Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa08g0219 ATGTCTCATCCCAACCTCAAAATCCTAGTTCCTGTTTCTATACTCCTCCTGTTTCTCCCCTCCTTCGCCATTGCCGACGATACAGCTTACATGTCCAAGCTCGCCAAAGCCCTTTTCAATCCCTCTGATTGGTCCGACGAGACTCCGTTCTGTAAATGGACCGGCGTCAAATGCGACACCTCCGGCCGCGTCACCTCCATCAACCTTGCTTCCAAGTCAATTTCCGGTACTCTCCCTTCCGATCTCAACTCTCTCTCTCAGCTCACTTCCCTCTCTCTTCAGAACAATGCTATCTCGGGCGCTCTCCCATCTCTTGCGAATCTCTCTTTGCTTCAAACTGTGTTCCTGTATTACAACAACTTCACCTCTATCCCTCCCGGTTGTTTCCAAGGGCTAACCAGCTTGCGAACCCTTAGCTTGAGCAACAATATCAACCTTAAACCCTGGTCTTTTCCGACCGATTTGACTCAGTCTCCTATTCTGGGCACTCTTAAGCTCAGAAATGCTAATATCGTGGGTTCCTTGCCGGATATATTCGATTCCTTCCCGAGCTTGCAGAATGTTCGCCTCTCTTACAACAACCTCACCGGGGGGTTGCCTAAAACGTTTGGGGGATCTGGAATTGTGAACTTATGGCTTAACAATCAACTCAACGGGTTATCGGGTACAATCGATGTGTTATCATCAATGGAACAGTTGTCTCAGGTTTGGCTTCATAAGAACCAGTTCACAGGTCTCATTCCCCACTTGTCCAAATGCAAGAGTTTTTTTGATTTACAGCTTCGGGACAACCAGTTAACTGGTGTGGTTCCACCTTCTTTGATGGCTCTCTCAAGCTTGCAGAACGTTTCTTTGGACAACAATGAGCTGCAGGGGGCGGTTCCCGAGTTTGGCAGTGGCGTGAAGGTTACCCTTGACGGGAATAGCTTCTGTAAAAGTAGTCCGGGAGCTTGCGATGCGCGGGTTACGACGTTGCTTGAGATTGCTGCAGCATTAGGGTACCCGTTTAGGTTGGCTGATGCGTGGAAAGACAATGACCCTTGTAATGCTTGGAGTTTTGTTGTGTGTACAAATGGGAAGATCACCACGGTGAATATGGCGAAGCAGAACTTCCAGGGAACAATCTCCCCCGCATTTGGGAATCTAACAGATTTGAGGAATTTGTATCTGAATGGTAATAATTTGAGTGGTACAATACCAGCGAGCTTGACAGCTTTGCCCGAACTCGTCGTTCTTGATGTATCTAGCAACAATCTATCTGGAAGGGTTCCAAAATTTTCGTCAAAGTTGAAGCTAACAACTACAGGTAATCTTCTGCTTGGGAAAACTCTCAGCTCTGGAGGTGGAAGAAATGGAAGTAGTCCTACTATGGGTACTTCATTGTCACCTGGTTGTATCGCAGGTATAGTCATCATTGGCCTACTTTTTGTGGCAGTGGCATTATATGCCTCTTGCAAGTATTATGCTAAAATTCGTCGTAAGAAATTTGGAAGGGTTAATGATCCTGAAAATGGAAATGATTGTGCTGGGGTTCCCAGCGAGTTACATAGCCAAAGCAGTGGTGATCGTACTGACCTTCATGTTTCTGAGGGTGGCAATGCTACATTTTCAATTCAAGTTCTTCGGCAAGCAACAAATAACTTCAGTGAAGATAACATTTTGGGTAGGGGAGGATCTGGAGTTGTTTACAAAGGGGAATTGCATGATGGAACAAAAATTGCTGTGAAGAGGATGGAATCTGTTGCGATGGGAAGCAAAGGATTGAATGAGTTCCAAGCAGAGATTGCGGTCCTTAGTAAAGTCAGGCATAGGCATTTGGTTGCCCTTTTAGGATATTGCATTAATGGCAATGAAAGGCTTTTGGTGTTTGAGTATATGCCTCAAGGGACACTAACACAACATCTGTTTGAATGGCGTGAGAATGGGTGTGCCCCTCTGACTTGGAAGCAAAGGGTGGCAATAGCTTTGACTGCAGCGCGGGGAGTGGAATACTTGCACATCTTAGCTCAGCAAAGCTTCATTCACAGAGACTTAAAACCATCAAACATACTTCTAGGTGATGACATGAGAGCAAAGGTTGCAGATTTTGGGTTGGCTAAAAATGCACCTGATGGGAAGTCTGTTGAGACACGGCTGGCTGGGACTTTTGGGTACCTTGCACCTGAATATGCAGCTACTGGAAGAGTGACAACGAAAGTGGATGTGTATGCATTTGGGGTTATTTTGATGGAACTGATCACTGGTAGAAGGGCATTATTGGACGATACTGTGCCAGATGAAAGGTCTCACTTGGTGTCATGGTTCCGTAGGGTACTGATCAACAAGGAGAGCATCACCAATGCCATTGATCAAACTCTCGACCCTGATGAGGAGACAATGGAGAGCATATACAAAGTGGCTGACCTTGCAGGGCATTGCACTGCCCGTGAGCCATACCAAAGGCCAGACATGGGCCATGCAGTGAATGTGTTGGTTCCTCTTGTGGAGCAGTGGAAACCTACTAACCATGAAGAAGAAGAAAGTTATGGCATTGACCTCCACATGAGCCTGCTTCAAGCTCTTCAAAGATGGCAAGCCAATGAAGGCACCTCTGCAATGTTTAATGAGACGGGATCAGGATCCTCAGTCGGGCGCACAGACCAGGCATAG 2649 0.4651 MSHPNLKILVPVSILLLFLPSFAIADDTAYMSKLAKALFNPSDWSDETPFCKWTGVKCDTSGRVTSINLASKSISGTLPSDLNSLSQLTSLSLQNNAISGALPSLANLSLLQTVFLYYNNFTSIPPGCFQGLTSLRTLSLSNNINLKPWSFPTDLTQSPILGTLKLRNANIVGSLPDIFDSFPSLQNVRLSYNNLTGGLPKTFGGSGIVNLWLNNQLNGLSGTIDVLSSMEQLSQVWLHKNQFTGLIPHLSKCKSFFDLQLRDNQLTGVVPPSLMALSSLQNVSLDNNELQGAVPEFGSGVKVTLDGNSFCKSSPGACDARVTTLLEIAAALGYPFRLADAWKDNDPCNAWSFVVCTNGKITTVNMAKQNFQGTISPAFGNLTDLRNLYLNGNNLSGTIPASLTALPELVVLDVSSNNLSGRVPKFSSKLKLTTTGNLLLGKTLSSGGGRNGSSPTMGTSLSPGCIAGIVIIGLLFVAVALYASCKYYAKIRRKKFGRVNDPENGNDCAGVPSELHSQSSGDRTDLHVSEGGNATFSIQVLRQATNNFSEDNILGRGGSGVVYKGELHDGTKIAVKRMESVAMGSKGLNEFQAEIAVLSKVRHRHLVALLGYCINGNERLLVFEYMPQGTLTQHLFEWRENGCAPLTWKQRVAIALTAARGVEYLHILAQQSFIHRDLKPSNILLGDDMRAKVADFGLAKNAPDGKSVETRLAGTFGYLAPEYAATGRVTTKVDVYAFGVILMELITGRRALLDDTVPDERSHLVSWFRRVLINKESITNAIDQTLDPDEETMESIYKVADLAGHCTAREPYQRPDMGHAVNVLVPLVEQWKPTNHEEEESYGIDLHMSLLQALQRWQANEGTSAMFNETGSGSSVGRTDQA 882
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa08g0219 882 FunFam receptor protein kinase TMK1 626 843 - -
Bisa08g0219 882 FunFam Leucine-rich repeat receptor-like kinase 320 443 - -
Bisa08g0219 882 Pfam Leucine rich repeat 86 143 IPR001611 GO:0005515
Bisa08g0219 882 Gene3D Phosphorylase Kinase; domain 1 512 625 - -
Bisa08g0219 882 SUPERFAMILY L domain-like 26 433 - -
Bisa08g0219 882 ProSiteProfiles Protein kinase domain profile. 548 828 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa08g0219 882 SUPERFAMILY Protein kinase-like (PK-like) 526 824 IPR011009 -
Bisa08g0219 882 FunFam Receptor-like kinase TMK4 25 316 - -
Bisa08g0219 882 Gene3D Ribonuclease Inhibitor 24 318 IPR032675 -
Bisa08g0219 882 Gene3D Transferase(Phosphotransferase) domain 1 626 849 - -
Bisa08g0219 882 Pfam Protein kinase domain 549 822 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa08g0219 882 Gene3D Ribonuclease Inhibitor 319 443 IPR032675 -
Bisa08g0219 882 FunFam receptor protein kinase TMK1 510 625 - -
Bisa08g0219 882 SMART LRR_typ_2 108 131 IPR003591 -
Bisa08g0219 882 SMART LRR_typ_2 230 253 IPR003591 -
Bisa08g0219 882 SMART LRR_typ_2 85 107 IPR003591 -
Bisa08g0219 882 SMART LRR_typ_2 132 158 IPR003591 -
Bisa08g0219 882 SMART LRR_typ_2 182 205 IPR003591 -
Bisa08g0219 882 SMART LRR_typ_2 277 300 IPR003591 -
Bisa08g0219 882 SMART LRR_typ_2 382 406 IPR003591 -
Bisa08g0219 882 PANTHER OSJNBA0070M12.3 PROTEIN 14 863 - -
Bisa08g0219 882 CDD STKc_IRAK 554 827 - -
Bisa08g0219 882 ProSitePatterns Protein kinases ATP-binding region signature. 554 576 IPR017441 GO:0005524
Bisa08g0219 882 Pfam Leucine rich repeat N-terminal domain 323 356 IPR013210 -
Bisa08g0219 882 Pfam Leucine rich repeat N-terminal domain 41 59 IPR013210 -
Bisa08g0219 882 ProSiteProfiles Leucine-rich repeat profile. 87 109 IPR001611 GO:0005515
Bisa08g0219 882 SMART serkin_6 548 828 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa08g0219 882 ProSitePatterns Serine/Threonine protein kinases active-site signature. 673 685 IPR008271 GO:0004672|GO:0006468
Bisa08g0219 882 MobiDBLite consensus disorder prediction 502 524 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa08g0219 Bisa-ChrBisa08 4175745 4179165 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa08g0219 64 824 Receptor kinase-like Gene Family AT5G07280 33.417 1.82e-90 309
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IX Bisa08g0219 Pkinase 2.2e-47 CL0016