Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa08g0245 ATGGCTTATCCCAAAGTTCTCATGGTCGCAGAGAAGCCTAGCATCGCTCAATCCATTGCCTCTGTTCTCTCCCATGGTCAGATGTGTACAAGAAAAGGAAGCACAGATATTCATGAATTTGAGGGGAAATTTCTTGGATCGCATGCACACTTTAAAGTAACATCGGTTATTGGGCATGTATTTAGTGTAGATTTTCCTCCTAAATATCAGGATTGGACAGCCACAGATCCATTAGATCTTTTTCAAGCCCCAGTTGTGAAGAATGAATCAAACCCAAGGGCACATATTTGTAGACATCTAAATCAAGAAGCTCGTGGATGTCGTTATCTGGTATTGTGGTTAGACTGTGATCGTGAAGGAGAAAATATATGTTTTGAAGTTATAGAGTCAACTAGCTTTAATGTAAATGAAGCTCGAAAAAGGATTTATCGTGCACGTTTTTCTGCTGTTACCGAGAAGGATATTCTGAAGGCTCTTGACAACCTTGTGGAACCCAACAGAGATGAGTCACTGGCTGTGGATGCTAGGCAGGAGATAGATTTAAAAGTTGGAGTTGCATTCACTCGATTCCAGACAAGTTTTTTCCAGGGAAAATATGGGAACCTAGATGCCAGAGTTATATCCTATGGACCATGTCAAACTCCTACCTTGGGCTTTTGTGTGCAGCGATATTTGCAAATAAATACCTTCAAGCCAGAAAAGTTTTGGACCTTGCACCCTTACATAATACACAATGGCTATGAAATTCAGCTAGAATGGGACCGTGGCAGATTATTTGACATAAATGTTGCTATTATGTTTCAGAAGGTAGTAACTGAAGGTGGACCTCTGGAAGTTACCAATGTATCGGAAGAACAGAAAACCAATAGTCGGCCTGTTGGTCTGAATACAGTCAATCTTCTGAAGGTTGCTTCCAGTGCTTTAGGATTTGGACCTCAAATGGCTATGCAACTAGCTGAGCGCTTGTATACTCAAGGTTTCATCAGCTATCCACGCACAGAAAGCACCGCATATCCGCCTTCATTTGACTTTCAGGGTGTCCTCTCTGCACAAGCAAATAATCCAACCTGGGGTCAATATGTACAGGGGCTACTTGCCAATGGTTACCACAAGCCTCGATTAGGAACGGACGTAGGTGACCATCCTCCTATCACTCCAATGCGGTCAGCGTCTGAGGATATGGTAGGCAACGATGCTTGGAAGTTGTACCAATATGTCTGTCAACACTTCATGGGGACAGTGTCCCCAGATTGCAAATATGTAAGGAGAAAGGTAGAATTTTCGATTGGTGGGGAGTTCTTCCATTGTACAGGGAAGCATGTAACTGTCAAAGGGTTTACTTCTATTATGCCTTGGTTGGCAGTAAATGATAAAAATATTCCATCCTTCACAAAAGGGCAGAAAATTGATGTGTCAAAAGTGGAGCTATACGAGGGGACTACCACACCTCCAGATTATCTTAGTGAAAGTGAGCTGATTTCCCTGATGGAGAAGAATGGGATAGGAACAGATGCATCAATTCCTGTACATATCAACAACATCTGTGAGCGGAATTATGTGCAGGTACAAGCGGACAGGAAGCTTGTCCCAACCCCCTTAGGTGTAACTTTAATAAGAGGTTATCAATCAATTGATCCAGACCTCTGCCTACCTGATATCCGTAGCTTCATTGAGCAGCAAATTACTCTTATTGCTAAGGGTCAGATAGATCATTATCGTGTTGTGCAGCATGTACTACTACAATTCAAGCAGAAATTTAGTTACTTTGTTAAGAAGATTGAAAATATGGATGCATTATTCGAAGCACAATTTTCTGCACTTACTGATTCAGGGCGCACTCTTAGTAAATGTGGTAAATGCTTGCGATATATGAAGTACATTTCTGCTCAGCCATCACGTTTGTATTGTAATACATGTGAGGAGGTTTATTATCTTCCACAAAAGGGGACAATTAAGCTGTACAAGGAACTGGCTTGTCCATTGGACAACTTTGAGCTTCTGCTCTGCTCCATGCCTGGCCCAGAGGGAAAAACATTCCCACTCTGCCCGTACTGCTACAGCAATCCTCCGTTTGAAGGTATCGAAGCACTCATCAATACAGCTAAAGTCGGTACTTCGAGCAAGCTAGGGAAAGGAGCCGGCATGCCATGCATCCTCTGCCCCCACCCCACTTGCCCAAACTCTCTGGTTTCACAAGGGGTCTGTGCTTGCCCGGAGTGCAGTGGGACACTTGTCTTAGACCCGGTAAGTGCTCCCAAGTGGCGACTTTATTGCAATATGTGCAACTGCCTTGTTCTTCTTCCTCAAGGTGCTCACAGAATCTCCACAACTCAAGAACAATGCCTTGAATGTGATTCAAAAATCATAGAAGTTGACTTCAACAAGAAAACAACTCCTCTGGAGAATGGAGCTACCTTGCACCGTGGTTGCGTTATTTGTGACGAGTTGCTTCATTCCCTTGTGGAGATGAAACATGGGAAGAGTTTCAGATCAAGAGGAAGAGGGAGGGGAAGGGGAAGGGGAGGCGGGCACTGGGGAAGAGGACGTGGTGCGAAAATGAGTTTTCGAGATTTCTGA 2577 0.4366 MAYPKVLMVAEKPSIAQSIASVLSHGQMCTRKGSTDIHEFEGKFLGSHAHFKVTSVIGHVFSVDFPPKYQDWTATDPLDLFQAPVVKNESNPRAHICRHLNQEARGCRYLVLWLDCDREGENICFEVIESTSFNVNEARKRIYRARFSAVTEKDILKALDNLVEPNRDESLAVDARQEIDLKVGVAFTRFQTSFFQGKYGNLDARVISYGPCQTPTLGFCVQRYLQINTFKPEKFWTLHPYIIHNGYEIQLEWDRGRLFDINVAIMFQKVVTEGGPLEVTNVSEEQKTNSRPVGLNTVNLLKVASSALGFGPQMAMQLAERLYTQGFISYPRTESTAYPPSFDFQGVLSAQANNPTWGQYVQGLLANGYHKPRLGTDVGDHPPITPMRSASEDMVGNDAWKLYQYVCQHFMGTVSPDCKYVRRKVEFSIGGEFFHCTGKHVTVKGFTSIMPWLAVNDKNIPSFTKGQKIDVSKVELYEGTTTPPDYLSESELISLMEKNGIGTDASIPVHINNICERNYVQVQADRKLVPTPLGVTLIRGYQSIDPDLCLPDIRSFIEQQITLIAKGQIDHYRVVQHVLLQFKQKFSYFVKKIENMDALFEAQFSALTDSGRTLSKCGKCLRYMKYISAQPSRLYCNTCEEVYYLPQKGTIKLYKELACPLDNFELLLCSMPGPEGKTFPLCPYCYSNPPFEGIEALINTAKVGTSSKLGKGAGMPCILCPHPTCPNSLVSQGVCACPECSGTLVLDPVSAPKWRLYCNMCNCLVLLPQGAHRISTTQEQCLECDSKIIEVDFNKKTTPLENGATLHRGCVICDELLHSLVEMKHGKSFRSRGRGRGRGRGGGHWGRGRGAKMSFRDF 858
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa08g0245 858 MobiDBLite consensus disorder prediction 829 845 - -
Bisa08g0245 858 Gene3D Topoisomerase I, domain 3 231 484 IPR013825 -
Bisa08g0245 858 FunFam DNA topoisomerase 3 165 - -
Bisa08g0245 858 CDD TOP1Ac 172 586 IPR013497 GO:0003677|GO:0003916|GO:0006265
Bisa08g0245 858 Gene3D Topoisomerase I, domain 2 172 586 IPR013824 -
Bisa08g0245 858 Pfam Toprim domain 6 149 IPR006171 -
Bisa08g0245 858 Pfam DNA topoisomerase 165 575 IPR013497 GO:0003677|GO:0003916|GO:0006265
Bisa08g0245 858 FunFam DNA topoisomerase 291 416 - -
Bisa08g0245 858 Gene3D Topoisomerase I, domain 4 291 416 IPR013826 -
Bisa08g0245 858 ProSiteProfiles Toprim domain profile. 5 148 IPR006171 -
Bisa08g0245 858 SMART topIban2 141 237 IPR003601 GO:0003677|GO:0003916|GO:0006265
Bisa08g0245 858 MobiDBLite consensus disorder prediction 828 858 - -
Bisa08g0245 858 CDD TOPRIM_TopoIA_TopoIII 5 162 IPR034144 -
Bisa08g0245 858 PANTHER PROKARYOTIC DNA TOPOISOMERASE 5 825 IPR000380 GO:0003677|GO:0003917|GO:0006265
Bisa08g0245 858 SUPERFAMILY Prokaryotic type I DNA topoisomerase 5 626 IPR023405 -
Bisa08g0245 858 Gene3D - 1 165 - -
Bisa08g0245 858 ProSitePatterns Prokaryotic DNA topoisomerase I active site. 320 334 IPR023406 GO:0003917
Bisa08g0245 858 SMART toprim5 5 136 IPR006171 -
Bisa08g0245 858 SMART topIaneu2 283 538 IPR003602 GO:0003677|GO:0003916|GO:0006265
Bisa08g0245 858 PRINTS Prokaryotic DNA topoisomerase I signature 500 514 IPR013497 GO:0003677|GO:0003916|GO:0006265
Bisa08g0245 858 PRINTS Prokaryotic DNA topoisomerase I signature 110 123 IPR013497 GO:0003677|GO:0003916|GO:0006265
Bisa08g0245 858 PRINTS Prokaryotic DNA topoisomerase I signature 402 418 IPR013497 GO:0003677|GO:0003916|GO:0006265
Bisa08g0245 858 PRINTS Prokaryotic DNA topoisomerase I signature 207 225 IPR013497 GO:0003677|GO:0003916|GO:0006265
Bisa08g0245 858 PRINTS Prokaryotic DNA topoisomerase I signature 325 334 IPR013497 GO:0003677|GO:0003916|GO:0006265
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa08g0245 Bisa-ChrBisa08 4554555 4564716 Dispersed