Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa08g0328 ATGGCTTTTTGTCTGCAACCCCTTCTCCTTTGCTTACTGATTCTGCTCCTGCCACCTGTTTGTGTTTTTGCCCAAACCAGAAGTAGTAATATTAGTGTGGGCGATTTTCTCACCGCAGGAGACGGCGACTCCACGTGGGTGGTTTCACCTTCCGGGGATTTTGCCCTTGGGTTTGAACCCCTGCAAGATAATGATGTTTCGTTCTTGCTTTCCATATGGTATGCTAAGATTCCAAACAAAACCATCGTTTGGTATGCCAATGGAGACAATCCTGCTCCGAAGGGGTCAAGAGCACAACTTACTGCTCAAGGAGGGCTAGTGCTTACTTCTCCTAGTGGTGGGGATCTATGGAAACCAGATAATCTTACTGGTACTGTTGCTCTTGCTGCCTTGGATGACTTTGGCAACTTTGTTCTTCAGGATAAGACTTCCAAATCTGTCTGGGAGACCTTCAAGGATCCTAGGGATACCATGTTGCCCTCCCAGTTTCTAGGAAGGGGAGGAATGCTTTCTTCTCGAAGGTCAGAGACGGATTTCTCAGAGGGAAGGTTCCAGCTCGTTCTTAGGGATGATGGTAATCTTGTGATGCATTCTATAAACTTACCATCTGGGTATGCTAATGAAAATTATTTTGAAAGTAGTACTGTTGAGTCCAATACATCAAGTCCCGGCCTTCAACTGGTCTTCAATAAATCCGGAGACATGTATATTTTGAGAGAGAACAATGGCACGTACAAGTTTTCAAACTTGGCAGCTCCTTCTCCCACTCAATTTTATCTTCGAGCTACTCTTAATTTTGATGGAGTTTTCTCTTTCTATCAATATCCAAAGACTTCCTTTGGCAATGAAACTTGGAGCCCTCTCTGGTCTCAGCCGGATAATATCTGTACTGATAGCCTTGTTTCTACTGGTAGTGGCGTTTGTGGATATAATAGCATCTGTTATTTGGGTGATAATAAGAGGCCAAATTGCCGATGCCCAGAAGGCTATTCTCTACTTGATCCCAAAGACCCGTATGGTAGCTGTAAACCAGATTTCATTCAAGGATGTAAAGAAGATGAGCTTAGTCAAGGGAAAGATCTATATGAGTTTAATGTGTCAGTAAACATTGATTGGCCTTTGGCTGATTCTGTGCTTCAAAAGCCTTTTACTGAAGAAGATTGCAAACAGGCTTGTATGGAAGATTGCCTTTGTGCTGTTGCAATTTTCAGATTAGGTGATAGCTGCTGGAAGAAGAAGTTGCCACTTTCAAATGGCAGATTTGACACAAGTCTAGATGGTGGTAAGGCTTTTATCAAAGTGAGGAAAGACAATTCCTCGTTAATTTGTGACAGCTACTGGAAGAAAAAGTTGCCACTTTCAAATGGCAGATTTGACACAAGTCTAGATGGTGGAAGGGCTTTTATTAAAGTGAGGCAAGACAATTCCTCCTTAATTGGTCCTCTTGGTCCTCCAATCATCAAGAGAGAGAATCAGGACACTTTGATTTTGGTAGGCTCTGTACTCTTGGGTGGCTCTGGATTTCTTAATCTCATATTGATTGGAGCATTATGTATGGGCTTTTCCTTCACTTACAAATACCAGAAGAAGCTTAAAAAAGTTGGCCGAAGTGACAGTGCTGTAGCAACCAATTTGCGTTGTTTTACTTATAAGGAGCTTGAAGAAGTTACAAATGGGTTCAAGGAAGAGTTAGGAAGGGGAACTTTTGGTATTGTTTATAAAGGAACCATGTATATGGGCTCTGCAATTCATGTGGCGGTAAAAAAATTGAACGGCTTTCTCTTACAAGAAATTGGGAAGGAATTCAAGAATGAAGTGAATGTGATTGGTCAGACCCATCATAAGAATTTAGTTCGTTTGCTTGGTTTCTGCGATGAGGGAGCAGAAAGAGAAGGGTCTCTAGATTGTTTGGTTGAACAAGATCAGGAGGCATTAGATGACAGGAAGAACCTGGAGAAGTTGGTAATGATTGCCCTTTGGTGTGTTCAAGAGGACCCAACTCTTAGGCCTACCATGAGAAAGGTTGCTCAGATGCTTGAAGGTGTTGCTGAAGTGCTCGATCCACCATGCCTGGTCCCAGAAAGTTTGACTTTCGCATTTTCTGTGAAGCTCTGTTGCGTGGAAGCTGCTGTGCTCTCGGAGAGAGAAAAGAGAATTCAAACTCCGACCACCGTAGGAACACTACATCATCGGCAGCAGCACCACCCAACGTTTCATCTGCAGAGACTGCTTGGTTCCAATCATTTTACACACAAACAGAGAATAAGCAGAACAAGCACCCAATTGCAGTGGCCGGCTGGCCGCTGCCACCGCCGCAGCAGTCGATGCCGCAGTGGCCGCAGCACAGGTTGCCGACCGAAATCGAGGTCTCGCAGGAGCAACATGCCAGTGTCAGATTCTGGCGATGACCCAGCATTCCAAACGCTGTCTTCTCCATTGCCAGTCCCACAGATTCGTACCCCAGCTCAGTTATCAATGGCGGATCGAAGGATGTTGCAGGAGTCGGAGTGGGGGCTAACAGGGGAAGAATGTAGGTTCTCCACAGCACATAGCACTCCACGTTTCGCCAAATCTTGTTCTTATGGGTCAGTGGCGACGCCGAAGAGCGTGTGTGCGGATAGACTGGTGTGGCAACATGGGAATTTTCCAAATTACATGGCGAATTCTCAATCATTCAAGGCGAAATTGAGGTTTCGGAGTGCTCTGAAGCAACGGCCAGAAGCAGGAGGAGCGAAGAAGAGGCTTTCGCTGAATGAAATGATGGAGTCAAGGAGTAGCTTGACTGAGGTTAGAATGCAAAGGTCATGCTCGCAGGTTCAGGAGGCAGCGGCGACGGCAGCTACGGCCGAGATGGGGTAG 2859 0.454 MAFCLQPLLLCLLILLLPPVCVFAQTRSSNISVGDFLTAGDGDSTWVVSPSGDFALGFEPLQDNDVSFLLSIWYAKIPNKTIVWYANGDNPAPKGSRAQLTAQGGLVLTSPSGGDLWKPDNLTGTVALAALDDFGNFVLQDKTSKSVWETFKDPRDTMLPSQFLGRGGMLSSRRSETDFSEGRFQLVLRDDGNLVMHSINLPSGYANENYFESSTVESNTSSPGLQLVFNKSGDMYILRENNGTYKFSNLAAPSPTQFYLRATLNFDGVFSFYQYPKTSFGNETWSPLWSQPDNICTDSLVSTGSGVCGYNSICYLGDNKRPNCRCPEGYSLLDPKDPYGSCKPDFIQGCKEDELSQGKDLYEFNVSVNIDWPLADSVLQKPFTEEDCKQACMEDCLCAVAIFRLGDSCWKKKLPLSNGRFDTSLDGGKAFIKVRKDNSSLICDSYWKKKLPLSNGRFDTSLDGGRAFIKVRQDNSSLIGPLGPPIIKRENQDTLILVGSVLLGGSGFLNLILIGALCMGFSFTYKYQKKLKKVGRSDSAVATNLRCFTYKELEEVTNGFKEELGRGTFGIVYKGTMYMGSAIHVAVKKLNGFLLQEIGKEFKNEVNVIGQTHHKNLVRLLGFCDEGAEREGSLDCLVEQDQEALDDRKNLEKLVMIALWCVQEDPTLRPTMRKVAQMLEGVAEVLDPPCLVPESLTFAFSVKLCCVEAAVLSEREKRIQTPTTVGTLHHRQQHHPTFHLQRLLGSNHFTHKQRISRTSTQLQWPAGRCHRRSSRCRSGRSTGCRPKSRSRRSNMPVSDSGDDPAFQTLSSPLPVPQIRTPAQLSMADRRMLQESEWGLTGEECRFSTAHSTPRFAKSCSYGSVATPKSVCADRLVWQHGNFPNYMANSQSFKAKLRFRSALKQRPEAGGAKKRLSLNEMMESRSSLTEVRMQRSCSQVQEAAATAATAEMG 952
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa08g0328 952 SUPERFAMILY alpha-D-mannose-specific plant lectins 68 197 IPR036426 -
Bisa08g0328 952 FunFam Serine/threonine-protein kinase 155 299 - -
Bisa08g0328 952 SUPERFAMILY Protein kinase-like (PK-like) 541 628 IPR011009 -
Bisa08g0328 952 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 630 691 - -
Bisa08g0328 952 Gene3D - 154 281 IPR036426 -
Bisa08g0328 952 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase LECRK1 25 152 - -
Bisa08g0328 952 Pfam Protein tyrosine and serine/threonine kinase 560 627 IPR001245 GO:0004672|GO:0006468
Bisa08g0328 952 Gene3D - 22 153 IPR036426 -
Bisa08g0328 952 SMART blect_4 28 154 IPR001480 -
Bisa08g0328 952 ProSitePatterns Protein kinases ATP-binding region signature. 564 589 IPR017441 GO:0005524
Bisa08g0328 952 MobiDBLite consensus disorder prediction 788 816 - -
Bisa08g0328 952 MobiDBLite consensus disorder prediction 770 787 - -
Bisa08g0328 952 ProSiteProfiles Bulb-type lectin domain profile. 22 152 IPR001480 -
Bisa08g0328 952 CDD B_lectin 31 154 IPR001480 -
Bisa08g0328 952 Gene3D Phosphorylase Kinase; domain 1 532 634 - -
Bisa08g0328 952 MobiDBLite consensus disorder prediction 757 816 - -
Bisa08g0328 952 FunFam S-receptor-like serine/threonine-protein kinase 527 631 - -
Bisa08g0328 952 Pfam D-mannose binding lectin 81 165 IPR001480 -
Bisa08g0328 952 Pfam Protein of unknown function (DUF4005) 852 929 IPR025064 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa08g0328 Bisa-ChrBisa08 5840237 5846260 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa08g0328 673 932 IQD Protein Family AT3G16490 31.343 1.90e-22 99.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Bisa08g0328 DUF4005 1.5e-09 No_clan