Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa08g0564 ATGACTGTTCTTGTTCCTGAGGTTCGATTGAATGTGGTTTTCGTTTGCATCACTTTTGTCGACCGATTGCTTCATTTCATTTGTCTCTAGCTGAAACTGAAGCTGCTGTATACAAAGTTTTCAATGAGCACTATTGGATATAATTCAGATGAGGAACGCTCTGTCATAGGAGAAAAGGCAGAAATAGGGTTTCTTGATTTCGAGGAAGAGAAATCTGTTTGTAGTTACACTCCTAATGAAGAGGATCCTATTGTCATATCTTTCCCTTTTCCTTTGGTGAATGGCCAACCTCAATCAGTAGTTATTGGAGTTACTGCTGTAGATTTAATAACCATTAAGAATACTACTGATGAACCAGTGGAACTGTGGAGTGTCCATATTCTTGCTTCAAATCCTGAGGACTGTTTCACACTTTCTCTGATGGAACCTCCATCAGAAAATTCAAATGCAGATAGTGGTAGAGGCTTTTTAGAGTCTTTCTCTTTGGAGGACAGGATGCTTCAACCTGGTGAAATTTTAAAAGTATGGTTGTCTTGTAAAACAAAGGATATGGGTTTGCACAGCACGGTTGTGTATTTTGACGCAGGAGATGCAAGTATAGAAAGGGTCGTTTTTCTCTTAGTTGAAGACAAGCTCTCCCAGTCTTTGGCTTCTAAGAAGCCTTATTCAAAAGGAAGGAAAAAAGACAAATTGGTTGTGGATACTTTGGTTGCTGGCTCACGTCCTGCAAGGAAGGGAAATCGTGCATACAAAAATTGGCTTCCACGATATGAAATCCCCAGGGACATGAGAGAATTGCTTGAGAGCAAGCAGATCCCTGATGTTATTGTGGGAGGTCTTACAAGGAAGAGTTATGTATCTTATTTCAAAACATTAGTGATGATGGAAGAAATACAATTGGAGGAAGACATGAGGACTTACGATATGGAATGCGTAACTATGAGAAAGAGGGCAAATCAATTCTTGTCTCTGGAGGTTCCGGGGCTTGCTGAGAGAAGACCATCACTGGTTCATGGGGATTTTATTTTTGCAAAGCTAGCCTCTGAAAAGGATGATCCCACTATACCTGCCTATCAGGGATTTGTCCATCGTGTTGAGGCTGATGAAGTATTTTTAAAGTTTGATGCTCAATTTCACTTGTACCACAAAGATAAAGATCTCTACAATGTTCACTTCACATATAATAGGATCAATATCAGAAGGTTACATCAGGCAGTTGAGGCAGCGGAAAAGTTAGGAAGAGAGTTCCTATCTCCACATGAGACATCTAGAAGCAGGCTCATTAAAACTGCTGATCTGGTGCCTATAACTGGTAATCTTAATGAGGAGCAGATGTTTGCAATTAAGAAGATTCTTGGCTGCAAAGGCGCGCCACCCTATGTGATTCATGGCCCTCCAGGTACAGGGAAGACTAAGACAATAGTAGAAGCAATCCTCCAACTCTACAAAAATCGGAGGAATGCTTGTATACTTGTTTGTGCACCCTCAAATAGTGCCGCAGACTACATATTGGAGAAACTTCTTGGTCAAAAGGCTGTCGAATTTCAAGATGATGAAATATTCAGGCTCAATGCATCTACCAGGCCTTATGAGGAACTGAAACCTGAAGTTCTCCGCTTCTGTTCCTTTGATGAGTTCGTATTCAAGTGTCCTCCTGTCAGTGTCCTCATGCATTATAAGATCATAATATCGACTTACATGAGTGCGTGCCTTCTTTACTCAGAAGATGTCATCCGGGGTCACTTTTCTCACATTTTCTTGGATGAGGCTGGCCAAGCTTCGGAACCAGAAAGCATGATCCCTATATCCCATCTCTGCAAAAGGGAGACTGTTGTCGTCCTTGCTGGAGATCCAATGCAGTTAGGTCCAGTAATATATTCCAAGGAAGCAGATGACTACGGATTGGGGAAATCATACTTGGAAAGATTGTTTGAATGTGAATTATACTCCAATGGGGACGAAAATTATGTAACCAAACTGGTTAGAAACTACAGATGTCACCCTCAAATTTTACATCTCCCTTCCAAGCTGTTCTATGAAGGCGAATTGATTGCATGTAAAGATGATACTAGTTTTTCAATGATAAGTGAAGACTTCCTCCCTAATAAGGAGTTCCCTGTTCTTTTTTTTGGTATCCAAGGATGTGATGAAAGAGAAGGGAATAATCCGTCATGGTTCAACAGAATTGAAGTGAGTAAGGTCATCGAAGTAGTCAAGAGGCTGACAGCTAAGGGGAATATGACAGCGGAAGACATCGGGATTATAACACCATATAGGCAACAAGTTCTCAAAATAAAACAGACACTTGAAAGTATTAATTTGCCGGAAATTAAGGTGGGAAGTGTTGAGCAGTTTCAGGGACAGGAGAGAGAAGTTATCATAATATCAACTGTTCGCTCTACAATCAGACATAATGAATTTGACAGAGTGCACTGTTTAGGATTCCTGAGCAATCATCGAAGATTTAATGTGGCTATTACCCGTGCCATATCCCTGCTGGTTATTATTGGGAACCCGCACATAATCTCCAAGGACTACTATTGGCACAAACTCTTGTGGCATTGCGTGGATAATTCATCTTATCTGGGCTGTTCTCTTCCTGAAAGACTGGAGATTGATGAGGACTCTGGCTTCAGCAATTTTCAAGAAAACTCATTACCCTCTGAAGGTGTGGAAGTGGAAAACTCATTACCCTCTGAAGGAGTGGAATGGGGTCAAGATTCCTCACAGCCACAGTTGCCTATACCTATACCCGGTACAGATGAAGCTGAATGGTCTGATGGTTGGAAATAA 2793 0.4117 MTVLVPEVRLNVVFVCITFVDRLLHFICLXLKLKLLYTKFSMSTIGYNSDEERSVIGEKAEIGFLDFEEEKSVCSYTPNEEDPIVISFPFPLVNGQPQSVVIGVTAVDLITIKNTTDEPVELWSVHILASNPEDCFTLSLMEPPSENSNADSGRGFLESFSLEDRMLQPGEILKVWLSCKTKDMGLHSTVVYFDAGDASIERVVFLLVEDKLSQSLASKKPYSKGRKKDKLVVDTLVAGSRPARKGNRAYKNWLPRYEIPRDMRELLESKQIPDVIVGGLTRKSYVSYFKTLVMMEEIQLEEDMRTYDMECVTMRKRANQFLSLEVPGLAERRPSLVHGDFIFAKLASEKDDPTIPAYQGFVHRVEADEVFLKFDAQFHLYHKDKDLYNVHFTYNRINIRRLHQAVEAAEKLGREFLSPHETSRSRLIKTADLVPITGNLNEEQMFAIKKILGCKGAPPYVIHGPPGTGKTKTIVEAILQLYKNRRNACILVCAPSNSAADYILEKLLGQKAVEFQDDEIFRLNASTRPYEELKPEVLRFCSFDEFVFKCPPVSVLMHYKIIISTYMSACLLYSEDVIRGHFSHIFLDEAGQASEPESMIPISHLCKRETVVVLAGDPMQLGPVIYSKEADDYGLGKSYLERLFECELYSNGDENYVTKLVRNYRCHPQILHLPSKLFYEGELIACKDDTSFSMISEDFLPNKEFPVLFFGIQGCDEREGNNPSWFNRIEVSKVIEVVKRLTAKGNMTAEDIGIITPYRQQVLKIKQTLESINLPEIKVGSVEQFQGQEREVIIISTVRSTIRHNEFDRVHCLGFLSNHRRFNVAITRAISLLVIIGNPHIISKDYYWHKLLWHCVDNSSYLGCSLPERLEIDEDSGFSNFQENSLPSEGVEVENSLPSEGVEWGQDSSQPQLPIPIPGTDEAEWSDGWK 930
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa08g0564 930 CDD SF1_C_Upf1 666 855 IPR047187 -
Bisa08g0564 930 FunFam Probable RNA helicase SDE3 389 534 - -
Bisa08g0564 930 Gene3D - 665 867 IPR027417 -
Bisa08g0564 930 Gene3D - 358 650 IPR027417 -
Bisa08g0564 930 Pfam AAA domain 555 628 IPR041677 GO:0004386
Bisa08g0564 930 Pfam AAA domain 439 529 IPR041677 GO:0004386
Bisa08g0564 930 CDD DEXXQc_Helz-like 440 665 IPR026122 GO:0003723|GO:0032574
Bisa08g0564 930 PANTHER CANCER/TESTIS ANTIGEN 55 163 424 - -
Bisa08g0564 930 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 437 851 IPR027417 -
Bisa08g0564 930 MobiDBLite consensus disorder prediction 901 915 - -
Bisa08g0564 930 Pfam AAA domain 636 839 IPR041679 -
Bisa08g0564 930 MobiDBLite consensus disorder prediction 880 930 - -
Bisa08g0564 930 FunFam Probable RNA helicase SDE3 665 864 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa08g0564 Bisa-ChrBisa08 9394193 9399549 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa08g0564 439 596 Core DNA Replication Machinery Family AT1G08840 33.333 6.67e-09 58.2