Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa08g0424 ATGATTCTAGAGCAAAACCCTGTAGGTACAAAACTGGCAATGAATAATGCCTGTGGAGAGGAGGAAAGAGAATTTGCCCATGAACCATACATAGGGTTAGAATTTGACTCAGCAGATGATGCACTTCAGTTTTACACATCATACGGAAAGCAAGTTGGATTTAAAGTTCGGATCGGTCAGTTGTATCGGTCCAGAACTGATGGCTCAGTTTCTTCTAGAAGATTCGTGTGCTCAAAGGAGGGATATCAGCTTAGTTCAAGAACAGGTTGTCCAGCATTTATAAGGGTACAAAAGCGTGATTCAGGGAAGTGGGTTGTTGATCATTTCCTGAAGGGCCACAATCATGAACTTGAACCTGAAGGTGACAGTGAAAGCTGCCCTCCTAATCTTCCACAGAAGGATGCTGCAGCTATAAAATCTTTTACTGATGTGTCCCGTCGGCAACGGAAAAAGGTGCTTGAAGAAGCTAAGGATGAGCGCTTTCGTGCCTTTGGCATAATTAATTTCAAGCGTTTGAGGAAAGGAGATGAAGGACAGTCCAGGGTTGAACCCTATGTGGGTCAAGAATTCAGTTCATCTAATGAAGCTTACCAATTCTATCATGCATATGCGGCGTATGCAGGTTTCAGAGTTCGTATTGGTCAATTGTTTCGTTCCAAGAATGATGGATTAATCACATCCCGCCGATTTGTGTGCTCAAAAGAAGGATTCCAGCACCCTTCAAGAGTTGGTTGTGGGGCTTACATGAGAATTAAGAGACAACCATCTGGAAAGTGGGTAGTGGACCGCCTTCATAAAGATCATAATCATAATTTTGATCTTGAAAAAGAGGGTGGGCAAAAAAGTCTACCTGCTGTAAATATTTTGACAGACGAAGTTGATACTGGATTGGTAAATGGTGACTTATTTAGGGTAGATAACTACCCTGCACCTAGAGGAGGTAGACAAAATCATATTAGAAGTGAATGGTACAGTGTGCTTTTTGGCTATTTTCAATCAAAACAAGCAGAAGATACAGGATTCTTTTACTCTGTAGAAGTTGATAATGGTAATTGCATGAGCATATTTTGGGCTGATGGCAGATCTAGATATTCATGCAGTCAGTTTGGTGATGTCCTTGTTTTGGATACAACATTTCGAAAAAGTGTCTATTTGGTGCCATTTGCTACTTTTGTTGGCATTAATCATCACAGGCAGCCTGTTCTTCTTGGATGTGCTCTAATTGCCGATGAATCAGAAGAGTCTTTCACTTGGTTGTTTCAAACATGGATGAGGGCAATGTGTGGCCGGCAGCCACTGTCTGTAATTGCTGATCAAGACATTGCAATCCAGAAGGCAATAGCAAAAGTCTTTCCTGGGACCCATCATCGTTTTTCATTGTGGCAAATTAAAGCAAAAGAACAAGAGAATGTGGGTTTGATGGGTAATAAATTTACATATGACTATGAAAGGTGCGTTTACCAAAGTCAGACAGTTGAAGAATTTGACACCACATGGAATGCTCTAATAAACAAATATGGATTAGAGGGCAATGGTTGGCTAAAGGAGATGTATGAGAAGCGCACATCTTGGGTTCCGTTATATTTGAAGGGCACCTTTTTTGCAGGCATTCACATGAATGAAAGTGTTGATTCATTCTTTGGCACACTTTTAAATGGCCAAACACCTCTCATGGAGTTCATTTCACGGTATGAAAGAGGTCTTGAGCGACGCCGTGAGGAAGAAAGAAAAGAAGATTTTAATACTTCCAACTTTCAACCATTTTTGCAAACAAAAGAACCAGCTGAAGAACAATGTAGAAGGCTTTACACTCTTACCATTTTCAAAATATTTCAAAAAGAGCTTCTACAATCCTACAGTTATCTTGGGTTTAAAATTTATGAAGAAGGGGTCCTCAGCAGATATTTGGTCCGTAGGTGCGGGAATGATCCTGAGAAGCACGTAGTTACCTTTAGTGCATCCAATGTTACTGTAAGCTGTAGCTGTCAGATGTTTGAATATGAAGGTATTCTTTGCAGACATGTTCTAAGGGTTTTCCAAATCTTGGAATTAAGAGAAGTTCCACCTCGGTACATCCTACACCGCTGGACCAGAAATGCTGAAAATGGTGTTTTTCCTGACGTAGAATCATGGAGTAGCCCTCAGGAACTCAGGAGTTTGATGCTATGGAGCCTAAGAGAAACTGCATGTAAATACATAGATGCCGGTGCATCATCCCTTGACAAGTACAAACTTGCATACGAGATCTTGCAAGAGGGTGGAAGAAAGCTATGTTGGCATAGGTGA 2286 0.4099 MILEQNPVGTKLAMNNACGEEEREFAHEPYIGLEFDSADDALQFYTSYGKQVGFKVRIGQLYRSRTDGSVSSRRFVCSKEGYQLSSRTGCPAFIRVQKRDSGKWVVDHFLKGHNHELEPEGDSESCPPNLPQKDAAAIKSFTDVSRRQRKKVLEEAKDERFRAFGIINFKRLRKGDEGQSRVEPYVGQEFSSSNEAYQFYHAYAAYAGFRVRIGQLFRSKNDGLITSRRFVCSKEGFQHPSRVGCGAYMRIKRQPSGKWVVDRLHKDHNHNFDLEKEGGQKSLPAVNILTDEVDTGLVNGDLFRVDNYPAPRGGRQNHIRSEWYSVLFGYFQSKQAEDTGFFYSVEVDNGNCMSIFWADGRSRYSCSQFGDVLVLDTTFRKSVYLVPFATFVGINHHRQPVLLGCALIADESEESFTWLFQTWMRAMCGRQPLSVIADQDIAIQKAIAKVFPGTHHRFSLWQIKAKEQENVGLMGNKFTYDYERCVYQSQTVEEFDTTWNALINKYGLEGNGWLKEMYEKRTSWVPLYLKGTFFAGIHMNESVDSFFGTLLNGQTPLMEFISRYERGLERRREEERKEDFNTSNFQPFLQTKEPAEEQCRRLYTLTIFKIFQKELLQSYSYLGFKIYEEGVLSRYLVRRCGNDPEKHVVTFSASNVTVSCSCQMFEYEGILCRHVLRVFQILELREVPPRYILHRWTRNAENGVFPDVESWSSPQELRSLMLWSLRETACKYIDAGASSLDKYKLAYEILQEGGRKLCWHR 761
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa08g0424 761 Pfam SWIM zinc finger 653 680 IPR007527 GO:0008270
Bisa08g0424 761 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 20 130 IPR031052 GO:0006355
Bisa08g0424 761 SMART 26again6 658 685 IPR006564 GO:0008270
Bisa08g0424 761 Pfam FAR1 DNA-binding domain 43 118 IPR004330 -
Bisa08g0424 761 Pfam FAR1 DNA-binding domain 198 272 IPR004330 -
Bisa08g0424 761 Pfam MULE transposase domain 372 465 IPR018289 -
Bisa08g0424 761 ProSiteProfiles Zinc finger SWIM-type profile. 647 683 IPR007527 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa08g0424 Bisa-ChrBisa08 7245756 7248041 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Bisa08g0424 MULE 2.3e-25 CL0219