Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa08g0226 ATGGGAATCTCCTGGATATCAATGAAGACGCCAGAGTTTAGCACAATCATCAAATCCCTCACAGACTTTCTATTACAGAAAATCAAATTCATCGTTATGATGCCACTTTATTATCTCTCTCCATCACAACAAGAACCTCCTCCTCCTCCTTCTGAAAGTTCTGGCCATGTCCTCATACTGGATGGCTTGTCATCACCAACCCTAGTCCCACTTCATCTTCTGACTTCACTCATCAAACAGAAGCTTCCTGTGACAGAGTTCAGCAAGTTCTTGGAGCGATCAAAAGGATCAGAAGAAGAGAAAGAAGGAATAGAATGTTGTGTGTGCTTGAACAGATTTGAGGGCAGCCAGATGATCAGAGAGACGTCAAATTGTGGCCACATATTTCACAGACAGTGCTTGGATAGATGGGTGGATCACAACCAAGTCACTTGCCCTTTGTGCAGAAGTATGCTATTTCCAGGTCTTCTGGGACAAAACACTCTCCACCACTACCAGTGA 501 0.4391 MGISWISMKTPEFSTIIKSLTDFLLQKIKFIVMMPLYYLSPSQQEPPPPPSESSGHVLILDGLSSPTLVPLHLLTSLIKQKLPVTEFSKFLERSKGSEEEKEGIECCVCLNRFEGSQMIRETSNCGHIFHRQCLDRWVDHNQVTCPLCRSMLFPGLLGQNTLHHYQ 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa08g0226 166 SMART ring_2 106 148 IPR001841 -
Bisa08g0226 166 ProSiteProfiles Zinc finger RING-type profile. 106 149 IPR001841 -
Bisa08g0226 166 PANTHER RING ZINC FINGER PROTEIN-RELATED 72 155 - -
Bisa08g0226 166 SUPERFAMILY RING/U-box 89 155 - -
Bisa08g0226 166 Pfam Ring finger domain 105 149 IPR001841 -
Bisa08g0226 166 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 79 153 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa08g0226 Bisa-ChrBisa08 4294611 4295111 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa08g0226 78 162 C3H Transcription Factor Family AT3G43430 39.785 6.42e-18 74.7