Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa08g0481 ATGGCGATGGTAGAGAGCATTGTCAGTCTCTTTCTTCTCATTATGATTCTTCTCGTCGTCCTCGTCGTCTTCTTTGCCTGTAGACCATGGCGCTTCATTTTTTCGTCGCGTTCTCGCTCCCCCAACAAGGCTAATGATCTAGAGAGGCCTCTTGTCTTAGATGATGCAAATCAGAGCCATGAATTGCCTAGAGACTACGATCTTGAGGGTGCATCCTTCCCCAATGAAGGTCAATTTCACCCACAGCGACCGCTTGGACTTACTTGTAAGCAAAGGCTTCCTGCTGCTTCTCACCACATGCTTCAATGTGATAATTTGGTTGTAGATGTAATTTTTGATCCTCCAGAAGATGTTACTGTTGGTCAGACACTTAAGCTTTCCCCAGCCCAGTTAGCAGAATTTCAAAAGCATAGTAGAGATTTTGAAATTGACAGACTGCAAGACTTTGTACAAAGAGATATATTAGATCAAAGAAGTTGCCTCACTCTGGAGGTTATCACCGGTCCTTCTTGTGGACTTCGTTGTTCTGTACAATCAACAATCTCCTCAAAGCTACCACTGACCCTGGGAAGAGTTTCTCCAAGTGATTTGCTAATAAAAGATTCAGAAGTGTCAGGAAAGCATGCACTAATAAATTGGAATTTGGATAAAATGAAGTGGGAGTTGGTAGATATGGGTAGCCTAAATGGAACACTTTTGAATTCTCGACCAATCAACCATTCAGACAATGTAAGCAGGCAATGGAGTAATCCAACTGAGCTTGCTAATGGAGATATCATAACACTTGGAACAACATCAAGAGTAATTGTTCATATAACTTCTCAAAATAAGATTCACATTCCCTTTGGAGTAGGTATGGCATCAGATCCCATGTCTATGCGTCGGAAAAAGCTGCCCATGGAAGATGTTTGCTATTATCAATGGCCTCTACCTGGACTGGATCAGTTTGGACTGTTTGGCATTTGTGATGGGCATGGTGGAGATGGCGCTGCCAAATCTGCTAGCAAACTTTTCCCTAAGATAGTTGCAAATATATTATCGGATTCAGTTAGAAGAGAGAACGTTGTATCACTCTGTGATGCTTCAAACGTTCTAACAGATGCATTTTCACAAACAGAAGCTTGCATGAATCACCATTATGAGGGATGTACAGCAACAGTGCTTCTGGTGTGGGCTGATGGTGATGAAAATTTCTTTGCGCAATGTGCAAATGTTGGAGACTCTGCCTGTATTATGAATGTGGATGGGAAAGAAATTAAGATGACGGAAGATCATAAGATAACAAGTTATTCTGAGAGGCTCCGAATCAAAGAGATGGGCGAACCTTTGAAAGATGGGGAAACACGACTGTATGGTATAAATCTTGCAAGGATGCTTGGGGACAAATTCCTTAAACAGCAGGACTCGCGGTTCAGTTCAGAGCCTTATATAAGTGAAGTTGTGCATATTGATCAGGCAAGCAGGGCCTTTGCCATACTAGCAAGTGATGGGTTATGGGATGTCATCAGCATGAAGAAGGCCGCTCAGCTAGTGCTTCAGATGAGGGAGAAATACTCGGAAGATAGAGAGGCTTCAGCAGAAAAGATTGCAAATTTCTTGTTGATTGAGGCTAGAACACTCAGAACAAAGGATAATACTTCTGTAATTTTCTTAGATTTTGATAACTTCCCCAAAATTTCTTGTAAAGCTGAGTCTTAA 1698 0.4181 MAMVESIVSLFLLIMILLVVLVVFFACRPWRFIFSSRSRSPNKANDLERPLVLDDANQSHELPRDYDLEGASFPNEGQFHPQRPLGLTCKQRLPAASHHMLQCDNLVVDVIFDPPEDVTVGQTLKLSPAQLAEFQKHSRDFEIDRLQDFVQRDILDQRSCLTLEVITGPSCGLRCSVQSTISSKLPLTLGRVSPSDLLIKDSEVSGKHALINWNLDKMKWELVDMGSLNGTLLNSRPINHSDNVSRQWSNPTELANGDIITLGTTSRVIVHITSQNKIHIPFGVGMASDPMSMRRKKLPMEDVCYYQWPLPGLDQFGLFGICDGHGGDGAAKSASKLFPKIVANILSDSVRRENVVSLCDASNVLTDAFSQTEACMNHHYEGCTATVLLVWADGDENFFAQCANVGDSACIMNVDGKEIKMTEDHKITSYSERLRIKEMGEPLKDGETRLYGINLARMLGDKFLKQQDSRFSSEPYISEVVHIDQASRAFAILASDGLWDVISMKKAAQLVLQMREKYSEDREASAEKIANFLLIEARTLRTKDNTSVIFLDFDNFPKISCKAES 565
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa08g0481 565 SMART PP2C_4 277 551 IPR001932 -
Bisa08g0481 565 Pfam Protein phosphatase 2C 291 546 IPR001932 -
Bisa08g0481 565 Gene3D - 156 288 - -
Bisa08g0481 565 SMART FHA_2 186 238 IPR000253 GO:0005515
Bisa08g0481 565 FunFam Protein phosphatase 2C 70 156 290 - -
Bisa08g0481 565 SUPERFAMILY SMAD/FHA domain 159 271 IPR008984 GO:0005515
Bisa08g0481 565 ProSitePatterns PPM-type phosphatase domain signature. 318 326 IPR000222 GO:0043169
Bisa08g0481 565 PANTHER PROTEIN PHOSPHATASE 2C 258 550 IPR015655 GO:0004722|GO:0006470
Bisa08g0481 565 Pfam FHA domain 188 263 IPR000253 GO:0005515
Bisa08g0481 565 ProSiteProfiles Forkhead-associated (FHA) domain profile. 187 238 IPR000253 GO:0005515
Bisa08g0481 565 Gene3D - 289 564 IPR036457 -
Bisa08g0481 565 ProSiteProfiles PPM-type phosphatase domain profile. 283 553 IPR001932 -
Bisa08g0481 565 FunFam Protein phosphatase 2C 70 291 560 - -
Bisa08g0481 565 CDD FHA_PP2C70-like 161 271 - -
Bisa08g0481 565 SUPERFAMILY PP2C-like 284 557 IPR036457 -
Bisa08g0481 565 CDD PP2Cc 291 553 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa08g0481 Bisa-ChrBisa08 8120286 8130439 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa08g0481 1 554 PP2C-type Phosphatase Gene Family AT5G19280 58.983 0.0 653