Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa08g0577 ATGGACATGGACCTGGATATGGACATTCCCCTTCCAGAAGAGCTTGAATTGCTGGAATCGAATGCTTATCTTGACGAAGTCTACCCGGACCTGGACCCGCCGGAACCCTACCCGGAGGAAGACCAAGAATCACCGCCAGCAGCACAACTAACTCCGTCCCCGGATCTTCAATTCGACTCCGAAGTTGAAATCATTGATCGCAAGCGTTCCAGGTCGGACAGTCCTGATGGGTCACTTTCAGAAGCTGCGGTGCTGCCGGAGGAGAAAAGGAGCAGGACTGACGATTCGGTGCGGGAGGCTGATCAGGACTGGCTTCTCTACTCTCCAAGGCAGCGGAGCGATCCTGTGGTGGGAGAGCAAGTGAGCTTTTTGAAGGAGAAGATGTTATCCAGGTATGCATCGGAAATTGACGGGGAGTGTATACCGGTCACTGCACCCAATGGCGACAGGGTTTATGCGAAGTTAAATAGGTTGGAAGGGGAGGAACGGTTGAAGAAACTAGATGTGAGAACAAATTCTAATGATCTTATCTTAGAACCCATTCATATTCTATTTGAGAAATTGGAGCAAGAGGCTTTCACTAAGACATTGAAAGCTAGTTCCGAATGCCAAGGTGTTCCAGATGTTCCTGAAACATCAATTGTCCATGAGAAACTTTGGGTAGATAAGTATACTCCAAAATCGTTTACTGAACTTCTTAGTGATGAACATACAAATCGTGAGGTACTGCTGTGGTTGAAGCAATGGGATTCTACTGTTTTTGGAACTGAAATTCGAAGTACATCAGATGAGGTTTTGTCTGCTTTGAAACGACATTCTGCTATTGCCCAGCATCAGAAACCTTTAGATTCAAAGTTTCCCAGGATGAACAGAGGACCAAAATGGAATAGCAGCAGATATAGACATTCTAGAAGTATGGATGAAAGTGGTAATTCAAAGAGCATTCAGGATATGCTGAATAAGAAGACAAAGCATATCGGTCCACCAGAACAGAAGATCCTTTTGCTTTGTGGTCCACCGGGCCTTGGAAAAACTACACTTGCACATATAGCTGCTAGACATTGTGGATATCACGTGGTGGAGGTTAATGCCAGTGATGATCGTAGTACAGCGACAATTGAAACCAAAATCGTTGACGTTGTTCAGATGAACTCTGTCATGTCTGATTCAAGACCAAAGTGCCTGGTGGTGGATGAAATTGATGGAGCACTTACAGATGGCAAGGGTGCTGTGGAGGTTCTTTTAAAGATGGTTTCTGGTGAAAAGAAATCTGATGTGGGAAAGGAAAATTTGGCAAAAGAGCAACCTGGAAGGAAGGCTTCAAAGAAGGGCCGTAATACAGCATCACTGTCGAGACCTGTAATTTGCATTTGCAATGACCTATATGCTCCTGCCTTGAGACCATTGCGCCAGGTAGCAAAGGTTCATATATTTGCTCAACCAACAGTTAGTCGTGTTCTAAGCAGGCTCAAATATATATGTAACAAGGAGGGGATGAAAGCTAATGCTGTTGCACTTACTGCTCTGGCGGAATATACAGAATGTGATATACGCTCATGCTTAAACACACTCCAATTTCTCAGCAAGAAGAAAGAAACCCTTAATGCGTTTGATATTGGTTCTCAAGTAGTTGGCCGGAAAGATATGTCAAAGAATGTTCTGGACATCTGGAAAGAGGTTTTCCAAAGGAAAAAAACAAAGATGGAAAGAAAATCTCACAATAGCATGCCCTTTGAGTTTAACTCCTTGTATTCCTTAGTATCAAATCGGGCTGACCATGACTTGATTCTCGATGGAATTCATGAAAACATTTTGCAGCTCAATTATCATGATCCATTGATGCAGAAATCTGTTAAGTGCTTGAATAGTCTGGGAGTTTCTGATCTACTGCATCAGTATATTATGCGTACACACCAAATGTCCCTTCAGGTTTATTTGCCCCCCATAGCAATTACTGTACATCGCCAAGTAGCGCAAGTTCAAAAACCAAACATTGAGTGGCCAAGGTCCTATCAAAGGTATCAAACAACGAAAAAGGAAAAGATGGACATTTTGAACACTTGGCACTACAAAATTCCACCACATCTTGCGAGGCATTTATCAGCTATTTCCTTTGTTGAAGACTTAATTTCTCCATTATTACATATTTTGTCCCCTCCAACCATAAAACCGGTGGCATCACAATTATTATCTGATAAAGAGAAAAATGATCTTGCTCAATTAGTTAGCACAATGGTCTCTTATTCTATAACATATAAGAATATAAAATCAGACATGCTGCCTAATAGCCTGAGACATGAAGTAGCAGATGACTTAACATTATCTTTTGATCCTCCAATCGGTGACTTCATAAATTTTAAGGATTATACCTCAAATCATTACGTGCTTTCTTTAGCTATGAAGCAGATTCTTGTGCATGAGGTTGAAAAGCAAAAGATCTTGCAAGTAAATATTGACAGGCCTTTGGGAAATGGATGCAGCAGCAGGAGGCATGAATTTACTGAGGTTGGAACTAGCAATGCCGAATCATCCAAAATCAATCACACAGATGAAATTTCTGTGAAAAAAATTCAAAACGAAAAGAATGTCTTGGAAGCAAGGCAATATAATGCAAATGCTACCACAGTTTCACCGAACTTGCATCCTGATAAAGGTGCGACAGACAAAGTGAAACTGTTAAACACAGGAAGAAAGCCTTCTGGTGGTTCCTTTTTTGACAGGTTCAGAAACTTAAGTAGTAGAGGTTTTCAAAGTGACGATAGAACTGAACAGAAAGAAGCAACATTGGAGAAAGATCCACGCCCATTACTATTTAAATTCAACGAGGGTTTTACAAACGCAGTCAAGAGGCCTGTTCGTATGCGTGAATTTTTACTCTGA 2880 0.416 MDMDLDMDIPLPEELELLESNAYLDEVYPDLDPPEPYPEEDQESPPAAQLTPSPDLQFDSEVEIIDRKRSRSDSPDGSLSEAAVLPEEKRSRTDDSVREADQDWLLYSPRQRSDPVVGEQVSFLKEKMLSRYASEIDGECIPVTAPNGDRVYAKLNRLEGEERLKKLDVRTNSNDLILEPIHILFEKLEQEAFTKTLKASSECQGVPDVPETSIVHEKLWVDKYTPKSFTELLSDEHTNREVLLWLKQWDSTVFGTEIRSTSDEVLSALKRHSAIAQHQKPLDSKFPRMNRGPKWNSSRYRHSRSMDESGNSKSIQDMLNKKTKHIGPPEQKILLLCGPPGLGKTTLAHIAARHCGYHVVEVNASDDRSTATIETKIVDVVQMNSVMSDSRPKCLVVDEIDGALTDGKGAVEVLLKMVSGEKKSDVGKENLAKEQPGRKASKKGRNTASLSRPVICICNDLYAPALRPLRQVAKVHIFAQPTVSRVLSRLKYICNKEGMKANAVALTALAEYTECDIRSCLNTLQFLSKKKETLNAFDIGSQVVGRKDMSKNVLDIWKEVFQRKKTKMERKSHNSMPFEFNSLYSLVSNRADHDLILDGIHENILQLNYHDPLMQKSVKCLNSLGVSDLLHQYIMRTHQMSLQVYLPPIAITVHRQVAQVQKPNIEWPRSYQRYQTTKKEKMDILNTWHYKIPPHLARHLSAISFVEDLISPLLHILSPPTIKPVASQLLSDKEKNDLAQLVSTMVSYSITYKNIKSDMLPNSLRHEVADDLTLSFDPPIGDFINFKDYTSNHYVLSLAMKQILVHEVEKQKILQVNIDRPLGNGCSSRRHEFTEVGTSNAESSKINHTDEISVKKIQNEKNVLEARQYNANATTVSPNLHPDKGATDKVKLLNTGRKPSGGSFFDRFRNLSSRGFQSDDRTEQKEATLEKDPRPLLFKFNEGFTNAVKRPVRMREFLL 959
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa08g0577 959 MobiDBLite consensus disorder prediction 83 98 - -
Bisa08g0577 959 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 218 535 IPR027417 -
Bisa08g0577 959 PANTHER P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASES SUPERFAMILY PROTEIN 6 959 - -
Bisa08g0577 959 MobiDBLite consensus disorder prediction 22 98 - -
Bisa08g0577 959 MobiDBLite consensus disorder prediction 60 75 - -
Bisa08g0577 959 Pfam ATPase family associated with various cellular activities (AAA) 334 460 IPR003959 GO:0005524|GO:0016887
Bisa08g0577 959 Gene3D - 217 480 IPR027417 -
Bisa08g0577 959 SMART AAA_5 330 484 IPR003593 GO:0016887
Bisa08g0577 959 FunFam Chromosome transmission fidelity protein 18 481 548 - -
Bisa08g0577 959 CDD AAA 329 419 - -
Bisa08g0577 959 CDD HLD_clamp_RFC 481 539 - -
Bisa08g0577 959 MobiDBLite consensus disorder prediction 425 441 - -
Bisa08g0577 959 MobiDBLite consensus disorder prediction 425 446 - -
Bisa08g0577 959 Gene3D - 481 552 - -
Bisa08g0577 959 MobiDBLite consensus disorder prediction 277 314 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa08g0577 Bisa-ChrBisa08 9589023 9606829 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa08g0577 331 528 Core DNA Replication Machinery Family AT5G22010 30.516 1.61e-14 76.3