Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa08g0535 ATGGAACCGGGGATGAGATCAGCTGGCCCTTCTGGGGTTTTGGTGAAGAACAGGAACTCCTCAGGTTGTTTAATTGTTAGAAAGAAAGGAGATGCGTTCCCTGGTGGGGTTGGTTCTTCTCGCTCCCGGAAGCTGTATGATACAACAAAGGTGAGGAAAAGACAGATTATGGCCTCAAGTGATTCAGAATCAAGCGATGAATTACTGATGCCTCCTAGCAGAAGGGTGGGTCCTGAGACTGTTCGAGTCTGCAATGGTTTGACTGCATTTGAGCGGGGCATGGTTGGAGGGAGTGAATTTGGTAGAAAGAGGGATAGAATGGCCCAAATTAGACATAATGAGGATAGCCTTATTGATAAAAATGGTTTTGAGGAGAGGGAAAGAAAACGGAATAAGTTGGATATCTATGATTTTGATGAATATGACAGTGTACATGTGGAAAAGATGCAAAGGAGGCATTTTGATGATAATGGAGTTGGTTTTGGTGGAGGAAGGTATATGGGATCAGTGCATGCAGCTAGAAGTGGCATTGAAAGGGAATTTGATACAGGGCCAAGCAGACCAATTCTTGAAAAGAGAAAAAACTCCTATTATGACAGGGCTAGTGGCCCGTACATGGGAAGCAGTTTAGATGACAACAGGTTTAAGACGGACAGGGATGGAGCTCAACTGCCTCTACCCTTGTTGAGGGAGAAGCTTGTTGGCAATGCAGAGGAATCCATTAGAGTACAGGGGAAAAATGGTGTTTTGAAAGTGATGGTCAATAAGAAGAAGGTAGGCGGGCCATTAGAACACTATAATAACCGCAAACCTGTGGAAAGCCAACAGATTTTGAGGAGCGAGGGCAGTGCTAAGAGAAATGTTGTTCCGATCCATCCTTCATCATACTCAGAAACCACACTTGCTGAGAAATCAGATTTAGTTGTTAGGCCAGATAAAAAGAAGATAATATCAAGAAAACTGCTGTCAAGTAAAGACAGTAAGGGTGATGAATGGGATTCAGAGAACAGTGATGCATCATTGAACCTGGGACTAAAAAATACTGAAGGTCGCAAGTCTGTGAAGAGGGTGAGTTCTGGGGATGAACAGACTCCTTTGCATGAGAAGCTTCCAACTACAAGAACAAAAGAAGGAAAAGTCAGGCGTGGTAGTGGCACAGAGAAGCAGAAACTGCGAGAAAAAATAAGGGAGATGTTGCTGAGTGCAGGTTGGACTATAGATTATCGGCCCCGAAGGAATAGAGACTATCTAGATGCAGTTTATATTAATCCAGGAGGCACAGCCTATTGGTCGATCATCAAGGCTTATGATGCACTTCAAAAGCAATTGAATGAAGATAATAAGGAGGTGAAACCCAGAGCGGATGGATCTTCCTTTGCTCTTATCTCAGATGAGGTGCTCAGTCAATTAACAAGGAAAACTCGGAAGAAGATGGAGAAAGAATTGAAGAAGAAGCAAAGAAAGTGTAGCGAGAGTGATAGTGAAAAGGAACCTCCCATTAAAAAATCTGCTGGCAACAAGCATGCCTTTAACAGCTTTGATAGTGACAGCAATGAAGAGAAATTAAGCTCCTTTATAAAGCAGGGAAATAAGTCAATGAAAAATAAGATGACTGAAAATGCTGTTTCTGTTGCTAGTTCTAAATCTCAGAACCCCACCCATCAATCAGAAGAGGGCTCAGAAAAACCATTCTCTGGACGTGATCCCAACCGCCTACATGGAAGGAAAAGTAGAAAACATGGTCGATGTACTTTGTTAGTTCGTAGTTCTAACAAGGGATTGAATTCAGAATCTGATGGCTTTGTTCCATTTACGGGAAAACGGACTGTGCTTTCTTGGTTGATTGACTCTGGGACAGTGCAGTTAAGCCAAAAGGTTCAGTATCGTAAGAGAAAGCGAGTAATGCTGGAAGGATGGATAACAAGAGATGGCATTCACTGTGGTTGCTGTAGTAAAATCCTCACAGTTTCAAAGTTTGAGATTCATGCAGGAAGCAAATTGCGCCAGCCATTTCAAAACATATATTTGGACACTGGAGTTTCTCTTCTACATTGCCAGATAGATGCATGGAATAGACAAGAGAATTCTGGAAAAATTGCCTTCCACTCAGTAGATATTGATGGTGATGATCCAAATGATGATACTTGTGGTATTTGTGGAGATGGTGGGGATTTAATCTGTTGTGATGGTTGCCCATCAACCTTTCATCAGAACTGCCTGGATATACAGATGCTTCCCCCTGGAGAATGGCATTGCCCTAATTGCACCTGCAAATTTTGTGGAATAGCCAGTGGAACTATTAAAAAAGGAGATGATGCAACTGTCTATGACCTGCAAACTTGCAAGTTATGCGAGAAAAAATACCATGAATCTTGCGTGAAGGAGATGGATGCGCTTCCTGATAATGGCAGTATTTCATGCCCTACTTTTTGTGGAAAAGAGTGCAAAGAGCTTTTTGAGCACCTGAAGAAGTACCTTGGTGCCAAGCATGAACTAGAAGCAGGCTTTTCATGGTCTCTTATTCATAGAACAGATGAAGAGTCTGAGGCAGATACTAGAGGGATTTCTCAAAGGGTTGAATGCAACTCCAAGTTAGCTGTTGCACTGACTGTGATGGATGAGTGTTTTTTACCCATTGTTGACCGGAGGAGTGGGATCAGTTTAATTCACAATGCTCTATATAATAGTGGGTCAAACTTCAGTCGGCTGAACTACAGTGGTTTTTACACTGCTGTTTTGGAAAGGGGCGATGATATAATTTCTGCAGCATCTATTAGGTTCCATGGGACGAAGTTAGCAGAAATGCCATTCATTGGAACTCGCCATATATATAGGCGTCAGGGGATGTGTCGCCGCCTTTTTTCAGCCATTGAATCGGCTCTCTGCTCTCTAAAGGTTGAGAAACTGGTTATTCCTGCAATTTCTGAACTCGTGCATACATGGACAACAATTTTTGGCTTCACACAACTCAAGGAATCACTCAGGCAAGATATGAAGTCATTAAATATGTTGGTCTTCCCTGGTATAGATATGTTACAGAAGGTGCTTGTGAAGCAAGAAAAACTTGAGGGGAAAACAACCACCGCAGGTGCTGAGCAAATGGAAAAGCAAGATGAGGCTTCTATCAAGCCCAATACGTCAAATAGACCAGATATGGATTCCTCAGCTCAGCAAGATCCTCATGGAAGTGATGATGCTGGTTCGAATGCTGCCAATGAGACAACTGATGAATGCAGTGATGCTTCCCAAGAACTTAATAATCAAGCTTTGGCCGACAGGATTGTATGTTCCAAGTCTCACTCTGGTGATAGGTTGACTGAATCGGCCTCAGATAAATGTGCTTCTCCCTCTAGTACTAGTCATGGTGCTTTGGAGATTGAAAATAAAGTGGTTTCGGCATATCCTGTTAAAGAAAATTTGCATCCCTCTGACACTTATGCTGTGACTAGTCGTCCATTAGATGTTCCTGGTTCCCTTGAAAATCCAGCTTCGGTTCGGGGAACTGCTTGTTCTGACTCTGATTCAGCAGAAAATCTGGTAGAACCTGTTTCTGACTGGAAATGTCACTCTCCCACTACTATGAATTGTAGTTCATCGGAGTTTGAGAGTATTCCAGTCTCTGACTCTCATGTGGTTGATAATGCTCTGTCTTCTAAAGAGGTTGATATGATTGATGCCCATGAGGTTGTTGAAGCTGTTCCTTCGGAGGGGTTGTCTGGAGAGAATATTGCCAAGGGGATCAATGAAAATGGAGGTGTTTCCGGTTCTATTCTCAATCGTGCTGATGCAAGTTCATTGCAAATTAGATCTAATGTGAATGTTGAAACTGGATATGAAGGAGAAAGAAATGTATACATGGGCACAAAAGTTGCTTCGAATGTTTCAAATTCTGATTCTGATGAAAGCGGCCTTAATGCATCCACTGATTGCTCTGAGACTGATTCAGAATAA 3951 0.4242 MEPGMRSAGPSGVLVKNRNSSGCLIVRKKGDAFPGGVGSSRSRKLYDTTKVRKRQIMASSDSESSDELLMPPSRRVGPETVRVCNGLTAFERGMVGGSEFGRKRDRMAQIRHNEDSLIDKNGFEERERKRNKLDIYDFDEYDSVHVEKMQRRHFDDNGVGFGGGRYMGSVHAARSGIEREFDTGPSRPILEKRKNSYYDRASGPYMGSSLDDNRFKTDRDGAQLPLPLLREKLVGNAEESIRVQGKNGVLKVMVNKKKVGGPLEHYNNRKPVESQQILRSEGSAKRNVVPIHPSSYSETTLAEKSDLVVRPDKKKIISRKLLSSKDSKGDEWDSENSDASLNLGLKNTEGRKSVKRVSSGDEQTPLHEKLPTTRTKEGKVRRGSGTEKQKLREKIREMLLSAGWTIDYRPRRNRDYLDAVYINPGGTAYWSIIKAYDALQKQLNEDNKEVKPRADGSSFALISDEVLSQLTRKTRKKMEKELKKKQRKCSESDSEKEPPIKKSAGNKHAFNSFDSDSNEEKLSSFIKQGNKSMKNKMTENAVSVASSKSQNPTHQSEEGSEKPFSGRDPNRLHGRKSRKHGRCTLLVRSSNKGLNSESDGFVPFTGKRTVLSWLIDSGTVQLSQKVQYRKRKRVMLEGWITRDGIHCGCCSKILTVSKFEIHAGSKLRQPFQNIYLDTGVSLLHCQIDAWNRQENSGKIAFHSVDIDGDDPNDDTCGICGDGGDLICCDGCPSTFHQNCLDIQMLPPGEWHCPNCTCKFCGIASGTIKKGDDATVYDLQTCKLCEKKYHESCVKEMDALPDNGSISCPTFCGKECKELFEHLKKYLGAKHELEAGFSWSLIHRTDEESEADTRGISQRVECNSKLAVALTVMDECFLPIVDRRSGISLIHNALYNSGSNFSRLNYSGFYTAVLERGDDIISAASIRFHGTKLAEMPFIGTRHIYRRQGMCRRLFSAIESALCSLKVEKLVIPAISELVHTWTTIFGFTQLKESLRQDMKSLNMLVFPGIDMLQKVLVKQEKLEGKTTTAGAEQMEKQDEASIKPNTSNRPDMDSSAQQDPHGSDDAGSNAANETTDECSDASQELNNQALADRIVCSKSHSGDRLTESASDKCASPSSTSHGALEIENKVVSAYPVKENLHPSDTYAVTSRPLDVPGSLENPASVRGTACSDSDSAENLVEPVSDWKCHSPTTMNCSSSEFESIPVSDSHVVDNALSSKEVDMIDAHEVVEAVPSEGLSGENIAKGINENGGVSGSILNRADASSLQIRSNVNVETGYEGERNVYMGTKVASNVSNSDSDESGLNASTDCSETDSE 1316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa08g0535 1316 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 704 770 IPR013083 -
Bisa08g0535 1316 MobiDBLite consensus disorder prediction 484 503 - -
Bisa08g0535 1316 ProSiteProfiles Zinc finger PHD-type profile. 713 758 IPR019787 -
Bisa08g0535 1316 MobiDBLite consensus disorder prediction 1289 1316 - -
Bisa08g0535 1316 SUPERFAMILY FYVE/PHD zinc finger 705 761 IPR011011 -
Bisa08g0535 1316 MobiDBLite consensus disorder prediction 325 389 - -
Bisa08g0535 1316 Pfam Tify domain binding domain 638 688 IPR032308 -
Bisa08g0535 1316 SMART PHD_3 757 811 IPR001965 -
Bisa08g0535 1316 SMART PHD_3 715 756 IPR001965 -
Bisa08g0535 1316 MobiDBLite consensus disorder prediction 474 516 - -
Bisa08g0535 1316 Pfam PHD-finger 716 758 IPR019787 -
Bisa08g0535 1316 MobiDBLite consensus disorder prediction 54 77 - -
Bisa08g0535 1316 Coils Coil 468 495 - -
Bisa08g0535 1316 MobiDBLite consensus disorder prediction 538 559 - -
Bisa08g0535 1316 PANTHER PHD FINGER PROTEIN 12 373 1113 IPR042163 GO:0003714|GO:0045892
Bisa08g0535 1316 CDD PHD2_CHD_II 716 755 - -
Bisa08g0535 1316 ProSitePatterns Zinc finger PHD-type signature. 716 755 IPR019786 -
Bisa08g0535 1316 MobiDBLite consensus disorder prediction 1030 1081 - -
Bisa08g0535 1316 MobiDBLite consensus disorder prediction 538 582 - -
Bisa08g0535 1316 MobiDBLite consensus disorder prediction 1147 1176 - -
Bisa08g0535 1316 MobiDBLite consensus disorder prediction 1026 1081 - -
Bisa08g0535 1316 MobiDBLite consensus disorder prediction 349 389 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa08g0535 Bisa-ChrBisa08 9015549 9022530 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa08g0535 1 1060 PHD Transcription Factor Family AT4G14920 49.676 0.0 946
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Bisa08g0535 TDBD 3e-20 No_clan