Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa08g0235 ATGAAATATTCGGTAGGTATCTTTCGTCTTTCCCGTAGTGAGATTAATGTAGCTGGGAAAAAGAAGGAAGAAGGAAATGCCTATTTCAAGGCTGGTAAATATGAAAAAGCATCAAAGAGATATAAAAAGCTCAAAGACCACAAGGAGACAGCAAAAGTATGCACAAAGGTTTTGGAACTTGATAGTGGGAATGTAAAAGCTCTATACCGAAGGGCACAAGCAAATGTACAACTTGTGGAATTGGATGTTGCTGAAATGGACATAAAGAAAGCCCTTGAAATTGAGCCAGACAATATGTATGCTTTTTAG 309 0.3754 MKYSVGIFRLSRSEINVAGKKKEEGNAYFKAGKYEKASKRYKKLKDHKETAKVCTKVLELDSGNVKALYRRAQANVQLVELDVAEMDIKKALEIEPDNMYAF 102
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa08g0235 102 PANTHER ARYL HYDROCARBON RECEPTOR INTERACTING PROTEIN RELATED 43 98 IPR039663 -
Bisa08g0235 102 SUPERFAMILY TPR-like 18 101 IPR011990 GO:0005515
Bisa08g0235 102 SMART tpr_5 18 51 IPR019734 GO:0005515
Bisa08g0235 102 SMART tpr_5 65 98 IPR019734 GO:0005515
Bisa08g0235 102 Gene3D Tetratricopeptide repeat domain 43 101 IPR011990 GO:0005515
Bisa08g0235 102 Pfam Tetratricopeptide repeat 66 98 IPR019734 GO:0005515
Bisa08g0235 102 ProSiteProfiles TPR repeat profile. 65 98 IPR019734 GO:0005515
Bisa08g0235 102 Gene3D Tetratricopeptide repeat domain 10 42 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa08g0235 Bisa-ChrBisa08 4447329 4448718 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa08g0235 11 98 Calmodulin-binding Proteins AT5G48570 48.387 6.18e-28 103