Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa08g0260 ATGCAATCCTTATCAACTTCGAAGCTTGAAAATGCAGCATGTACAACAATAGCAGGGTTTCTTCTGCCGGGCACACAACAGATTATTCGGCTGCTTGGACAGCTTTTTCCTGCGACACTCCAAAACATGGCGAACCCTATGGCTAGGTCCTTCTCGCAAGTGGCGGCAACGGAGGAAGCGGCACCCCCTCTTAGAGTGGTCCAGATGGAAGGGCTGGTTATCTTAAAGATAATTAAGCATTGTAAGGACCACTCACCTACTTTAGTTACTGGACAACTTCTTGGGCTGGATGTTGGCAGTGATCTTGAAGTTACTAACTGTTTCCCCTTTCCGATCAGGGAGGAGGATGAGGAAATTGAAGCTGATGGTGCTAATTACCAGCTTGAAATGATGAGATGCTTGAGAGAAGTTAATGTTGACAATAATACTGTTGGATGGTATCAGTCTACACTGCTTGGTTCCTTTCAGACTGTGGAGCTAATTGAAACTTTCATGAATTACCAGGAGAACATAAGACGTTGTGTTTGCATAATATATGATCCATCAAGGTCTGATCAAGGTGTCCTAGCTCTGAAGGCCTTGAAGCTTTCCGACTCATTCATGGAACTATATCGCAGCAATAATATTACTGGAGAGAAACTGAGGGAGAGAAACTTGTCATGGGTGGATATCTTCGAGGAGATACCAATCAAAGTTTCAAATTCTGCCCTTATCAGTGCCTTTATGACAGAGTTGGAACCTGATACACCAGTAACCCAGTGCGACTATGATCGTCTCCAATTGTCAACTAGTTCATTAATGGAGAGGAATATGGAATTTTTGATTGAATGCATGGATGATTTGTCAATAGAGCAGCAGAAGTTCCAATTTTACACCCGGAGCTTGTCCCGCCAACAGGCCCAGCAGCAAGCATGGCTTCAAAAGAGAAGGGCGGAGAACATGGCACGTAAGGCTGCTGGAGAGGAGCCTTTGCCTGAGGAAGATCCATCAAACCCCGTCTTCAAGCCACTCCCTGAGCCATCACGGTTGGACAGCTTCCTTATAACAAATCAAATTGCCAACTACTGCAACCAAATTAACGGGGTGTCAGGGCAGAGCTTTAACAGACTTTATTTGATGAAGGCTTTGCATGACGATTGA 1140 0.4482 MQSLSTSKLENAACTTIAGFLLPGTQQIIRLLGQLFPATLQNMANPMARSFSQVAATEEAAPPLRVVQMEGLVILKIIKHCKDHSPTLVTGQLLGLDVGSDLEVTNCFPFPIREEDEEIEADGANYQLEMMRCLREVNVDNNTVGWYQSTLLGSFQTVELIETFMNYQENIRRCVCIIYDPSRSDQGVLALKALKLSDSFMELYRSNNITGEKLRERNLSWVDIFEEIPIKVSNSALISAFMTELEPDTPVTQCDYDRLQLSTSSLMERNMEFLIECMDDLSIEQQKFQFYTRSLSRQQAQQQAWLQKRRAENMARKAAGEEPLPEEDPSNPVFKPLPEPSRLDSFLITNQIANYCNQINGVSGQSFNRLYLMKALHDD 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa08g0260 379 ProSiteProfiles MPN domain profile. 67 200 IPR037518 -
Bisa08g0260 379 MobiDBLite consensus disorder prediction 311 336 - -
Bisa08g0260 379 SMART pad1_6 66 199 IPR000555 GO:0005515|GO:0008233|GO:0008237
Bisa08g0260 379 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 -RELATED 58 363 - -
Bisa08g0260 379 FunFam Eukaryotic translation initiation factor 3 subunit H 46 255 - -
Bisa08g0260 379 CDD MPN_eIF3h 65 328 IPR027524 GO:0003743|GO:0005737|GO:0005852
Bisa08g0260 379 Gene3D Cytidine Deaminase, domain 2 38 255 - -
Bisa08g0260 379 Pfam C-terminal region of eIF3h 186 377 IPR045810 -
Bisa08g0260 379 Pfam JAB1/Mov34/MPN/PAD-1 ubiquitin protease 65 168 IPR000555 GO:0005515|GO:0008233|GO:0008237
Bisa08g0260 379 Hamap Eukaryotic translation initiation factor 3 subunit H [EIF3H]. 62 379 IPR027524 GO:0003743|GO:0005737|GO:0005852
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa08g0260 130 379 Eukaryotic Initiation Factors Gene Family AT1G10840 82.800 2.08e-155 436