Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa08g0527 ATGGCAGAACCTGCATATACCGTGGCATCTGACAGCGAAACCACTGGGGAGGAAAGGTCATCTTCCACTTTTCCAGAAATTGCTATAGGGATTGATATTGGCACATCACAATGTAGTGTTGCTGTGTGGAATGGATCACAAGTGGAGCTTCTGAAGAACACAAGAAACCAGAAGATCATGAGATCATACGTGACTTTCAAAGATGACACCCCTTCTGGTGGAGTAAGCAGTCAACTCTCCCACGAGCACGAGTTGTTGTCTGGAGCTACAATCTTCAACATGAAACGCTTGATTGGCAGAGATGATACTGACCCAGTTGTCCACTCAAGTAAAAATCTCCCATTTCTCGTGCAGACCTTGGATATTGGTGTTCGCCCATTTATTGCAGCATTGGTGAACAATATGTGGAGATCCACCACTCCGGAAGAAGTTCTGGCAATATTTCTGGTGGAACTACGACTGATGGCTGAAGCTCAGCTGAGGCGACCAATAAGAAACGTAGTTCTTACAATTCCCATTTCATTTAGTCGATTCCAGCTGACTCGGATAGAACGAGCTTGTGCTATGGCCGGCCTTCATGTTCTCAGGCTCATGCCTGAACCTACAGCTGTGGCTTTGTTATATGGACAGCAACAGCAGCAGACTTCTCACGAGACTATGGGCAGTGGAAGCGAAAAAATCGCTCTAATTTTCAACATGGGTGCTGGCTATTGTGATGTTGCTGTGACTGCTACAGCTGGAGGAGTTTCACAGATAAAAGCTCTGGCAGGAAGCACCATTGGAGGAGAGGACTTGCTTCAGAATATGATGCTTTATCTGTTACCAGAATCTGAAAATCTATTCAAGAACCATGGAGTCAAAGAAATCAAATCCATGGGCTTGCTCCGAAACGCAACCCAGGATGCCATTCACCGGCTTTCCTCTCAGACCAGTGTCCAGGTCAATGTAGACTTGGGAGATGGTTTGAAGATAAACAAGGTTGTGAACCGGAACGAGTTCGAGGAAGTGAACAGGAAGGTGTTTGAGAAGTGTGAAAGCCTCATTATCCAGTGTCTGCAAGATGCAAAGGTGGAGGTTGAGGACGTGAACGACGTGATAGTTGTCGGTGGATGTTCGTACATTCCGAAGGTTGAGAATCTTGTCACAAGCATATTCAAAGGAAAGGAACTTTATAAAGGGATGAATCCTTTGGAAGCTGCAGTTTGTGGTGCAGCAGTAGAAGGAGCTGTGGCTTCAGGTATTAACGATCCCTTTGGAAATTTGGACTTGTTAACGATTCAGGCCACACCTCTAGCTATAGGGATACGAGCTGATGGAAACAACTTTGTTCCTGTGATACCAAGAAATACCACAATGCCAGCAAGGAAGGACCTGGTTTTCACAACTGTTCATGATAATCAAACTGAGGCTTTGATCATTGTGTATGAAGGTGAGGGAAAGAAGGTTGAAGAGAATCACTTGTTGGGATACTTCAAGATAGTGGGAATTCCTGAAGCTCCCAAAGGAGTTCCAGAGATAAATGTGTGCATGGACATAGATGCTGCAAACGTGCTGAGAGTTTTAGCCGGTGTTGTGATGCCAGGGTCTCGGCAGCCGGCGGTTCCGGTCATGGAAGTGAGGATGCCGACAGTTGATGATGGCCATGGTTGGTGCGCTGAGGCCTTAAATAGAACTTACGGTTCTACACTGGACTTGGTTACTGTCCAGAAGAAGGGATAA 1719 0.4602 MAEPAYTVASDSETTGEERSSSTFPEIAIGIDIGTSQCSVAVWNGSQVELLKNTRNQKIMRSYVTFKDDTPSGGVSSQLSHEHELLSGATIFNMKRLIGRDDTDPVVHSSKNLPFLVQTLDIGVRPFIAALVNNMWRSTTPEEVLAIFLVELRLMAEAQLRRPIRNVVLTIPISFSRFQLTRIERACAMAGLHVLRLMPEPTAVALLYGQQQQQTSHETMGSGSEKIALIFNMGAGYCDVAVTATAGGVSQIKALAGSTIGGEDLLQNMMLYLLPESENLFKNHGVKEIKSMGLLRNATQDAIHRLSSQTSVQVNVDLGDGLKINKVVNRNEFEEVNRKVFEKCESLIIQCLQDAKVEVEDVNDVIVVGGCSYIPKVENLVTSIFKGKELYKGMNPLEAAVCGAAVEGAVASGINDPFGNLDLLTIQATPLAIGIRADGNNFVPVIPRNTTMPARKDLVFTTVHDNQTEALIIVYEGEGKKVEENHLLGYFKIVGIPEAPKGVPEINVCMDIDAANVLRVLAGVVMPGSRQPAVPVMEVRMPTVDDGHGWCAEALNRTYGSTLDLVTVQKKG 572
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa08g0527 572 Gene3D - 213 391 - -
Bisa08g0527 572 SUPERFAMILY Actin-like ATPase domain 27 211 IPR043129 -
Bisa08g0527 572 SUPERFAMILY Actin-like ATPase domain 225 412 IPR043129 -
Bisa08g0527 572 Gene3D Actin; Chain A, domain 4 262 343 - -
Bisa08g0527 572 Gene3D - 29 409 - -
Bisa08g0527 572 Pfam Hsp70 protein 28 523 IPR013126 GO:0005524|GO:0140662
Bisa08g0527 572 FunFam Heat shock 70 kDa protein 8 417 532 - -
Bisa08g0527 572 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 419 535 IPR029047 -
Bisa08g0527 572 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 424 530 IPR029047 -
Bisa08g0527 572 MobiDBLite consensus disorder prediction 1 21 - -
Bisa08g0527 572 PRINTS 70kDa heat shock protein signature 55 67 - -
Bisa08g0527 572 PRINTS 70kDa heat shock protein signature 167 187 - -
Bisa08g0527 572 PRINTS 70kDa heat shock protein signature 503 519 - -
Bisa08g0527 572 PRINTS 70kDa heat shock protein signature 394 414 - -
Bisa08g0527 572 PRINTS 70kDa heat shock protein signature 362 378 - -
Bisa08g0527 572 PRINTS 70kDa heat shock protein signature 422 441 - -
Bisa08g0527 572 PRINTS 70kDa heat shock protein signature 27 40 - -
Bisa08g0527 572 CDD HSP70_NBD 29 409 - -
Bisa08g0527 572 PANTHER HEAT SHOCK PROTEIN 70KDA 28 522 IPR013126 GO:0005524|GO:0140662
Bisa08g0527 572 Gene3D - 92 147 - -
Bisa08g0527 572 FunFam Heat shock 70 kDa protein 8 262 343 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa08g0527 Bisa-ChrBisa08 8883156 8884874 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa08g0527 22 522 Calmodulin-binding Proteins AT1G16030 38.492 7.48e-106 330