Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa08g0286 ATGCCAATATCAAATTCTTGTGCTGTTATGTCAGATTCTGATTTCATCACACCAAGATTGGTTCTGAAGAAGGTTTTAGCCAGACCTCTCCAGGAAGGCAATGGAACTGTTCTTACAGGCATTGGGAGTGAGTTGGAGCACTATTTGGATCCATTTGTGACGTTATTTCACTTCTCAGTGACTCCGCCTGGAGGATTTCCTGACCATCCACACAGAGGTTTTGAGACTGTCACCTATGTGCTCGAGGGAGCCATAAACTACGAGGATTTTGCTGGAAATAAAGGTACTGTAAGAAGTGGTGATGTTCAGTGGATGACCGCAGGAAGAGGAATTGTTCACTCTGAAATGCCTGCAGGAGAAGGAACCCATACAGCACTCCAACTATGGATCAATTTATCATCCAAACAAAAAATGATTGAACCAAGGTACAAAGAAGTGGAAAACAAGGAGATAGCAAGAGTAAGAAAAGAAGGAGCAGAAATTAGGGTTTTGGCAGGAGAAGCAGAGGGAGTGAGATCTTCATACCACACCGAAACCCCATTGCTGCTTCTGGACATCACAGTGAAGCCCAGATCGGAGCTTCATCAGAGAATACCACAGGCTTCATGGAACTGCTTCGTTTACGTGGTTGAAGGAGAAGGTGTGTTTGGGTCAGAAGCAGCAGAGCCAATGGGGGCCCACCACGTGGCGGTGCTGGGACGAGGAGAAGGCGTGAGTGTGTGGAACAGGTCGTCTGACGTGGCACTGAGGTTTGTGATTGGCGCAGGGAAGCCATTGGAGGAGGGTGTGAAAAGGTGTGGCCCCTTTGTGATGAACAGTGAAAATGAGATTCACGCGAGTTTGGAGGATTATCGTCAGTTCAAGAATGGGTTTGAGATGGCTAAGTCTTGGCGGTCTCATCAGTAA 906 0.4724 MPISNSCAVMSDSDFITPRLVLKKVLARPLQEGNGTVLTGIGSELEHYLDPFVTLFHFSVTPPGGFPDHPHRGFETVTYVLEGAINYEDFAGNKGTVRSGDVQWMTAGRGIVHSEMPAGEGTHTALQLWINLSSKQKMIEPRYKEVENKEIARVRKEGAEIRVLAGEAEGVRSSYHTETPLLLLDITVKPRSELHQRIPQASWNCFVYVVEGEGVFGSEAAEPMGAHHVAVLGRGEGVSVWNRSSDVALRFVIGAGKPLEEGVKRCGPFVMNSENEIHASLEDYRQFKNGFEMAKSWRSHQ 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa08g0286 301 CDD cupin_pirin_N 49 132 - -
Bisa08g0286 301 SUPERFAMILY RmlC-like cupins 42 299 IPR011051 -
Bisa08g0286 301 Gene3D Jelly Rolls 152 259 IPR014710 -
Bisa08g0286 301 PANTHER PIRIN-RELATED 13 300 IPR012093 -
Bisa08g0286 301 Pfam Pirin C-terminal cupin domain 184 290 IPR008778 -
Bisa08g0286 301 CDD cupin_pirin_C 180 258 - -
Bisa08g0286 301 PIRSF Pirin 17 298 IPR012093 -
Bisa08g0286 301 Gene3D Jelly Rolls 41 285 IPR014710 -
Bisa08g0286 301 Pfam Pirin 63 130 IPR003829 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa08g0286 Bisa-ChrBisa08 5164730 5168611 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa08g0286 18 295 Calmodulin-binding Proteins AT3G59220 53.571 9.68e-107 310