Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa08g0281 ATGTACCACTCTTCTTCCTCTTCGTCCTCTCAAAAATCCATATCTCAGAGCGGGTTGACCCGCTACGGTTCCGCCCCGGGCTCACTCATAACCAACGCTGTCGATGCGGTCATCGGAGGAGCCGACCGCGAATTCTCCGCCTCCGTCGCCGGATCGCGCCCTCCGGTGGCTCATTTCTTCTCCGGCGACTCATCCGAGTCCACCTGCAAAGTCAACTCGACCTCCTCCGATCCGAAGGAGCAGCAGCCCAGAGCCGGATTGCAGAGGTCGTACGGACTCCACGACGGCGCTACCCTCGGCTTCGGTGGCTCTTCTTCTTCTTCTTCTTCTTCGGCTTTGGTTCGTCAGAGAAGCTCGCCAGCTGGGTTCCTCAGCCATCTCACGACTGCTACTCAAGCTGACAATGCAACAGGCTTCTCAATTTCAAGGGGCAGTGGAAGCTACAGCTCACAAGGTGTCTCCAGTAGTGGCCATGGAGTATCAAGGTTGAAATCTCAATTGAGCTTCACAGGGCAAGAATCTCTTTCTCAGATATCAGAGGTGAGTGAAAATGTCGTCGATGGCATCAGTTCTGATAACGGCCACCATAGAGCTACACATTCTTATGCTACAACCAGCTTTGGAATGGACACGTGGGATAATTCAAACTCCATTGTGTTTTCTGCTCCACCTAGTAAACGTGCTAAGAATATTGATGGAGACATTCTAAACTGTCTTAATGCCTTGGAATCTCAGTTTAGTCTCCCACAAACAACTCTGGAAATGGCAACAGTGGAGAAGCTACTCCATATTCCTGAAGATTCTGTGCCTTGTAAAATTCGTGCTAAGCGAGGCTGTGCTACTCATCCAAGAAGCATTGCAGAACGGGAGAGAAGAACTAGAATAAGTGGGAAGCTGAAGAAATTACAAGACCTAGTACCTAATATGGACAAGCAAACAAGCTATGCAGACATGCTGGATTTGGCTGTTCAACATATCAAAGGCCTACAAACTCAAGTTCAGAAGCTCCACAAAGAACTCGAGAGTTGCACCTGTGGATGTAAACAGGGATCATAG 1056 0.4943 MYHSSSSSSSQKSISQSGLTRYGSAPGSLITNAVDAVIGGADREFSASVAGSRPPVAHFFSGDSSESTCKVNSTSSDPKEQQPRAGLQRSYGLHDGATLGFGGSSSSSSSSALVRQRSSPAGFLSHLTTATQADNATGFSISRGSGSYSSQGVSSSGHGVSRLKSQLSFTGQESLSQISEVSENVVDGISSDNGHHRATHSYATTSFGMDTWDNSNSIVFSAPPSKRAKNIDGDILNCLNALESQFSLPQTTLEMATVEKLLHIPEDSVPCKIRAKRGCATHPRSIAERERRTRISGKLKKLQDLVPNMDKQTSYADMLDLAVQHIKGLQTQVQKLHKELESCTCGCKQGS 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa08g0281 351 Gene3D - 280 349 IPR036638 GO:0046983
Bisa08g0281 351 CDD bHLH_AtbHLH_like 284 336 IPR045239 -
Bisa08g0281 351 Pfam Helix-loop-helix DNA-binding domain 284 330 IPR011598 GO:0046983
Bisa08g0281 351 MobiDBLite consensus disorder prediction 1 27 - -
Bisa08g0281 351 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 48 342 - -
Bisa08g0281 351 FunFam Transcription factor bHLH130 family 280 349 - -
Bisa08g0281 351 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 282 344 IPR036638 GO:0046983
Bisa08g0281 351 SMART finulus 285 335 IPR011598 GO:0046983
Bisa08g0281 351 MobiDBLite consensus disorder prediction 61 83 - -
Bisa08g0281 351 MobiDBLite consensus disorder prediction 58 88 - -
Bisa08g0281 351 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 279 329 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa08g0281 Bisa-ChrBisa08 5089550 5095870 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa08g0281 18 349 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G05805 48.907 3.37e-97 291
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Bisa08g0281 HLH 5.4e-09 No_clan