Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa08g0382 ATGGAAACCCAAGCTGTTCCCAGAACTACTCCTATATCACCCGAACAACCTCCATCATCGTTGCAGCCGCCGGAACCGGTTGTTCTTGGCCCCCGACCGGGGGATTCGGAGATGGAGGTGCAACAGCATTTGTCGGAAGATGTTTCATCTGTTTGGGATTTGGATTGCCTTTTGGATTTCAGCTTGGACGATCATTTAGATATATCCTTGGACGAGTATCGCCCTAATTCGGATGTTCCTGAACCCTCGGAAGTTCCTCCGCAAGAGATTCCCAGTATCGAGAAGGTCCGCAAGCGAGACCCGAGGCTGTCTTGCTCCAATTACCTTGCGGGTCGGGTTCCATGTGCGTGCCCGGAGCTCGATGCGAAGCTTGATGAAGAAGGTTTGCCTGGCAAGAAGCGGGCTCGGACCGTGCGGGTGTCGGCTGGGATTGCGCGGTGCCAGGTACCTGGGTGCGAGGCAGATATTAGTGAGCTCAAGGGTTATCATCGGAGACATAGGGTCTGTCTGCGTTGCGCAAATGCTAGTACGGTTACGCTCGATGGGGAGGCTAAGAGATACTGCCAACAGTGTGGAAAGTTTCACTTACTAACAGATTTTGATGAAGGTAAACGAAGCTGTAGAAGAAAATTAGAGCGTCACAACAATCGAAGGCGTAGAAAGCCTACAGATTCCAGAGTTGCAGTTGATCAAGAATTTCAACCTGTTACGCAGACTGAGGATGAAGCAGGAAAAGATAGTTCACATTTGAGCAGTGAGACAAACGAAATAGGAACTGCACTGGAGCATGAAGATGGACGAATTACTACCCTATGTTCAGCCCCTGATACCCTGAATGTGAATAGTGATAGTTTTGTATCTTTTGTTGCTTCTGTTGATACACAAGTGAATGGTGGAAAGGATAATTCTAATTCGCCATCATATTGTGACAACAAGAGTGCTTACTCATCTATGTGCCCAACAGGTCGGATATCTTTTAAGCTTTATGATTGGAATCCTGCGGAATTTCCTAGAAGGCTAAGGCACCAAATATTCCAATGGCTGGCCAGTATGCCTGTTGAGCTGGAGGGTTATATCCGCCCTGGGTGTACAATCCTGACAGTTTTTATTGCAATGCCCAGATTTATGTGGACAAGTTTACTTGAAGATCCTCTTTATTATGTGCACGACCTTGTTGCTCCAGGGAAGATGCTATCGGGAAGAGGCAACATACATGTTCATCTCAATGACATGATCTTCCGGGTCACGAAAGATGAAACTTCTGTGATGGAAGTCCAGATAAAGGTGCAGGCACCAAGGCTTCATTATGTTCATCCCACATACTTTGAGGCTGGGAAACCTATGGAATTTGTTGCTTGTGGAAGTAACTTGCTGCAATCTAAGTTTCGGCTTCTTGTATCTTTTTCTGGAAAGTATTTAAAGTATGAATATTGTGTTGCATCTCCACATAACTGGATGGGAGGTGGCATTTCTTGTGCTTTTGACAATCAGTTGTACAAGATATATGTCCCTCATACAGAGCCAAATCTCTTTGGGCCTGCATTTATTGAGGTGGAGAATGAGTCTGGTTTATCAAACTTCATTCCTGTACTCATTGGGGACAAGGAAATCTGCTCTGAAGTGGAGAGATTGCAGCAAAAACTTGATGTATCTCTTCCTTCTAAACAATTCCAGTCTGCATTAGGTGGTTCTATCTGCAGCTTCTGTGAAGCTTTTGCACTGAGACATACAGCATACTCAGACTTACTGTTAGATATAGCGTGGCTGCTTAAGGATCCTACTTTGGAAGACTTTCATAGAGCTATGACAGCTTCACAAATTCAAAGAATATGTTATTTGATAGACTTTCTGATGTGCAATGAATTAACTGTAATTTTGGGGAGAATTTTACAGAATTTGATTATTTTGACCAAAAGAACTGAAACCAACAATGTGATTAACAGGATGAGTGAGGTTGACATGACATTACTACTGAAACAAATGCGTCAAGCTAGAGATTTCCTTTATCAGAAACATCTGAGAGGTAGAGAATTGGTTGTGCACTCTGTTTTTTCTGAAATGGAAGGACATAAAGTTGCTCAAAGCTACTATCAAGACAACTTGCTATCAGTTGTGGCAATCAATAATCAGGGTGATGAGTCTAGAGCAGATGCTAAGTTGGGGGTATTGAGAACTCCAATTTCTGATGACAAAAGTGTGAGGATACCTCTTTTGAGGAGGGAGATTGTAATGAATATGGAAGAGTTGCCTAGAAGATCGGGTTATCGACATCTCGCAAGGGGATTCTTTGGTTCCCGGTCGGCTATCCTCATGATTGCTACAGTTGCTGTTTGTGTTGGGGTTTGTGCAGTCCTCCTCCATCCTGGGAGGGTTGGCGAGTTTGCAGTATCCATCAGAAGGTGCTTGTTTAGCCGATCATAG 2421 0.4424 METQAVPRTTPISPEQPPSSLQPPEPVVLGPRPGDSEMEVQQHLSEDVSSVWDLDCLLDFSLDDHLDISLDEYRPNSDVPEPSEVPPQEIPSIEKVRKRDPRLSCSNYLAGRVPCACPELDAKLDEEGLPGKKRARTVRVSAGIARCQVPGCEADISELKGYHRRHRVCLRCANASTVTLDGEAKRYCQQCGKFHLLTDFDEGKRSCRRKLERHNNRRRRKPTDSRVAVDQEFQPVTQTEDEAGKDSSHLSSETNEIGTALEHEDGRITTLCSAPDTLNVNSDSFVSFVASVDTQVNGGKDNSNSPSYCDNKSAYSSMCPTGRISFKLYDWNPAEFPRRLRHQIFQWLASMPVELEGYIRPGCTILTVFIAMPRFMWTSLLEDPLYYVHDLVAPGKMLSGRGNIHVHLNDMIFRVTKDETSVMEVQIKVQAPRLHYVHPTYFEAGKPMEFVACGSNLLQSKFRLLVSFSGKYLKYEYCVASPHNWMGGGISCAFDNQLYKIYVPHTEPNLFGPAFIEVENESGLSNFIPVLIGDKEICSEVERLQQKLDVSLPSKQFQSALGGSICSFCEAFALRHTAYSDLLLDIAWLLKDPTLEDFHRAMTASQIQRICYLIDFLMCNELTVILGRILQNLIILTKRTETNNVINRMSEVDMTLLLKQMRQARDFLYQKHLRGRELVVHSVFSEMEGHKVAQSYYQDNLLSVVAINNQGDESRADAKLGVLRTPISDDKSVRIPLLRREIVMNMEELPRRSGYRHLARGFFGSRSAILMIATVAVCVGVCAVLLHPGRVGEFAVSIRRCLFSRS 806
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa08g0382 806 MobiDBLite consensus disorder prediction 212 254 - -
Bisa08g0382 806 MobiDBLite consensus disorder prediction 11 30 - -
Bisa08g0382 806 SUPERFAMILY SBT domain 145 225 IPR036893 GO:0003677|GO:0005634
Bisa08g0382 806 ProSiteProfiles Zinc finger SBP-type profile. 144 221 IPR004333 GO:0003677
Bisa08g0382 806 MobiDBLite consensus disorder prediction 1 44 - -
Bisa08g0382 806 Pfam SBP domain 147 221 IPR004333 GO:0003677
Bisa08g0382 806 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 102 551 IPR044817 GO:0003677
Bisa08g0382 806 Gene3D - 143 208 IPR036893 GO:0003677|GO:0005634
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa08g0382 Bisa-ChrBisa08 6632410 6642481 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa08g0382 49 799 SBP-box Gene Family AT5G18830 49.166 0.0 692
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Bisa08g0382 SBP 1.5e-27 No_clan