Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa08g0214 ATGGGTCATCCCAAGCTCAAAACCCTAGTTTCTCTCTCTATACTCCTGCTCTCTCTCCTTTCCTCCGCCATTGCCGACGATGCAGCTTACATGTCCAAGCTCGCCATGGCCCTCTCCAATCCCTCCGATTGGTCCAACGAGACTCCTTTCTGCAAATGGACCGGCGTCAATTGCGACACCTCCAGCCGCGTCACCTCCATCGACCTTGCTTCCAAGTCAATTTCTGGTACTCTTCCTTCCGATCTCAACTCTCTCTCTCAGCTCACTTCCCTCTCTCTTCAGAACAATGCTCTCGCGGGCGCTCTTCCATCTTTTGCGAATCTCTCTTTGCTTGAAACCGTGTACCTGGATTACAACAATTTCACCTCTATCCCTCCCGGTTGTTTCCAAGGGCTAACCAGCTTGCAGAACCTTAGTTTGAGCAACAATATCAACCTTAAACCCTGGACGTTTCCGACCGATTTGACTCAGTCTCCGAATCTGGGCACTCTTGAGCTCGGAAATGCTAATATCGTGGGTTCTTTGCCGGATATATTCGATTCCTTTCCGAGCTTGCAGAATGTTCGTCTCTCTTACAACAACCTCACCGGTGGGTTGCCTAAAACGTTTGGGGGATCTGAAATAACGAACTTATGGCTTAACAATCAACTCAATGGATTATCAGGTACAATCGACGTGTTATCATCAATGGAGCAGTTGTCTCAGGTTTGGCTTCAAAAGAACCAGTTCACAGGTCCCATTCCTGACTTGTCCAAATGCAAGAGTTTGTTTGATTTACAGCTTCGGGACAACCAGTTAACTGGTTTAGTTCCACCTTCTTTGATGGCTCTCTCAAGATTGAAGAACGTTTCTTTGGACAACGATAAGCTGCAGGGGCCGGTTCCCGAGTTTGGCAGTGGCGTGAAGGTTACCCATGACGGGAATAGCTTCTGTAAAACTAGTCCGGGAGCTTGTGATGCGCGGGTTACAACTTTGCTTGAGATTGCTGCAGCATTGGGGTATCCGGATAGGTTGGCGGATGCGTGGAAAGATAATGACCCTTGTGATGCTTGGAGTTTTATTGTGTGTACAAATGGAAAGATTACCACGGTGAATATGGCGAAGCAGAACTTCCAGGGAACAATCTCCTCTGCATTTGGGAATCTAACAGATTTGAGGAACTTGTATCTGAATGGTAATAATTTGAGTGGTTCAATACCAAAGAGCTTGACAACTTTGCCCGAACTCGTCGTTCTTGATGTATCTAACAACAATCTATATGGAGAGGTTCCGAAATTTTTGTCAAAGGTGAAGCTGACAACTACTGGGAATCTTTTGCTTGGGAAAACTCCCAGTTCTGGAGGTGGAGGAAATGGAAGTAGTCCTACTACGGGTTCTGATGATATTACACCAGCTGGAAGTCCATCTGAAAATGGTAATGGTACTTCATTGTCACCTGGTTGGATTGCAGGTATAGTCATCATTGTCCTATTTTTTGTGGCAGTGGTATTATTTGTCTCTTGCAAGTGTTATGCTAAAAATCGTAATAAGAAATTTGGAAGGGTTAATAATCCTGAAAATGGAAAGGGAGACGTTAAAATTGATGTAATGAGTGCTTCCAATGGTTATGCTGGAGTTCCCAGCGAGTTACATAGCCAGAGCAGCGGCGATCGTAGTGACCTTCATGTTTTTGAGGGTGGCAATGCTACAATTTCAATTCAAGTTCTTCGGCAAGTAACAAATAACTTCAGTGAAGATAACATTTTGGGTAGGGGAGGATTTGGAGTTGTTTACAAAGGGGAATTGCATGATGGAACAAAAATTGCTGTGAAGAGGATGGAATCTGTTGCGATGGGAAACAAAGGATTGAATGAGTTCCAAGCAGAGATTGCTGTCCTTAGTAAAGTCAGGCATAGGCATTTGGTTGCCCTTTTAGGATATTGCATTAATGGCAATGAAAGGCTTTTGGTGTATGAGTATATGCCTCAAGGGACACTAACACAACATCTGTTTGAATGGCGTGAGAATGGATGTGCTCCTCTGATTTGGAAGCAAAGGGTAGCAATAGCTTTGGATGTAGCGCGGGGAGTGGAATACTTGCACAGCTTGGCTCAGCAGAGCTTCATTCACAGAGACTTAAAACCCTCAAACATACTTCTAGGGGATGACATGAAAGCAAAGGTTGCAGATTTTGGGTTGGTTAAAAATGCACCTGATGGGAAGTATTCTGTTGAGACACGGCTGGCTGGAACTTTTGGGTATCTTGCTCCTGAATATGCAGCTACTGGAAGAGTGACGACGAAAGTGGATGTGTATGCATTTGGGGTTGTTTTGATGGAACTGATCACTGGTAGAAGGGCATTGGACGATACTGTCCCAGATGAAAGGTCTCACTTGGTGTCATGGTTCCGTAGGGTACTGATCAATAAGGAGAACATCCCAAAGGCCATCGATCAAACTCTCGACCCTGACGAGGAGACAATGGAGAGCATATATAAAGTGGCTGAGCTTGCAGGGCATTGCACTGCCCGTGAGCCATACCAAAGGCCAGACATGGGCCATGCAGTGAATGTGCTGGTTCCTCTTGTGGAGCAGTGGAAACCTACTAACCATGAAGAAGAAGAAAGTTATGGCATTGACCTCCACATGAGCCTGCCTCAAGCTCTTCAAAGATGGCAAGCCAATGAAGGCACCTCTGCAATGTTTAATGACATGTCCCTCTCACAAACCCAATCAAGCATTCCCTCAAAACCTTCAGGGTTTGCAGACTCCTTTAATTCATTGGATTGCAGGTAA 2775 0.4533 MGHPKLKTLVSLSILLLSLLSSAIADDAAYMSKLAMALSNPSDWSNETPFCKWTGVNCDTSSRVTSIDLASKSISGTLPSDLNSLSQLTSLSLQNNALAGALPSFANLSLLETVYLDYNNFTSIPPGCFQGLTSLQNLSLSNNINLKPWTFPTDLTQSPNLGTLELGNANIVGSLPDIFDSFPSLQNVRLSYNNLTGGLPKTFGGSEITNLWLNNQLNGLSGTIDVLSSMEQLSQVWLQKNQFTGPIPDLSKCKSLFDLQLRDNQLTGLVPPSLMALSRLKNVSLDNDKLQGPVPEFGSGVKVTHDGNSFCKTSPGACDARVTTLLEIAAALGYPDRLADAWKDNDPCDAWSFIVCTNGKITTVNMAKQNFQGTISSAFGNLTDLRNLYLNGNNLSGSIPKSLTTLPELVVLDVSNNNLYGEVPKFLSKVKLTTTGNLLLGKTPSSGGGGNGSSPTTGSDDITPAGSPSENGNGTSLSPGWIAGIVIIVLFFVAVVLFVSCKCYAKNRNKKFGRVNNPENGKGDVKIDVMSASNGYAGVPSELHSQSSGDRSDLHVFEGGNATISIQVLRQVTNNFSEDNILGRGGFGVVYKGELHDGTKIAVKRMESVAMGNKGLNEFQAEIAVLSKVRHRHLVALLGYCINGNERLLVYEYMPQGTLTQHLFEWRENGCAPLIWKQRVAIALDVARGVEYLHSLAQQSFIHRDLKPSNILLGDDMKAKVADFGLVKNAPDGKYSVETRLAGTFGYLAPEYAATGRVTTKVDVYAFGVVLMELITGRRALDDTVPDERSHLVSWFRRVLINKENIPKAIDQTLDPDEETMESIYKVAELAGHCTAREPYQRPDMGHAVNVLVPLVEQWKPTNHEEEESYGIDLHMSLPQALQRWQANEGTSAMFNDMSLSQTQSSIPSKPSGFADSFNSLDCR 924
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa08g0214 924 FunFam receptor protein kinase TMK1 538 653 - -
Bisa08g0214 924 CDD STKc_IRAK 582 855 - -
Bisa08g0214 924 Gene3D Ribonuclease Inhibitor 20 318 IPR032675 -
Bisa08g0214 924 Pfam Protein tyrosine and serine/threonine kinase 579 850 IPR001245 GO:0004672|GO:0006468
Bisa08g0214 924 Pfam Leucine rich repeat 362 419 IPR001611 GO:0005515
Bisa08g0214 924 Pfam Leucine rich repeat 86 143 IPR001611 GO:0005515
Bisa08g0214 924 FunFam Leucine-rich repeat receptor-like kinase 320 443 - -
Bisa08g0214 924 ProSiteProfiles Protein kinase domain profile. 576 856 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa08g0214 924 Gene3D Transferase(Phosphotransferase) domain 1 654 877 - -
Bisa08g0214 924 PANTHER OSJNBA0070M12.3 PROTEIN 12 924 - -
Bisa08g0214 924 ProSitePatterns Serine/Threonine protein kinases active-site signature. 701 713 IPR008271 GO:0004672|GO:0006468
Bisa08g0214 924 SMART LRR_typ_2 182 205 IPR003591 -
Bisa08g0214 924 SMART LRR_typ_2 108 131 IPR003591 -
Bisa08g0214 924 SMART LRR_typ_2 406 430 IPR003591 -
Bisa08g0214 924 SMART LRR_typ_2 85 107 IPR003591 -
Bisa08g0214 924 SMART LRR_typ_2 382 405 IPR003591 -
Bisa08g0214 924 FunFam receptor protein kinase TMK1 654 871 - -
Bisa08g0214 924 ProSitePatterns Protein kinases ATP-binding region signature. 582 604 IPR017441 GO:0005524
Bisa08g0214 924 SUPERFAMILY Protein kinase-like (PK-like) 552 852 IPR011009 -
Bisa08g0214 924 MobiDBLite consensus disorder prediction 441 473 - -
Bisa08g0214 924 Pfam Leucine rich repeat N-terminal domain 38 59 IPR013210 -
Bisa08g0214 924 Pfam Leucine rich repeat N-terminal domain 322 356 IPR013210 -
Bisa08g0214 924 Gene3D Phosphorylase Kinase; domain 1 540 653 - -
Bisa08g0214 924 FunFam Receptor-like kinase TMK4 25 316 - -
Bisa08g0214 924 SMART serkin_6 576 856 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa08g0214 924 SUPERFAMILY L domain-like 23 433 - -
Bisa08g0214 924 Gene3D Ribonuclease Inhibitor 319 443 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa08g0214 Bisa-ChrBisa08 4009703 4013272 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa08g0214 37 861 Receptor kinase-like Gene Family AT5G49660 29.841 3.51e-94 317
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IX Bisa08g0214 PK_Tyr_Ser-Thr 3.4e-47 CL0016