Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa08g0220 ATGGGTCATCCCAAGCTCAAAACCCTAGTTTCTCTCTCTATACTCCTGCTCTCTCTCCTCTCCTCCGCCATTGCCGACGATGCAATTTACATGTCCAAGCTCGCCAAAGCCCTCTCCAATCCCTCCGATTGGTCCGACAATACTCCTTTCTGCAAATGGACCGGCGTCAATTGCGACACCTCCGGCCGGGTCACCTCCATCAACCTTGCTTCCAAGTCAATTTCCGGTACTCTTCCTTCCGATCTCAACTCTCTCTCTCAGCTCACTTCCCTCTCTCTTCAGAACAATGCTCTCTCGGGCGCTCTCCCATCTTTTGCGAATCTCTCTTTGCTTCAAACTGTGTTCCTTTATTACAACAATTTCACCTCTGTCCCTCCCGGTTGTTTCCAAGGGCTAACCGGCCTGCGGACCCTTAGCTTGAGCAACAATATCAACCTTAAACCCTGGACGTTTCCGACCGATTTGACTCATTCTTCTAACCTGGGCACTCTTAAGATCGGAAATGCTAATATCCTGGGTTCCTTGCCGGATATTTTCGATTCCTTCCCGAGCTTGCAGAATGTTCGTCTCTCTTACAACAACCTCACCGGTGGGTTGCCTAAAACGTTTGGGGGATCTGGAATTATGAACTTATGGCTTAACAATCAACTCAACGGGTTATCGGGTACAATCGACGTGTTATCATCAATGGAGCAGTTGTCTCAAGTTCGGCTTCATAAGAACCAGTTCACAGGTCTCATTCCCGACTTGTCCAAGTGCAAGAGTTTGTTTGATTTACAGCTTCGGGACAACCAGTTAACTGGTGTAGTTACACCTTCTTTGATGGCTCTCTCAAGCTTGCAGACCGTTTCTTTGGACAACAATGAGCTGCAGGGGCCGGTTCCCGAGTTTGGCAGTGGCGTGAAAGTTACCCTTGACGGGAATAACTTCTGTAAAAGTAGTCCGGGAGCTTGCGATGCGCGGATTACGACGTTGCTTGAGATTGCTGCAGCATTGGGGTATCCGTTTAGGTTGGCTGACGCGTGGAAAGATAATGACCCTTGTAATACTTGGAGTTTTATTGTGTGTACAAATGGGAAGATCACCACGGTGAATATGGCTAAGCAGAATTTCCAAGGAACAATCTCCCCCGCATTTGGGAATCTAACAGATTTAAGGAACTTGTATCTGAATGGTAATAACTTGAGTGGTTCAATACCAGAGAGCTTGACAACTTTGCCCGAACTCGTCGTTCTTGATGTATCTAGCAACAATCTATCTGGAGAGGTTCCGAAATTTTCGTCAAAGTTGAAGCTGACAACTACAGGTAATCTTCTGCTTGGGAAAACTCCCAGCTCTGGAGGTGGAAGAAATGGAAGTAGTCATACTACGGGTATTTCATTGTCACGTGGTTGGATCGCAGGTATAGTCATCATTGGCCTACTTTCTGTGGCAGTGGCATTATATGTCTCCTGCAAGTGTTTTGCTCAAACTCGTCGTAAGAAATTTGTAAGGGTTAATGATCCTGAAAATGGAAATGGTTGTCCTAGAGTTCCCAGTGAGTCGCATAGCCAAGGCAGTGGTGATCCTAGTGACCTTCATGTTTCTGGGGGTGGCACTGCTAAATTTTCAATTCAAGATCTTCGTCAAGTAACAAATAACTTCAGTGAAGATAACTTTTTGGGTAAGGGAGGATTTGGAGGAGTTTATAAAGGGGAATTGCATGATGGAACAAAAATTGCTGTGAAGAGAATGAAATCTGCTTCGAGGGGAAGCAAAAGATTGAAAGGATTCCAAGCAGAGATTGAGGCCCTCAGTACAGTCAGTCATAGGAATTTGGTTGCCCTTAAAGGATATTGCATTAATGGCAATGAAAGGCATTTGGTGTATGAGTATATGCCTCAAGGGACACTAGAACAACATCTGTTTGAATGGCGTGAGAAAGGGTGGGCTCCTCTGACTTGCAAGCAAAGGGTAGCAATTGCTTTGGATGTAGCACGGGGAGTGGAATACTTACACAGCTTAGCTCAGCAAAGCTTCATTCACAGAGACTTAAAACCCGCAAACATACTTCTAGGTGATGACATGAGAGCGAAGGTTGGAGATTTTGGGTTGGTTAAAAATTCACGTGACGGGAAGTGTTCTTTTGAGTCACGGCTGGCTGGAACTTTTGGGTATTTTGCACCTGAATATGCAGCTACTGGTATAGTGACGACGAAAATAGATGTGTATGCATTTGGGGTTGTTTTGATGGAACTGATCACTGGTAGAAGGGCTTTGGAAGATATTGTCCCAGATGGAAGATCTCAATTGGTGCCATGGTTCCGTAGGGTACTGTCCAACAAGGAGAACATCCAAAATGCCATCGATCAAACTCTCGACCCCGACGACGAGACAATGGAGAGCATATACAAAGTGGCTGAGCTTGCATGGCGTTGCACTGCCCGTGAGGCAGACCAAAGGCCAGTCATGGGCTATGCAGTGAATGTGCTGGCTCCTCTTGTGGAGCAGTGGAAACCTACTAACCATGAAGAAGAAGACAGTTATGGCACTGACCACATGAGCCTGCCCCAAGCCCTTCAAAGATGGCAAGCCAATGAAGGCACCTCTGCAATGTTTATTGAGATGGGATCAGGATCTTCGGCCTGCCGCATAGATTTGGATCCCCTCAAGGGTCCTTGA 2661 0.4637 MGHPKLKTLVSLSILLLSLLSSAIADDAIYMSKLAKALSNPSDWSDNTPFCKWTGVNCDTSGRVTSINLASKSISGTLPSDLNSLSQLTSLSLQNNALSGALPSFANLSLLQTVFLYYNNFTSVPPGCFQGLTGLRTLSLSNNINLKPWTFPTDLTHSSNLGTLKIGNANILGSLPDIFDSFPSLQNVRLSYNNLTGGLPKTFGGSGIMNLWLNNQLNGLSGTIDVLSSMEQLSQVRLHKNQFTGLIPDLSKCKSLFDLQLRDNQLTGVVTPSLMALSSLQTVSLDNNELQGPVPEFGSGVKVTLDGNNFCKSSPGACDARITTLLEIAAALGYPFRLADAWKDNDPCNTWSFIVCTNGKITTVNMAKQNFQGTISPAFGNLTDLRNLYLNGNNLSGSIPESLTTLPELVVLDVSSNNLSGEVPKFSSKLKLTTTGNLLLGKTPSSGGGRNGSSHTTGISLSRGWIAGIVIIGLLSVAVALYVSCKCFAQTRRKKFVRVNDPENGNGCPRVPSESHSQGSGDPSDLHVSGGGTAKFSIQDLRQVTNNFSEDNFLGKGGFGGVYKGELHDGTKIAVKRMKSASRGSKRLKGFQAEIEALSTVSHRNLVALKGYCINGNERHLVYEYMPQGTLEQHLFEWREKGWAPLTCKQRVAIALDVARGVEYLHSLAQQSFIHRDLKPANILLGDDMRAKVGDFGLVKNSRDGKCSFESRLAGTFGYFAPEYAATGIVTTKIDVYAFGVVLMELITGRRALEDIVPDGRSQLVPWFRRVLSNKENIQNAIDQTLDPDDETMESIYKVAELAWRCTAREADQRPVMGYAVNVLAPLVEQWKPTNHEEEDSYGTDHMSLPQALQRWQANEGTSAMFIEMGSGSSACRIDLDPLKGP 886
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa08g0220 886 PANTHER OSJNBA0070M12.3 PROTEIN 12 862 - -
Bisa08g0220 886 Gene3D Ribonuclease Inhibitor 319 443 IPR032675 -
Bisa08g0220 886 ProSiteProfiles Protein kinase domain profile. 548 828 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa08g0220 886 FunFam Somatic embryogenesis receptor kinase 1 520 625 - -
Bisa08g0220 886 CDD STKc_IRAK 554 827 - -
Bisa08g0220 886 ProSitePatterns Protein kinases ATP-binding region signature. 554 576 IPR017441 GO:0005524
Bisa08g0220 886 Pfam Leucine rich repeat 86 143 IPR001611 GO:0005515
Bisa08g0220 886 Pfam Leucine rich repeat 363 419 IPR001611 GO:0005515
Bisa08g0220 886 Pfam Leucine rich repeat N-terminal domain 38 59 IPR013210 -
Bisa08g0220 886 Pfam Leucine rich repeat N-terminal domain 323 356 IPR013210 -
Bisa08g0220 886 FunFam Receptor-like kinase TMK4 25 316 - -
Bisa08g0220 886 MobiDBLite consensus disorder prediction 499 527 - -
Bisa08g0220 886 Gene3D Transferase(Phosphotransferase) domain 1 626 849 - -
Bisa08g0220 886 MobiDBLite consensus disorder prediction 510 524 - -
Bisa08g0220 886 Gene3D Ribonuclease Inhibitor 25 318 IPR032675 -
Bisa08g0220 886 SMART LRR_typ_2 230 253 IPR003591 -
Bisa08g0220 886 SMART LRR_typ_2 85 107 IPR003591 -
Bisa08g0220 886 SMART LRR_typ_2 277 300 IPR003591 -
Bisa08g0220 886 SMART LRR_typ_2 182 205 IPR003591 -
Bisa08g0220 886 SMART LRR_typ_2 382 406 IPR003591 -
Bisa08g0220 886 SMART LRR_typ_2 108 131 IPR003591 -
Bisa08g0220 886 SMART serkin_6 548 817 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa08g0220 886 SUPERFAMILY Protein kinase-like (PK-like) 524 824 IPR011009 -
Bisa08g0220 886 Gene3D Phosphorylase Kinase; domain 1 515 625 - -
Bisa08g0220 886 FunFam Leucine-rich repeat receptor-like kinase 320 443 - -
Bisa08g0220 886 Pfam Protein tyrosine and serine/threonine kinase 552 818 IPR001245 GO:0004672|GO:0006468
Bisa08g0220 886 FunFam PTI1-like tyrosine-protein kinase 3 626 840 - -
Bisa08g0220 886 ProSitePatterns Serine/Threonine protein kinases active-site signature. 673 685 IPR008271 GO:0004672|GO:0006468
Bisa08g0220 886 SUPERFAMILY L domain-like 26 434 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa08g0220 Bisa-ChrBisa08 4209028 4212494 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa08g0220 32 848 Receptor kinase-like Gene Family AT5G49660 28.785 6.72e-86 293
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IX Bisa08g0220 PK_Tyr_Ser-Thr 1.8e-44 CL0016