Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa08g0503 ATGTTGGCTAGTCATTTTCAAAACGGCATCGAATCGGCGAAGCTCGTTTGGTCGCAGATTCCGCACTCGGAGGAATCGCTGTACGATGACACCGCTGGCCTCTTGAAGAAGAGCGATGGAAGCGGCGTTGAGAGTCTTGACTATGAAGTCATCGAGAATTATGCTTATCGGGAAGAACAGGCGAGAAGAGGGAAGCTGTATGTGGGCTACTTACTGGTGGTGAAATGGTTCTTTGCCTTGCTCATTGGCATCGGTACTGGACTTGCTGCCGTTTTCATCAATATTTCTGTTGAAAACTTTGCTGGATGGAAGTTCTCATTGACATTCAATATAATTCAAAAATCATATGTGGCTGGCTTCATTGTATATGTCCTTATCAACTTGGTTTTGGTCTATTCTTCTGTATATATCATCACACATTTTGCACCAGCCGCAGCTGGATCTGGTATACCTGAAATCAAGGGTTACTTGAATGGAATTGATGTTCATGGCATCCTTCTTTTGAGAACCTTGATTGGAAAGATATTTGGAAGCATTGGCTCAGTGGGAGGTGGCCTTGCTTTGGGCAAAGAAGGTCCTCTTGTTCATATTGGTGCATGTATTGCTTCCTTGCTAGGACAAGGTGGATCCACTAAATATCATCTAAGCTCGAGGTGGTTTCAAGTATTTAAAAGTGACCGAGACCGCCGTGATCTTGTAACGTGTGGCTGTGCAGCTGGAGTTGCGGCTGCATTTAGAGCTCCAGTTGGTGGGGTATTGTTTGCTTTGGAAGAGGTTACATCTTGGTGGAGGAGTCAACTGATGTGGCGTGTCTTCTTCACTTCTGCTATTGTGGCTGTTGTGGTGCGTACTGCAATGGGGTGGTGCAAGAGTGGAAAGTGTGGCCATTTTGGCTCAGGTGGATTCATCATATGGGATGTGTCAGATGGTCAAGAGGATTATTCCTTTGCAGAGTTATTACCAATGACTATTATTGGGGTTATTGGAGGTTTGCTAGGAGCCTTGTTTAACCAGCTTACTCGTAATATTACATCTTGGCGTCGAAATTATCTGCACAAAAAAGGGAGCCGTGTTAAGATTGTTGAAGCGTGCCTTATCTCAGTGTTAACATCAATTATTTCATTTGGCTTACCACTTCTCAGGAAATGTAGTCCATGTCCTGAATCTGATCCTGATTGTCCTCGACCTCCTGGGATGTATGGAAATTATGTTAACTTCTATTGTAGCAAAGAAAAGGAATACAATGATCTTGCAACTATTTTCTTCAATACGCAGGATGATGCCATTAGGAACTTGTTCAGTGCAAAAACAATACACGAATTCAGTGCTCAAAGTCTATTAACCTTTTTGGTTATGTTTTATACTCTAGGGGTGGTGACATTTGGTACTGCTGTTCCGGCCGGTCAATTTGTTCCTGGAATTATGATAGGATCGACATATGGACGTCTAGTTGGCATGTTTGTTGTAAAATACTACAGAAAGCTCCACATTGAAGAGGGGACGTATGCTCTTTTGGGAGCTGCATCTTTTCTTGGAGGTTCAATGCGGATGACAGTGTCTCTCTGTGTCATTATGGTTGAAATCACAAATAACTTGAAATTTTTGCCACTTATTATGCTTGTTCTTCTTATATCAAAGGCTGTTGGTGATGCTTTTAATGAGGGCCTCTATGAAGAGCAGGCACAACTGAGGAGCATTCCATTATTGGAATCAAGGCCCAAATATGTAATGCGGAATATGACAGCAAAGGAGGCCTGTGGGAGTGGAATGGTGGTCTCTTTCCCTCGAGTTGTTAAGGTTGCAGATGTTGTTTCTATTCTCCGGAGCAACAAACACAATGGTTTTCCTGTGATTGATCACACAAGAGGTGGAGAACCGCTTGTTAAAGGATTGGTACTTCGGAGTCATTTGTTGGTAATTCTGCAATCAAAGGTTGATTTCCAGCATAGTCCTTTACCCTCTGAACCCAGAGGTGGAGCCAGGATAAGGCATGACTCTGTTGAATTTGCGAAGCCTGTTTCTAGTAAAGGAATATGTATAGATGATATACATCTAAGTTCAGACGACTTGGAAATGTACATAGATCTTGCCCCCTTTTTGAATCCCTCACCATATATCGTGCCTGAAGATATGTCTTTGACAAAGGTATACAATCTTTTCCGCCAACTAGGATTGAGGCATTTATTTGTTGTTCCGCGTCCATCTCGTGTGCTTGGTTTGATAACCAGAAAAGATTTATTGATTGAGGACATAGAAAATGTGAATGCGCTAGAGCTCCAATCAACTAGAGTAAGAACCCACCAATGTGATAAAAAATTGATGACAAGGGAAGCAGATGTTGAGCGGCCTTTGTTAAATGGTCTTCTGGTTCAGGATCAGACTTCTGACTAG 2391 0.4258 MLASHFQNGIESAKLVWSQIPHSEESLYDDTAGLLKKSDGSGVESLDYEVIENYAYREEQARRGKLYVGYLLVVKWFFALLIGIGTGLAAVFINISVENFAGWKFSLTFNIIQKSYVAGFIVYVLINLVLVYSSVYIITHFAPAAAGSGIPEIKGYLNGIDVHGILLLRTLIGKIFGSIGSVGGGLALGKEGPLVHIGACIASLLGQGGSTKYHLSSRWFQVFKSDRDRRDLVTCGCAAGVAAAFRAPVGGVLFALEEVTSWWRSQLMWRVFFTSAIVAVVVRTAMGWCKSGKCGHFGSGGFIIWDVSDGQEDYSFAELLPMTIIGVIGGLLGALFNQLTRNITSWRRNYLHKKGSRVKIVEACLISVLTSIISFGLPLLRKCSPCPESDPDCPRPPGMYGNYVNFYCSKEKEYNDLATIFFNTQDDAIRNLFSAKTIHEFSAQSLLTFLVMFYTLGVVTFGTAVPAGQFVPGIMIGSTYGRLVGMFVVKYYRKLHIEEGTYALLGAASFLGGSMRMTVSLCVIMVEITNNLKFLPLIMLVLLISKAVGDAFNEGLYEEQAQLRSIPLLESRPKYVMRNMTAKEACGSGMVVSFPRVVKVADVVSILRSNKHNGFPVIDHTRGGEPLVKGLVLRSHLLVILQSKVDFQHSPLPSEPRGGARIRHDSVEFAKPVSSKGICIDDIHLSSDDLEMYIDLAPFLNPSPYIVPEDMSLTKVYNLFRQLGLRHLFVVPRPSRVLGLITRKDLLIEDIENVNALELQSTRVRTHQCDKKLMTREADVERPLLNGLLVQDQTSD 796
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa08g0503 796 SMART cbs_1 590 642 IPR000644 -
Bisa08g0503 796 SMART cbs_1 703 751 IPR000644 -
Bisa08g0503 796 PRINTS Plant CLC chloride channel signature 49 57 IPR002251 GO:0005247|GO:0006821|GO:0016020
Bisa08g0503 796 PRINTS Plant CLC chloride channel signature 259 267 IPR002251 GO:0005247|GO:0006821|GO:0016020
Bisa08g0503 796 PRINTS Plant CLC chloride channel signature 273 283 IPR002251 GO:0005247|GO:0006821|GO:0016020
Bisa08g0503 796 PRINTS Plant CLC chloride channel signature 417 433 IPR002251 GO:0005247|GO:0006821|GO:0016020
Bisa08g0503 796 PRINTS Plant CLC chloride channel signature 291 298 IPR002251 GO:0005247|GO:0006821|GO:0016020
Bisa08g0503 796 Gene3D Clc chloride channel 69 570 - -
Bisa08g0503 796 SUPERFAMILY CBS-domain pair 574 747 IPR046342 -
Bisa08g0503 796 CDD CBS_pair_voltage-gated_CLC_euk_bac 591 747 - -
Bisa08g0503 796 ProSiteProfiles CBS domain profile. 700 757 IPR000644 -
Bisa08g0503 796 Pfam Voltage gated chloride channel 133 549 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Bisa08g0503 796 FunFam Chloride channel protein 692 783 - -
Bisa08g0503 796 SUPERFAMILY Clc chloride channel 53 571 IPR014743 -
Bisa08g0503 796 PANTHER CHLORIDE CHANNEL PROTEIN CLC FAMILY MEMBER 36 753 - -
Bisa08g0503 796 CDD ClC_6_like 44 569 - -
Bisa08g0503 796 Pfam CBS domain 701 747 IPR000644 -
Bisa08g0503 796 Gene3D - 591 755 IPR046342 -
Bisa08g0503 796 FunFam Chloride channel ClC3 67 384 - -
Bisa08g0503 796 PRINTS Chloride channel signature 143 160 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Bisa08g0503 796 PRINTS Chloride channel signature 238 257 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Bisa08g0503 796 PRINTS Chloride channel signature 465 485 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Bisa08g0503 796 PRINTS Chloride channel signature 500 516 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Bisa08g0503 796 PRINTS Chloride channel signature 174 193 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Bisa08g0503 796 PRINTS Chloride channel signature 518 537 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Bisa08g0503 796 PRINTS Chloride channel signature 556 570 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa08g0503 Bisa-ChrBisa08 8424786 8434101 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa08g0503 1 768 Ion Channels AT5G26240 83.312 0.0 1236