Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa08g0525 ATGGATGTTAATGTTACCTCTAAACTCCTTGTATCCCTTGTGACACTTTTTCTGTTCATTCTCTGCTCTAATGCTCAAAACAGCTCCAATCCCTTTGAATCGGGGTCAAGTATCGTTGCTGGTTCTAATTCATCTTGGAAATCACCCTCTGGTGATTTTGCTTTCGGGTTCTACCATCTTGACACTGGTGGCTACCTTGTTGGAATCTGGTTTGATCAGATTCCCCAGAAAACTCTGGTTTGGTCTGCAAACCGTGATGCTCCAGCTCAAAAGGGATCCACCGTCAATCTCACACTCGGTGGCCAGCTTTTACTCCTTCATGCACATGGGTCTCCATTTTCAATCTACAATGGAACAAAGCAAGCCTTGTCTGCTTCAATGCAGGATGATGGAAAATTGGTCCTCAGAGACTCACTCTCAGACACCATCTGGCAGAGCTTTGATTCACCAACAGATACCATTCTATTAGGCCAAAACTTGGTCATGAATCAGAGCATCTCCTCCAACGCCAACGGAACACAAGATTACTCAACTGGGAATTACAAGTTGTATGTCCAACCTGATGGCAACATTGTCCTCGCTGCTCTCAGGTTTCCAGGTCCTGCTTATTGGTGGTCGGATGGAACTGTCGGCAACACAGATGTGAGGATTGTCTTTAACAACGAGAGCGCTTTGCTCTACGCTGTCAATGGCACCCAAAACATATACCAAATGTCAACCCAAGTCCCGACCCCAATCGATGACTACTACCATCGAGCAACCATCAACGACCATGGAATCTTCGAACAGTTAATTTTCCGGAAAGAAAACGGAACAGACTGGGAAGTTATATGGCATGCTTCAATAGAACCCTGCAAAGTGACTGCAATTTGTGGGGCGAATGGCTTTTGCACTTCACCTGACAATAGAACAGTCAATTGTGGCTGCTTGCCTGGGTATACAGCTTTGGATCCTTATGTACCCTCCAAAGGCTGCTATCCCAATGTGGTGATGGATTTTTGTGCTGCAAATTCCGCTGCCTCAGACTTTTATGTGGCAGACATTACGAATGCTGATATACCCAACTCAGATTTTGCTAATATGCAATGGATATCTAATTCTGATTTAGATAGTTGCAGGAGAGAAGTGATGAATGATTGTTTCTGCATGGCTGCTGTTCTTCAAGGATCTAATTGTTTTAAGAAAAGGATGCCTCTTTTAAGTGGAAGAAAAAGCATCTTTTCCCTTAACAATAGTGTGGCCCTGGTTAAAGTTCCTCTTTTAAATGACTCTCCCTCTTGGGTTGTTCTACTTGTTTCCTTCTTGTCTTGTTCCCTACTTGCACTTGTATTTGCAGCATCTGCCATTTATCATAATCCAAAGTTTATCCGTTGGATACATAAGGAGGCACCTCCAAAGCCAAAGCCAGTAGACATCAATCTGAAGACATTTTCATTCCAAGAGTTGAGAGAAGCAACAATTGGGTTCAAGAACAAACTTGGCCAGGGAGCTTTTGGTACTGTCTATAGTGGGGTTTTAACCTTGGAGGGGGTACAGGTGGATGTTGCCGTGAAACAACTGGAAAAAGTAACGGAACAAGGTGTGATTCGTGAGAAGGAGTTTGTGACAGAAGTTCAAGTCATTGGATTATGGTGCCTAACTCCTAACCCAACGGATCGACCATTTATGAAGAAGGTGACACAGATGTTGGAGGGAACTATAGAAGTTGGTGTTCCGCCACTGGTCGATGGACAAATGCTATAG 1743 0.4395 MDVNVTSKLLVSLVTLFLFILCSNAQNSSNPFESGSSIVAGSNSSWKSPSGDFAFGFYHLDTGGYLVGIWFDQIPQKTLVWSANRDAPAQKGSTVNLTLGGQLLLLHAHGSPFSIYNGTKQALSASMQDDGKLVLRDSLSDTIWQSFDSPTDTILLGQNLVMNQSISSNANGTQDYSTGNYKLYVQPDGNIVLAALRFPGPAYWWSDGTVGNTDVRIVFNNESALLYAVNGTQNIYQMSTQVPTPIDDYYHRATINDHGIFEQLIFRKENGTDWEVIWHASIEPCKVTAICGANGFCTSPDNRTVNCGCLPGYTALDPYVPSKGCYPNVVMDFCAANSAASDFYVADITNADIPNSDFANMQWISNSDLDSCRREVMNDCFCMAAVLQGSNCFKKRMPLLSGRKSIFSLNNSVALVKVPLLNDSPSWVVLLVSFLSCSLLALVFAASAIYHNPKFIRWIHKEAPPKPKPVDINLKTFSFQELREATIGFKNKLGQGAFGTVYSGVLTLEGVQVDVAVKQLEKVTEQGVIREKEFVTEVQVIGLWCLTPNPTDRPFMKKVTQMLEGTIEVGVPPLVDGQML 580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa08g0525 580 Gene3D - 150 287 - -
Bisa08g0525 580 SMART blect_4 37 150 IPR001480 -
Bisa08g0525 580 ProSiteProfiles Protein kinase domain profile. 487 580 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa08g0525 580 ProSiteProfiles Bulb-type lectin domain profile. 23 148 IPR001480 -
Bisa08g0525 580 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 41 542 - -
Bisa08g0525 580 SUPERFAMILY alpha-D-mannose-specific plant lectins 66 207 IPR036426 -
Bisa08g0525 580 SUPERFAMILY Protein kinase-like (PK-like) 476 541 IPR011009 -
Bisa08g0525 580 Pfam S-locus glycoprotein domain 247 314 IPR000858 GO:0048544
Bisa08g0525 580 Pfam D-mannose binding lectin 78 169 IPR001480 -
Bisa08g0525 580 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase LECRK1 25 148 - -
Bisa08g0525 580 ProSitePatterns Protein kinases ATP-binding region signature. 493 518 IPR017441 GO:0005524
Bisa08g0525 580 Gene3D - 25 148 IPR036426 -
Bisa08g0525 580 Gene3D Phosphorylase Kinase; domain 1 462 545 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa08g0525 Bisa-ChrBisa08 8861275 8863626 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa08g0525 428 542 Receptor kinase-like Gene Family AT2G43700 34.188 8.70e-10 59.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Bisa08g0525 S_locus_glycop 1.6e-08 No_clan