Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa08g0335 ATGGCGTTTTCTCTGCATCCCCTTTTCCTTTGCTCACTGGTTTTGCTTCTGCTACCTGTTTGTGTTTATGCCCAAACCAGAAGTAGTAATATTAGTGTCGGCGATTCTCTCACCGCAGGAGAAGGCAACCAGACGTGGGTGATTTCACCTTCTGGGGATTTTGCCTTTGGGTTTCAAACCCCAGAAGATAATGATGGTCCGTTCTTGCTTTCCATATGGTATGCTAGGATTCCAAACAGAACCGTCGTTTGGTATGCCAATGAAGACAACCGTGCTCCCAGGGGATCAAGAGCACAACTTACTGCTGAAGGGCTAGTGCTTACTTCTCCTAATGGTGGGGAGCTGTGGAAACAAGATAATCCTGCTGGTGTTGTTGCTCGTGGTGCCTTGGATGACTTTGGCAACTTGATTCTTAAAGATAGCACCTCCGAATCTGTTTGGGAGACCTTCAAGAATCCTAGAGACACCATGTTGCCCTCGCAGTTTCTGGAAAGGGGAGGAATGCTTTCTTCTCGAAGGTCAGAGAGGGATTTCTCAAACGGAAGGTTCCAGCTCGTTCTTCGGGATGATGGTAATCTTGTGATGCATTCTATAAACATACCATCTGGGTATGCTAATGAAAATTATTTTGAAAGTAGTACTGTTGAGTCCAATACATCAAGCCCCGGCCTTCAACTGGTCTTCAACAAATCAGGAGACATGTATATTTTGAGAGAGAACAATGGCACGTACAAGTTTTCAAACTTGGCAGCTCCTTCTCCCACTCAATTTTATCTTCGAGCTACTCTTAATTTTGATGGAGTTTTCTCTTTCTATCAATATCCAAAGACTTCCTTTGGCAATGAAACTTGGAGCCCTCTCTGGTCTCAGCCGGATAATATCTGTACTGATAGCCTTGTTTCTACAGGTAGTGGCGTTTGTGGATATAATAGCATCTGCTATTTGGGTGATAATAAGAGGCCGAGTTGCCAATGCCCAAAAGGCTATATTCTACTTGATCCTAAAGACCCGTATGGTAGCTGTATACCAGATTTCATTCAGGGATGTAAAGAAGATGAGCTTAGTCAAGGGAAAGATCTATATGAGTTTGAGGAGTCAGAAAACATTGATTGGCCTTTGGCTGATTCTGTGCTTCAAAAGCCTTTTACTGAAGAAAATTGCAAACAGGCTTGTATGGAAGATTGCCTTTGTGCTGTTGCAATTTTCAGATTAGGTGACAGCTGCTGGAAGAAGAAGTTGCCACTTTCAAATGGCAGATTTGACACAGGTCTCGATGGTGGTAAGGCTTTTATCAAAGTGAGGAAAGACAATTCCTCGTTAATTGGTCCTCCTGGTCCTCCACTCATCAAGAGAAAGAATCAGGACACTTTGATTTTGGTAGGCTCTGTACTCTTGGGTGGCTCTGGATTTCTTAATCTCATATTGATTGGAGCATTATGTATGGGCTTTTCCTTCACTTACAAATACCAGAAGAAGCTTAAAATAGTTGGCCGAAGCGACAGTGCTGTAGCAACCAACTTGCGTTGTTTTACTTATAAGGAGCTTGAAGAAGCTACAGATGGGTTCAAGGACGAGTTAGGAAGGGGAGCTTTTGGTATCGTTTATAAAGGAACCATATACATGCGCTCCACAATTCATGTGGCGGTCAAAAAATTGAACAGCTTTCTCTTGCAAGAAATTGAGAAGGAATTCAAGAATGAAGTGAATGTGATTGGTCAGACCCATCATAAGAATTTGGTTCGTTTGCTTGGTTTCTGCGAGGAGGGAACAGAAAGGTTATTGGTATATGAGTACATGAGCAATGGTACATTGGCAAGCTTTCTTTTCAATGACTCGAAACCCAGTTGGAACTTAAGACTAACAATTGCCTTCGGGATTGCCAGAGGGCTTGTTTATTTACATGAAGATTGCAGCACTCAGATCATCCACTGTGACATTAAGCCTCAGAACATACTCCTTGATGATTACTTCAACGCTCGAATCTCTGACTTTGGATTGGCTAAGCTCTTGAACATGAATCAGAGCCGAACCCATACAGGCATAAGGGGAACAAAAGGCTATGTTGCACTTGAATGGTTCAAGAATATGCCTATCACTGCCAAAGTAGATGTCTATAGCTTTGGTGTGTTGCTGCTTGAGATTGTCTGTTGCAGAAAAAGTGTGGATATGGAGGAAGAGAATCAAGATAAAGTAATCTTAACAGACTGGGCTTATGACTGCTACAGAGAAAGGTCTCTAGAGGCTTTGGTTGAACAAGATCAGGAGGCATTGGATGACAGGAAGAACCTGGAGAAGTTAGTAATGATTGCCCTTTGGTGTGTTCAAGAGGACCCAACTGTTAGGCCCACCATGAGAAGGGTTGCTCAGATGCTTGAAGGTGTTGCCGAAGTGCTCGATCCACCATGCATCAGTGTGAGTCAAGATCTGTATCTCTCTCTTTCTCAGCATGATTAG 2454 0.4307 MAFSLHPLFLCSLVLLLLPVCVYAQTRSSNISVGDSLTAGEGNQTWVISPSGDFAFGFQTPEDNDGPFLLSIWYARIPNRTVVWYANEDNRAPRGSRAQLTAEGLVLTSPNGGELWKQDNPAGVVARGALDDFGNLILKDSTSESVWETFKNPRDTMLPSQFLERGGMLSSRRSERDFSNGRFQLVLRDDGNLVMHSINIPSGYANENYFESSTVESNTSSPGLQLVFNKSGDMYILRENNGTYKFSNLAAPSPTQFYLRATLNFDGVFSFYQYPKTSFGNETWSPLWSQPDNICTDSLVSTGSGVCGYNSICYLGDNKRPSCQCPKGYILLDPKDPYGSCIPDFIQGCKEDELSQGKDLYEFEESENIDWPLADSVLQKPFTEENCKQACMEDCLCAVAIFRLGDSCWKKKLPLSNGRFDTGLDGGKAFIKVRKDNSSLIGPPGPPLIKRKNQDTLILVGSVLLGGSGFLNLILIGALCMGFSFTYKYQKKLKIVGRSDSAVATNLRCFTYKELEEATDGFKDELGRGAFGIVYKGTIYMRSTIHVAVKKLNSFLLQEIEKEFKNEVNVIGQTHHKNLVRLLGFCEEGTERLLVYEYMSNGTLASFLFNDSKPSWNLRLTIAFGIARGLVYLHEDCSTQIIHCDIKPQNILLDDYFNARISDFGLAKLLNMNQSRTHTGIRGTKGYVALEWFKNMPITAKVDVYSFGVLLLEIVCCRKSVDMEEENQDKVILTDWAYDCYRERSLEALVEQDQEALDDRKNLEKLVMIALWCVQEDPTVRPTMRRVAQMLEGVAEVLDPPCISVSQDLYLSLSQHD 817
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa08g0335 817 ProSitePatterns Serine/Threonine protein kinases active-site signature. 641 653 IPR008271 GO:0004672|GO:0006468
Bisa08g0335 817 Gene3D - 22 152 IPR036426 -
Bisa08g0335 817 SMART serkin_6 520 791 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa08g0335 817 Gene3D Phosphorylase Kinase; domain 1 495 598 - -
Bisa08g0335 817 Gene3D - 153 278 IPR036426 -
Bisa08g0335 817 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase LECRK1 25 151 - -
Bisa08g0335 817 Pfam D-mannose binding lectin 81 163 IPR001480 -
Bisa08g0335 817 FunFam S-receptor-like serine/threonine-protein kinase 489 598 - -
Bisa08g0335 817 FunFam Serine/threonine-protein kinase 154 298 - -
Bisa08g0335 817 SUPERFAMILY Protein kinase-like (PK-like) 503 792 IPR011009 -
Bisa08g0335 817 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 37 803 - -
Bisa08g0335 817 SUPERFAMILY alpha-D-mannose-specific plant lectins 68 196 IPR036426 -
Bisa08g0335 817 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 599 799 - -
Bisa08g0335 817 ProSiteProfiles Bulb-type lectin domain profile. 22 151 IPR001480 -
Bisa08g0335 817 Pfam Protein tyrosine and serine/threonine kinase 522 791 IPR001245 GO:0004672|GO:0006468
Bisa08g0335 817 PIRSF SRK 1 815 IPR024171 GO:0004674
Bisa08g0335 817 ProSiteProfiles Protein kinase domain profile. 520 798 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa08g0335 817 CDD STKc_IRAK 526 793 - -
Bisa08g0335 817 ProSitePatterns Protein kinases ATP-binding region signature. 526 551 IPR017441 GO:0005524
Bisa08g0335 817 SMART blect_4 36 153 IPR001480 -
Bisa08g0335 817 Gene3D Transferase(Phosphotransferase) domain 1 599 798 - -
Bisa08g0335 817 Coils Coil 746 766 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa08g0335 Bisa-ChrBisa08 5957641 5960094 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa08g0335 506 793 Receptor kinase-like Gene Family AT1G60800 43.878 1.09e-71 244
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Bisa08g0335 PK_Tyr_Ser-Thr 5.2e-49 CL0016