Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa08g0301 ATGTCATTCCATCGTCTTCATCTTCGTCATCATCATCCTCTTCCTCATGTTATTATACCCACTGGCTCCAAAATCTTCTCGCTCAAAACCCATTACGCCATTACTCTATCTCCATGTCCAAACTCTCTTAGATTCAACGGCACCATGCAGCTCAAACATCTCTGCGTCGTTTTACCTGCAGATTCTGAAGAATTCGGGCATCACCCACGACCAAAAGTGAAACGATCTTCCCAGAAAGAGACCAAGATCAAAAAGCCTGACAGGGCTTGTGGGGGTCAAGTTCTTGCCTTCCTTCATGACTCTCTGAGAAAAGTATATGACGTAAACTGTTTGATGTTTTGCCACAATGAAGTAAAAAGGAAGAAAAGCTCGGGTGTCGAGTACCATGACATGGATGGTGTACAACTCTCTGCTAAGATTGGTAGAGACAACCCCAGAATCTTCAGTTTCGCTGAGATTTTCATTGGGTCTCATGGTTTCAGTGAGGATTATGTTCTGGGAAGTGGAGGATTTGGCAGAGTGTTTAAGGCTGTTTTGCCTAGTGATGGAACAGTGGTTGCTGTGAAATGCTGCTTGTCGGAGAAAGGGCAGCAATTTGAGAAGACTTTTGCTGCTGAGTTAGCAGCTGTGGCTCATCTTCGTCACAAGAACCTTGTGAGGCTGAGGGGTTGGTGTGTCCATGAAGATCAGCTGTACCTTGTTTATGATTACATGCCGAACCTCAGCCTTGACCGGATTCTGTTTCGCCGGCCTGAGAATTCGAATGCTGAGCCGTTGGGCTGGGAGAGACGTGGGAAAATTGTGAAGGGGTTGGCTGCTGCATTGTATTATCTTCATGAGCAGTTGGAGACTCAGATCATTCACAGGGATGTGAAAACCAGCAATGTTATGCTTGATTCTCAGTATAATGCTCGGTTGGGTGACTTTGGCTTGGCTAGGTGGCTAGAACACGAGCTTGAGTATCATCATGATCAAACCAAGAAAACATCAACGAAAATTGACCCTTTCAGGTTGGCAGAGACAACAAGAATTGGTGGCACAATTGGGTATTTACCCCCAGAGAGTTTCCAGAAAAGAAGCATAGCCACTTCAAAATCTGATGTTTTCAGCTTTGGGATAGTTGTGTTGGAAGTGGCATCTGGAAGGAGAGCCATTGATTTGACATACCCAGATGATCAAATCATTCTGCTTGACTTCATCAGAAAGATGTCTGATGAAGGAAAGCTTCTAGAAGCCGGTGATGCTCGTCTGCCTGACGGTTCCTACAAGCTTTGGGAGGTGGAGCGCCTGCTTCACATAGGCCTACTCTGCACACTCCATGAGCCACAAACGAGGCCTAGCATGAAATGGGTTATAGAAGCACTCTCTGACATTTCAAACCATTTACCATCTCTTCCTTCGTTCCATTCCCATCCTCTATACATCACTTTATCGTCTCCATCTGATACCAGTCCTAGCAGTACAAATGCCTCTAGTTCTGTCACAACAGACAATGTCAGCACAATCACCAACTTTTCTTCATCCAACTATGTCACAGCAAATGGGAAAACAATATACATGACTGCTGAAGACAGGAACAGTGAAATCAACTCTGCAAAGAGCCTGCGTTACAACCCATCATCATTTCCTGTGGTTGAAACTCCAAGGCAAATTTCATACAAGGAGATTGTGTTAGCTACAGATCATTTCTCAGAGTCAAGAAAGGTGGCTGAGCTAGACTTTGGCAGTGCCTACCACGGCGTCCTTGAGGACCGTTACCATGTCATGGTGAAACGCCTTGGCATGAAGACATGCCCTGCATTGCGCCAAAGATTCTCGAATGAGCTGCGGAATCTGGGGAGGCTTCGCCACCGGAATCTGGTGCAGCTTCGAGGGTGGTGCACTGAGCAAGGGGAGATGCTTGTTGTGTATGATTACTCAGCAACAAGGATGCTGAGTCACCAGCTTCTCCGCCATAACAATCACAGAAATGGGTGTTCTTCTGTCCTGAAATGGCATCAGAGATACAGCATAGTGAAATCACTTGCTTCTGCCATTCTGTATCTTCATGAGGAATGGGAAGAACATGTGATTCACAGAAATATCACCTCTTCAGCTGTCATCCTTGAACCAGACATGAACCCCAGACTCAGCTCCTTTGCCCTGGCTGAGTTCTTGACCCGGAATGAGCATGGCCATCATGTAGTCAAAGACACTAGCAAATCCGTTAGAGGGATTTTCGGCTACATGTCACCGGAGTACATGGAATCCGGGGAAGCAACCTCTGCAGCTGATGTCTATAGTTTTGGTGTGGTGATGCTTGAAGTTATCAGTGGACAGATGGCAGTGGATTTCAGGCAGCCTGAGGTGCTGTTAGTGAAGAAGGTTCATGAGTTTGAGATAAGAAAAAGACCACTGGAGGAATTGGCTGACAGGAGGCTCAATGGAGAGTACAATTACAATGAACTGATGAGAATGGTGAAGTTGGGAATTGCATGTACTAGGTCTAATCCAGAGGTAAGACCAAGCATGAGACAAATAGTAGGGATTCTTGATGGTAATGACAGATTAATCATGGAAGCAAACCAGAAAGAGAGCAGGGAAGTATGGAAACAGAGGAATGCTTGTTCTTTGTCATTGATCAGGAGAATCCAAGCTCTAGGAATACAGTGA 2652 0.4566 MSFHRLHLRHHHPLPHVIIPTGSKIFSLKTHYAITLSPCPNSLRFNGTMQLKHLCVVLPADSEEFGHHPRPKVKRSSQKETKIKKPDRACGGQVLAFLHDSLRKVYDVNCLMFCHNEVKRKKSSGVEYHDMDGVQLSAKIGRDNPRIFSFAEIFIGSHGFSEDYVLGSGGFGRVFKAVLPSDGTVVAVKCCLSEKGQQFEKTFAAELAAVAHLRHKNLVRLRGWCVHEDQLYLVYDYMPNLSLDRILFRRPENSNAEPLGWERRGKIVKGLAAALYYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELEYHHDQTKKTSTKIDPFRLAETTRIGGTIGYLPPESFQKRSIATSKSDVFSFGIVVLEVASGRRAIDLTYPDDQIILLDFIRKMSDEGKLLEAGDARLPDGSYKLWEVERLLHIGLLCTLHEPQTRPSMKWVIEALSDISNHLPSLPSFHSHPLYITLSSPSDTSPSSTNASSSVTTDNVSTITNFSSSNYVTANGKTIYMTAEDRNSEINSAKSLRYNPSSFPVVETPRQISYKEIVLATDHFSESRKVAELDFGSAYHGVLEDRYHVMVKRLGMKTCPALRQRFSNELRNLGRLRHRNLVQLRGWCTEQGEMLVVYDYSATRMLSHQLLRHNNHRNGCSSVLKWHQRYSIVKSLASAILYLHEEWEEHVIHRNITSSAVILEPDMNPRLSSFALAEFLTRNEHGHHVVKDTSKSVRGIFGYMSPEYMESGEATSAADVYSFGVVMLEVISGQMAVDFRQPEVLLVKKVHEFEIRKRPLEELADRRLNGEYNYNELMRMVKLGIACTRSNPEVRPSMRQIVGILDGNDRLIMEANQKESREVWKQRNACSLSLIRRIQALGIQ 883
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa08g0301 883 FunFam Receptor like protein kinase S.2 134 237 - -
Bisa08g0301 883 ProSiteProfiles Protein kinase domain profile. 563 850 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa08g0301 883 ProSitePatterns Serine/Threonine protein kinases active-site signature. 286 298 IPR008271 GO:0004672|GO:0006468
Bisa08g0301 883 FunFam Receptor like protein kinase S.2 641 868 - -
Bisa08g0301 883 MobiDBLite consensus disorder prediction 66 85 - -
Bisa08g0301 883 Pfam Protein kinase domain 162 386 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa08g0301 883 SUPERFAMILY Protein kinase-like (PK-like) 144 493 IPR011009 -
Bisa08g0301 883 PANTHER - 114 457 - -
Bisa08g0301 883 SMART serkin_6 160 474 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa08g0301 883 Pfam Protein tyrosine and serine/threonine kinase 567 842 IPR001245 GO:0004672|GO:0006468
Bisa08g0301 883 Gene3D Phosphorylase Kinase; domain 1 521 639 - -
Bisa08g0301 883 ProSiteProfiles Protein kinase domain profile. 160 474 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa08g0301 883 FunFam Receptor like protein kinase S.2 238 461 - -
Bisa08g0301 883 ProSitePatterns Protein kinases ATP-binding region signature. 166 189 IPR017441 GO:0005524
Bisa08g0301 883 Gene3D Transferase(Phosphotransferase) domain 1 645 869 - -
Bisa08g0301 883 Gene3D Transferase(Phosphotransferase) domain 1 238 464 - -
Bisa08g0301 883 SUPERFAMILY Protein kinase-like (PK-like) 541 845 IPR011009 -
Bisa08g0301 883 CDD STKc_IRAK 574 846 - -
Bisa08g0301 883 Gene3D Phosphorylase Kinase; domain 1 132 237 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa08g0301 Bisa-ChrBisa08 5415238 5417889 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa08g0301 553 847 Receptor kinase-like Gene Family AT3G53810 36.789 7.94e-54 197
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Bisa08g0301 PK_Tyr_Ser-Thr 5.9e-31 CL0016