Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa08g0348 ATGCGGCGGTGGCTTTGTTGTACTTGTCAGGTTGAAGAGTCTTACCCATCTGAAAATGAGCAACACCTAAAAAGCCCAAGGAATTATGGAGATGGTTACCCAAAAGGCTCAAAGGCATCTGCTCCTGTTAAACCTGAAGCACAAAAGGCTGCACCTCCTATCGAAGTTCCAGCATTAGCTTTAGACGAACTAAAGGAATTGACTGACAACTTTGGATCAAAGGCATTGATTGGTGAAGGATCTTATGGGAGGGTATATTTTGCAACATTAAACAATGGAAAGGCTGTCGCTGTGAAAAAGCTTGATGTTTCATCTGAACCTGAATCAAATGTTGAGTTTTTGACCCAGGTTTCCATGGTCTCAAGAATGAAGAATGAAAATTTTGTTGAGTTACAAGGTTACTGTGTTGAAGGAAACCTTCGTATACTTGCATATGAGTTTGCAACTATGGGCTCTCTTCATGACATATTGCATGGTAGGAAGGGAGTTCAAGGGGCACAACCAGGACCAACCCTTGACTGGATGCAGCGAGTTAGAATTGCAGTTGATGCAGCAAGGGGTTTGGAATATTTACATGAGAAAGTTCAGCCATCTATTATACACAGAGATATCCGATCAAGCAATATACTTATTTTTGAAGATTTTAAAGCAAAGGTGGCTGATTTCAACCTTTCAAATCAGGCCCCTGACATGGCTGCACGCCTTCATTCCACTCGAGTGTTGGGAACTTTTGGTTATCATGCCCCTGAGTATGCAATGACTGGTCAGTTGACTCAAAAGAGTGATGTCTACAGCTTTGGTGTTGTTCTTCTTGAGCTTCTTACTGGGAGAAAACCTGTGGATCATACCATGCCTCGTGGACAGCAAAGTCTTGTTACATGGGCAACCCCAAGATTGAGTGAAGATAAAGTCAAACAATGCGTGGATCCTAAACTGAAGGGAGAATATCCTCCTAAAGGAGTTGCAAAGCTGGCAGCTGTTGCAGCACTATGCGTGCAGTATGAAGCTGAGTTTAGGCCAAATATGAGCATCGTTGTTAAAGCCCTGCAACCACTTCTGAAGACTCTTCCTCCTCAAGCACCAGAACCTTGA 1092 0.4313 MRRWLCCTCQVEESYPSENEQHLKSPRNYGDGYPKGSKASAPVKPEAQKAAPPIEVPALALDELKELTDNFGSKALIGEGSYGRVYFATLNNGKAVAVKKLDVSSEPESNVEFLTQVSMVSRMKNENFVELQGYCVEGNLRILAYEFATMGSLHDILHGRKGVQGAQPGPTLDWMQRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNILIFEDFKAKVADFNLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLTGRKPVDHTMPRGQQSLVTWATPRLSEDKVKQCVDPKLKGEYPPKGVAKLAAVAALCVQYEAEFRPNMSIVVKALQPLLKTLPPQAPEP 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa08g0348 363 PIRSF ILK 27 360 - -
Bisa08g0348 363 Pfam Protein tyrosine and serine/threonine kinase 76 349 IPR001245 GO:0004672|GO:0006468
Bisa08g0348 363 PANTHER PTO-INTERACTING PROTEIN 1-LIKE 4 355 - -
Bisa08g0348 363 MobiDBLite consensus disorder prediction 17 49 - -
Bisa08g0348 363 FunFam PTI1-like tyrosine-protein kinase 3 149 358 - -
Bisa08g0348 363 SMART tyrkin_6 71 349 IPR020635 GO:0004713|GO:0006468
Bisa08g0348 363 Gene3D Transferase(Phosphotransferase) domain 1 149 358 - -
Bisa08g0348 363 ProSitePatterns Tyrosine protein kinases specific active-site signature. 199 211 IPR008266 GO:0004672|GO:0006468
Bisa08g0348 363 ProSiteProfiles Protein kinase domain profile. 71 353 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa08g0348 363 SUPERFAMILY Protein kinase-like (PK-like) 53 349 IPR011009 -
Bisa08g0348 363 ProSitePatterns Protein kinases ATP-binding region signature. 77 100 IPR017441 GO:0005524
Bisa08g0348 363 Gene3D Phosphorylase Kinase; domain 1 38 147 - -
Bisa08g0348 363 FunFam PTI1-like tyrosine-protein kinase 3 34 147 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa08g0348 Bisa-ChrBisa08 6091294 6094869 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa08g0348 5 361 Receptor kinase-like Gene Family AT4G02010 45.556 7.06e-94 293
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIII Bisa08g0348 PK_Tyr_Ser-Thr 1.6e-45 CL0016