Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa08g0362 ATGTCGTCAGATCTTTTCACTGTCCTAAATCCAACATTGTTGTTTCAGACACCTCCCACTTTCGCCACCAGCTTCAACGACTACAGTGCTCATCAGTATAATCAGCAAAATCTCATGAAGTTTCGGATCGGAGAAGCCTCCGGCGAAACCAGTCATCATCATCAGAATAATAATAATAGTAACCAAGTGGTAGATTATATGCTCAACAACAACAATCTTCAACAAGCTTGTGGGTTTTATGGCACAACGGCTTCTTCTTCTTCTTGTTCTTTTGATAAGCTGAGTTTTGCAGATGTGATGCAGTTTGCAGATTTCGGGCCCAAGTTGGCCTTGAATCAGAGCAAGAACTGCGAACTGGGAGAAGAAGAAGAAGAAGAAGAAGGAGTAGGAGGGGAAGAGTCTGGGATGGACCCAGTGTACTTCTTGAAGTTTCCAGTGTTAAACGACAAGTCCTTGGAGGGCCAGAACCTGATGGTGAACGTGGAAGATAGTAAAGGACCAGAATCGGATCATAATAATAATAGGTCGGTGGAGGACATGGAGAAGGTGAATAATGATGATAATAATGATAACCCTAGTAGAGAAGTACAGGAGAATAATAACAACAATGGCAATAAGAGCAAGAGGAAGAGGCCCAGAACTACCAAGACGAGTGAAGAAGTGGAAAGCCAGCGAATGACTCATATCGCCGTCGAAAGGAACCGTAGGAAGCAGATGAACGAGCACCTTCGTGTCTTGCGGTCACTCATGCCTGGTTCTTACGTCCAAAGGACAAGTCCGCCTCTTCAGCCACCATTTTTTCCAGCGTTGCCTAATCTGCCAAACGACCAGATGAAGCTGGTGGAGTTCGAAACTGGGCTCAGGGAAGAAACAGCAGAGAACAAGTCCTGCCTGGCTGACGTGGAAGTGAAGCTTCTAGGGTTTGATGCAATGATCAAGATCCTATCAAGAAGAAGGCCTGGACAGTTGATTAAGACCATTGCTGCACTCGAAGATCTGCAGCTTATTATCCTTCACACCAACATCACCACTATTGAACAAACAGTTCTTTATTCATTCAATGTCAAGGTGGCAAGTGATTCAAGGTTCACAGCAGAAGATATAGCCAGCTCTGTGCAACAGATTTTCAGTTTTATTCATGAAAACACTGGAATGTAA 1158 0.4421 MSSDLFTVLNPTLLFQTPPTFATSFNDYSAHQYNQQNLMKFRIGEASGETSHHHQNNNNSNQVVDYMLNNNNLQQACGFYGTTASSSSCSFDKLSFADVMQFADFGPKLALNQSKNCELGEEEEEEEGVGGEESGMDPVYFLKFPVLNDKSLEGQNLMVNVEDSKGPESDHNNNRSVEDMEKVNNDDNNDNPSREVQENNNNNGNKSKRKRPRTTKTSEEVESQRMTHIAVERNRRKQMNEHLRVLRSLMPGSYVQRTSPPLQPPFFPALPNLPNDQMKLVEFETGLREETAENKSCLADVEVKLLGFDAMIKILSRRRPGQLIKTIAALEDLQLIILHTNITTIEQTVLYSFNVKVASDSRFTAEDIASSVQQIFSFIHENTGM 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa08g0362 385 MobiDBLite consensus disorder prediction 161 226 - -
Bisa08g0362 385 Gene3D - 213 295 IPR036638 GO:0046983
Bisa08g0362 385 Pfam Helix-loop-helix DNA-binding domain 224 253 IPR011598 GO:0046983
Bisa08g0362 385 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 223 259 IPR036638 GO:0046983
Bisa08g0362 385 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 223 281 IPR011598 GO:0046983
Bisa08g0362 385 MobiDBLite consensus disorder prediction 117 136 - -
Bisa08g0362 385 PANTHER TRANSCRIPTION FACTOR FAMA 260 376 IPR044283 GO:0003700|GO:0010052
Bisa08g0362 385 MobiDBLite consensus disorder prediction 164 193 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa08g0362 Bisa-ChrBisa08 6355126 6357042 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa08g0362 27 385 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G24140 50.000 3.63e-110 327
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Bisa08g0362 HLH 7.2e-07 No_clan