Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa08g0388 ATGGACGATGATCACCGATCTAAAGCTTCCTCACCGTTTCGTGTTGCAATGGTTGTTTTATTGATGTGTTCCGTTAATCTCGTATCATGCGTGCATGCATGCATGCATGCACATTGTAGCAAATGCTTAAGCTATAATCAGTTTCAGTTTTCAAGAACCATTAATTTGTCACGTTCTCTGTTATTTGCTGAGAAAGAAGATGATATTGGCAGTGCGGAATCCCCCAACGCAGAAAAAGAGGGCTCAATAACAAAGAAGACTGTTTCTATAAAAATGAGAAGAGTACGGACTGGGTTTTCTGATACCATTGACTTTGACGTGAAAGCTTTATTAGTCGACGAGGAAGCCGGTCTCGAGTGCTCTACTAGTGCTGGCATGCTTGAGGATTGTCCAAGAAGTGTAGCATCTGAAAGCTATTCCACCACTGCCAGCACTTCTGATTCAGAGTGTCAACCAGGTGAAGGACACGGACCCCATTGGCGTAATTTCCTTCGTTTTGTGAAAAAGGGACCCCAGCTTCGCTTCAATCATCCACCTAAAACTCTTCCCAAAACCACCAAAAGAACAGTTAAAAGAATCAAGGAGGACCTGATCCCTGCTATGAATTCTCCTTCTAAAAGATCATCTCTTGACCAAGAACTTTACTACTTTAAGCCTTCTTGGATAAATTTCAGTTATTCGCAGCTTGAAGCTGCCACCAACAACTTCAGCCATGAGTGTTTGATTGGGATGGGAGGTTATGCTGAGGTTTACAAGGGAAAAATGGAAGATGGTAAGTATGTTGCAATCAAACGGCTGACAAGAGGAAACCAAGAAGAAATGACTGCTGATTTCTTGTCTGAGCTTGGTATTATAGTGCATGTCGACCATCCCAATATTGCCAGATTGATTGGTTATGGTGTAGAGGGGGGAATGTTTCTTGTTCTTCAGTTGTCTCCACATGGCAGCTTATCAAGCATACTCTATGGACCTCGAGAGAAACTGGCTTGGAGCATCAGATTTAATATTGCTTTAGGGACTGCTGAGGGCCTTCAATATCTGCATGAGGATTGTCAAAGAAGGATCATACATAGAGATATAAAGGCTGCCAATATTTTGCTCTTGGATAATTACGAGCCTCAGGTGTCTGATTTTGGACTTGCAAAATGGTTACCTGACCAATGGACTCACCATACTGTTGACAAAATTGAAGGCACATTTGGCTACCTTCCTCCTGAATTCTTCATGCATGGTATAGTAGATGAAAAGACAGATGTCTTTGCTTATGGAGTGCTATTATTGGAGCTCATTACTGGACGACAAGCTTTGGATAGCTCTCAGAAAAGTCTGGTGATGTGGGCAAAACCTCTGCTATCTGTAGACAAGTTGGAAGAGATTGTTGATCCAGTCCTGGGTGATGCTTATGATGAAGAACAGATGAAAATTGTCGTCTTGACCGCTGCTTCATGTATAGATCAGAGTGCAGCACAGCGACCAGATATGAGCCAGGCAGGTTCTTTATATATGAAATATTTGGACAAGAATAATTTATTGGTGAAAGTAAGGAGTCTAAAAGGTGATGAAGGAAGCATTAAGTACATAATGGACCGCCAGAGGTCGAAGCTGCGAAGGACGTACTCGGTAGAGCTGTTTGATGCAGAAGAGTACAATTCAACCAAGTTGTTGAATGAAATGAATCGAAAAAGCTTGGAGGCGATGCTAGGCCTGAGCCGCAGCCCCAGTAACTCTTTCAAGGAAGAAAGCATTATTCAGAGCTAG 1758 0.4249 MDDDHRSKASSPFRVAMVVLLMCSVNLVSCVHACMHAHCSKCLSYNQFQFSRTINLSRSLLFAEKEDDIGSAESPNAEKEGSITKKTVSIKMRRVRTGFSDTIDFDVKALLVDEEAGLECSTSAGMLEDCPRSVASESYSTTASTSDSECQPGEGHGPHWRNFLRFVKKGPQLRFNHPPKTLPKTTKRTVKRIKEDLIPAMNSPSKRSSLDQELYYFKPSWINFSYSQLEAATNNFSHECLIGMGGYAEVYKGKMEDGKYVAIKRLTRGNQEEMTADFLSELGIIVHVDHPNIARLIGYGVEGGMFLVLQLSPHGSLSSILYGPREKLAWSIRFNIALGTAEGLQYLHEDCQRRIIHRDIKAANILLLDNYEPQVSDFGLAKWLPDQWTHHTVDKIEGTFGYLPPEFFMHGIVDEKTDVFAYGVLLLELITGRQALDSSQKSLVMWAKPLLSVDKLEEIVDPVLGDAYDEEQMKIVVLTAASCIDQSAAQRPDMSQAGSLYMKYLDKNNLLVKVRSLKGDEGSIKYIMDRQRSKLRRTYSVELFDAEEYNSTKLLNEMNRKSLEAMLGLSRSPSNSFKEESIIQS 585
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa08g0388 585 SUPERFAMILY Protein kinase-like (PK-like) 215 497 IPR011009 -
Bisa08g0388 585 SMART serkin_6 236 505 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa08g0388 585 Gene3D Transferase(Phosphotransferase) domain 1 313 517 - -
Bisa08g0388 585 FunFam receptor-like cytosolic serine/threonine-protein kinase RBK2 313 515 - -
Bisa08g0388 585 Pfam Protein tyrosine and serine/threonine kinase 241 445 IPR001245 GO:0004672|GO:0006468
Bisa08g0388 585 ProSitePatterns Serine/Threonine protein kinases active-site signature. 355 367 IPR008271 GO:0004672|GO:0006468
Bisa08g0388 585 PANTHER OS08G0249100 PROTEIN 107 549 IPR046958 -
Bisa08g0388 585 FunFam Receptor-like cytosolic serine/threonine-protein kinase RBK1 212 311 - -
Bisa08g0388 585 ProSitePatterns Protein kinases ATP-binding region signature. 242 264 IPR017441 GO:0005524
Bisa08g0388 585 ProSiteProfiles Protein kinase domain profile. 236 505 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa08g0388 585 Gene3D Phosphorylase Kinase; domain 1 198 310 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa08g0388 Bisa-ChrBisa08 6717863 6721724 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa08g0388 208 551 Trihelix Transcription Factor Family AT5G38560 38.873 4.93e-68 231
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Bisa08g0388 PK_Tyr_Ser-Thr 6.7e-39 CL0016