Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa08g0457 ATGTCTCACATATCTGTGGAGAGGAACAGAAGAAGACAGATGAACGAACATCTCAAAGTTTTAAGGTCCATGACCCCATGTTTCTATATCAAAAGGGGAGACCAAGCATCTATAATAGAGGGAGTGATAGAGTTTATAAAGGAGTTACACCAAGTTCTTGAAGCCTTAGAATCGAAGAAAAGAAGGAAGAGTCTGAGCCCTAGCCCACGTGGCCCTATTACACCAACAACACTTCAAGTCGATAATCCCTTTGGGAATATTGGATCTACTGATCAATTATTCAAAAAGGAAGTAGGAGCAGCAATTAACTGCAACTCTTCAGTGGCAGATGTGGAAGTGAAAATCTCAGGATCCAATGTGATTGTGAGAGTGATTTCTCAGAGGATTCCTGGTCAAGTCAGCAGGATCATCGGTGTTTTAGAAGCCCTCTCTTTTCAAGTCCTTCATCTTAATATCAGTAGCATGGAGGATCTCGTTCTCTACCACTTTGTTGTTAAGATAGGGCTGGAATGTCAATTAAGTCTCGAGGAACTAGCAACGCAAGTGCAACAAAGCTTCTGCTCAGATGCTGTTACCACCACATAG 585 0.4205 MSHISVERNRRRQMNEHLKVLRSMTPCFYIKRGDQASIIEGVIEFIKELHQVLEALESKKRRKSLSPSPRGPITPTTLQVDNPFGNIGSTDQLFKKEVGAAINCNSSVADVEVKISGSNVIVRVISQRIPGQVSRIIGVLEALSFQVLHLNISSMEDLVLYHFVVKIGLECQLSLEELATQVQQSFCSDAVTTT 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa08g0457 194 FunFam Transcription factor MUTE 1 66 - -
Bisa08g0457 194 SUPERFAMILY ACT-like 118 182 IPR045865 -
Bisa08g0457 194 SMART finulus 4 55 IPR011598 GO:0046983
Bisa08g0457 194 Pfam Helix-loop-helix DNA-binding domain 2 49 IPR011598 GO:0046983
Bisa08g0457 194 Gene3D - 1 64 IPR036638 GO:0046983
Bisa08g0457 194 PANTHER TRANSCRIPTION FACTOR FAMA 1 186 IPR044283 GO:0003700|GO:0010052
Bisa08g0457 194 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 1 49 IPR011598 GO:0046983
Bisa08g0457 194 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 1 66 IPR036638 GO:0046983
Bisa08g0457 194 MobiDBLite consensus disorder prediction 60 79 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa08g0457 Bisa-ChrBisa08 7864474 7866073 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa08g0457 1 191 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G06120 66.500 6.89e-83 242
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Bisa08g0457 HLH 1.5e-08 No_clan