Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa08g0453 ATGATATGGTCTGGGAAGATATTCTTAAACCTTAATATTAGATGCGATGTTATACCTAAGCTTCATAACTCGCTTTATTGCCAATTGAGAGCTAGTGCTAGTGCTAGTGCTACTGTTTTTGCAATTTGGAACATAAAGCTAAAGCTAAAGCTATACCGATCTCACCATCTTATTCACATCTCTAAATTTATCATGAGATTGTCAGATTCACATATAGTAGCTAGCTACCTATTGAATCAATTTGTACAATGGAAATTTAATATAGAAGCAATTTCAGTCACTCTTTTAGCTGGCATGGCTGTTCATAACAAATGGTGGAACATGTCTCACATATCTGTGGAGAGGAACAGAAGAAGACAGATGAACGAACATCTCAAAGTTTTAAGGTCCATGACCCCATGTTTCTATATCAAAAGGGGAGATCAAGCATCTATAATAGGGGGAGTGATAGAGTTCATAAAGGAGTTACACCAAGTTCTTGAAGCTTTAGAATCGAAGAAAAGAAGGAAGAGTCTGAGCCCTAGCCCACGTGGCCCTATTACACCAACAACACTTCAAGTCGATACTCCCTTTGGTAATATTGGATCTACTGATCAATTATTCAAAAAGGAAGCAGGAGCAGCAATTAGCTGCAACTCTTCAGTGGCAGATGTGGAAGTGAAAATCTCAGGATCCAATGTGATTGTGAGAGTGATTTCTCAGAGGATTCCTGGTCAAGTCTGCAGGATCATCGGTGTTTTAGAAGCCCTCTCTTTTCAAGTCCTTCATCTTAATATCAGTAGCATGGAGGATCTCGTTCTCTACCACTTTGTTGTTAAGATAGGGCTGGAATGTCAATTAAGTCTGGAGGAACTAGCAACGCAAGTGCAACAAAGCTTCTGCACAGATGCTGTTACCACTATTAGCTATTAG 912 0.3936 MIWSGKIFLNLNIRCDVIPKLHNSLYCQLRASASASATVFAIWNIKLKLKLYRSHHLIHISKFIMRLSDSHIVASYLLNQFVQWKFNIEAISVTLLAGMAVHNKWWNMSHISVERNRRRQMNEHLKVLRSMTPCFYIKRGDQASIIGGVIEFIKELHQVLEALESKKRRKSLSPSPRGPITPTTLQVDTPFGNIGSTDQLFKKEAGAAISCNSSVADVEVKISGSNVIVRVISQRIPGQVCRIIGVLEALSFQVLHLNISSMEDLVLYHFVVKIGLECQLSLEELATQVQQSFCTDAVTTISY 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa08g0453 303 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 105 156 IPR011598 GO:0046983
Bisa08g0453 303 SMART finulus 111 162 IPR011598 GO:0046983
Bisa08g0453 303 Pfam Helix-loop-helix DNA-binding domain 108 156 IPR011598 GO:0046983
Bisa08g0453 303 PANTHER TRANSCRIPTION FACTOR FAMA 107 293 IPR044283 GO:0003700|GO:0010052
Bisa08g0453 303 Gene3D - 106 171 IPR036638 GO:0046983
Bisa08g0453 303 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 108 172 IPR036638 GO:0046983
Bisa08g0453 303 CDD bHLH_AtFAMA_like 108 181 - -
Bisa08g0453 303 FunFam Transcription factor MUTE 108 173 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa08g0453 Bisa-ChrBisa08 7805161 7811505 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa08g0453 108 298 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G06120 66.500 1.11e-82 246
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Bisa08g0453 HLH 2.1e-07 No_clan