Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa08g0454 ATGGCTTCCATCCTCAGAGAATCGTCACTGTGCGTGACTTTCTCTTCACATGTGGCCACCAAGACCTTGTTACACGGCCTTCCCAAAGCTGTCAAGGGAATGGCAGGTCTTGGAAGGAGCAAGATCTCTGTCCCGACTCTGTTTTCCTCGGCTTTTAGATTCCCCAACAAGTTCGCCATTTGCTTGAGCCCTTCATCTTCTTCATCCTCCCAAGGGGTCATGTTTTTTGGTGATCCCCCTTATGTTCTTCTTCCTGGTATTGACGTTTCCAAGTCTCTTGTCTGTAGCCCACTCATCGAACACCCAGATAATTATACAGCAGCGCCTATTTTCCATGGGAGACTTTCTGCAGAATATTTCATTGGGGTGAAGTCTATAACGATCAAGGGAAAGAAAGTCCCAATAAAGTCGTCATTATTATCCTTTGGCATTGAGGGGGCGGGTGGGACAAAGATTAGTACTTTGAATCCTTACACAGTGATGGAGACCTCAATCTACAGAGCTGTCCTTGATGCATTTGGGAAAGAACTTCAACTTGCAGGTGTTCCTAGAGCAGAAGCAGTACCACCATTTGAGCTATGTTACGAGGGGAAGAGACTGAATAGGACAAGTTTTGGAGTTGAAGTGCCATTAATAGAGCTTGTGTTGCAGAAAAGCGATGTTGTATGGAGGATAAATGGAATGAACTCCATGGTTCGTGTGAGCAAGGAGGTGGGTTGTGTTGGATTTGTGGATGGAGGTTTGGAGCGGACTTCGATTGTGATTGGAGGGCATCAATCAGAAGACAATTTTCTGTTATTTGATTTGGATAATGCAAGGCTTGGTTTCAGCTCTTCCCTGTTGACTGTATTCTTATCAATTGCCATTCCAGATTTTGCAATTGGTCTTTTTCTTGGATCAGTTGGCTCTGCAACTAACAAAGATGCACTTAAAAACTTGAATGTTACTCATATTTTAACTGTGGCTAATACTCTGGAGCCCGCACATCCTAATGATTTTGTCTATAAAATTATAAATGTTGTTGACAGAGAAGACACCAACTTAAGGCAATACTTCAACGAGAGTTTTGATTTTATTGATGAAGCCAAAAGACTTGGTGGAGGGGTTTTGGTTCATTGCTTTGCTGGAAGATCCAGGAGTGTAACTATAGTGCTTGCATATCTGATGAAGACTCGTAGAATGAGCCTTTCTCAAGCTCTGCAGCATGTGAAGAGCAAAAGACCAGTGGCATGTCCCAATTCTGGTTTCTTTAGACAGCTGGAGGACTTCGAAAAATCTCTTCAAGTAGTAGCAAATTGA 1299 0.4303 MASILRESSLCVTFSSHVATKTLLHGLPKAVKGMAGLGRSKISVPTLFSSAFRFPNKFAICLSPSSSSSSQGVMFFGDPPYVLLPGIDVSKSLVCSPLIEHPDNYTAAPIFHGRLSAEYFIGVKSITIKGKKVPIKSSLLSFGIEGAGGTKISTLNPYTVMETSIYRAVLDAFGKELQLAGVPRAEAVPPFELCYEGKRLNRTSFGVEVPLIELVLQKSDVVWRINGMNSMVRVSKEVGCVGFVDGGLERTSIVIGGHQSEDNFLLFDLDNARLGFSSSLLTVFLSIAIPDFAIGLFLGSVGSATNKDALKNLNVTHILTVANTLEPAHPNDFVYKIINVVDREDTNLRQYFNESFDFIDEAKRLGGGVLVHCFAGRSRSVTIVLAYLMKTRRMSLSQALQHVKSKRPVACPNSGFFRQLEDFEKSLQVVAN 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa08g0454 432 CDD DSP 295 422 - -
Bisa08g0454 432 Gene3D Acid Proteases 79 288 IPR021109 -
Bisa08g0454 432 PANTHER DUAL SPECIFICITY PROTEIN PHOSPHATASE 294 427 - -
Bisa08g0454 432 FunFam Dual specificity phosphatase 12 291 432 - -
Bisa08g0454 432 SUPERFAMILY Acid proteases 17 281 IPR021109 -
Bisa08g0454 432 Gene3D Acid Proteases 4 77 IPR021109 -
Bisa08g0454 432 SMART ptp_7 333 432 IPR003595 -
Bisa08g0454 432 Gene3D Protein tyrosine phosphatase superfamily 293 432 IPR029021 -
Bisa08g0454 432 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 295 428 IPR029021 -
Bisa08g0454 432 ProSiteProfiles Peptidase family A1 domain profile. 1 277 IPR033121 -
Bisa08g0454 432 ProSiteProfiles Dual specificity protein phosphatase domain profile. 286 429 IPR020422 GO:0006470|GO:0008138
Bisa08g0454 432 Pfam Xylanase inhibitor N-terminal 21 78 IPR032861 -
Bisa08g0454 432 Pfam Dual specificity phosphatase, catalytic domain 296 425 IPR000340 GO:0008138|GO:0016311
Bisa08g0454 432 FunFam Basic 7S globulin 79 287 - -
Bisa08g0454 432 SMART dsp_5 295 426 IPR020422 GO:0006470|GO:0008138
Bisa08g0454 432 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 350 408 IPR000387 GO:0016311|GO:0016791
Bisa08g0454 432 Pfam Xylanase inhibitor C-terminal 118 277 IPR032799 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa08g0454 Bisa-ChrBisa08 7811719 7816508 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa08g0454 295 428 Protein tyrosine phosphatase (PTP) family AT3G06110 60.448 2.79e-52 171