591 PK_Tyr_Ser-Thr 3.5e-62 CL0016