Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa08g0196 ATGGACGGAGCGCCATCTTCCTCCGCCGGCGCCGGCGCTGGAGGCCCGGCACCCTTTCTTATCAAGACCTACGACATGGTCGACGATTCTTCCACCGACGATATTGTCTCATGGAGCTCCACCAACAATAGCTTCATCGTCTGGAACCCGCCGGAGTTCGCTCGTCTGCTTCTTCCTACCTATTTCAAGCACAACAACTTCTCCAGCTTCATCCGCCAGCTCAATACCTATGGATTTCGAAAAATACATCCTGAACGATGGGAGTTTGCTAATGATGACTTTGTGAAAGATCAAAAGCATCTTCTCAAGAATATTCATCGCAGGAAACCTATCCACAGTCACAGCAATCCTCCAGGATCTCTCGGGGATCCAGAACGGGCAGCTTTTGAGGAAGAAATAGAGAGACTTTTGCGTGAGAAAACTGCTCTGGAATCCAATATTTTCAGATTTAAACAACACTCAGCTGCAAAGCTTCAGCTGGATGATCTATTGCAGCGATTAGATGGTATGGAGAAGAGGCAGAAGAATTTGCTGAACTTCATTGAAAAGGCTCTTCAGAATCCTACATTCGTTGAACATCTTTCACAGAAATTTGAGTGCATGGACTTATCGGCATACAATAAGAAAAGACGATTGCCTCAGGTTGATCACTTGCAGCCAGTTGCAGAAAGTAGCTTTGTTGAAAATCATAGCAATTTCAGAACAGAATTTGGGAATGTCTTCCACCAAGATTTCTCAAATAAACTCCGATTGGAGTTATCACCGGCTGTTTCAGACATGAATCTGGTATCTCGTAGCACACAGAGTTCAAATGAAGATGGGGAAAATCCACAGAAGAAGCTATCCGAAGGAACACCAAAAGGAGTGCAGACAAGAACAGCTCTAGCATTTGCACCCGAAACATTAGAACTTGCAGATACTGGAGCATCTTTTACATTCAAAATGGATTCATGCCTATCACAACGAGCAACAACTGCTGAGAACACAAAACTGCAATCTTTGCATCTAAGTAATGAAGATGGCGATAGTCATATATCGTGCCATCTAAATTTAACTCTGGCATCCTCTCCTCTGCAAGTCAACAGAAATTCATACTCAGCCAGATCACCCCAAATAGACTGTCAGGAAATTGGCAAATTGGCAGAATCAAGATTTCATGACAACGATAAAGATTCTAATAGCGGAGTTCCTTCAACCCGAAACCTGGCTAATGAGGCAGCCAATTTAGCTTCCTCACAGGAGACCCCAAGCAACCACCAAGCGCCACCAGCTGCTCCGGCTAGAGTGAATGATGTTTTCTGGGAACAGTTTCTTACTGAAAGACCTGGCTGTTCAGACAATGAAGAGGCGATATCAAACTACAGAGGAAATCCATATGACGAGCAAGACGAAGGCCGGTCAATCCATGGAATCTCTAGGAATGTGAAGAATATGGACCAGCTCACCCTTTGA 1452 0.4456 MDGAPSSSAGAGAGGPAPFLIKTYDMVDDSSTDDIVSWSSTNNSFIVWNPPEFARLLLPTYFKHNNFSSFIRQLNTYGFRKIHPERWEFANDDFVKDQKHLLKNIHRRKPIHSHSNPPGSLGDPERAAFEEEIERLLREKTALESNIFRFKQHSAAKLQLDDLLQRLDGMEKRQKNLLNFIEKALQNPTFVEHLSQKFECMDLSAYNKKRRLPQVDHLQPVAESSFVENHSNFRTEFGNVFHQDFSNKLRLELSPAVSDMNLVSRSTQSSNEDGENPQKKLSEGTPKGVQTRTALAFAPETLELADTGASFTFKMDSCLSQRATTAENTKLQSLHLSNEDGDSHISCHLNLTLASSPLQVNRNSYSARSPQIDCQEIGKLAESRFHDNDKDSNSGVPSTRNLANEAANLASSQETPSNHQAPPAAPARVNDVFWEQFLTERPGCSDNEEAISNYRGNPYDEQDEGRSIHGISRNVKNMDQLTL 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa08g0196 483 MobiDBLite consensus disorder prediction 444 483 - -
Bisa08g0196 483 Coils Coil 153 173 - -
Bisa08g0196 483 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 9 275 IPR027725 -
Bisa08g0196 483 SUPERFAMILY "Winged helix" DNA-binding domain 15 108 IPR036390 -
Bisa08g0196 483 PRINTS Heat shock factor (HSF) domain signature 70 82 IPR000232 GO:0003700|GO:0006355|GO:0043565
Bisa08g0196 483 PRINTS Heat shock factor (HSF) domain signature 57 69 IPR000232 GO:0003700|GO:0006355|GO:0043565
Bisa08g0196 483 PRINTS Heat shock factor (HSF) domain signature 19 42 IPR000232 GO:0003700|GO:0006355|GO:0043565
Bisa08g0196 483 ProSitePatterns HSF-type DNA-binding domain signature. 58 82 IPR000232 GO:0003700|GO:0006355|GO:0043565
Bisa08g0196 483 MobiDBLite consensus disorder prediction 106 125 - -
Bisa08g0196 483 Pfam HSF-type DNA-binding 19 108 IPR000232 GO:0003700|GO:0006355|GO:0043565
Bisa08g0196 483 FunFam Heat shock transcription factor 1 12 109 - -
Bisa08g0196 483 Coils Coil 126 146 - -
Bisa08g0196 483 MobiDBLite consensus disorder prediction 263 289 - -
Bisa08g0196 483 Gene3D - 14 109 IPR036388 -
Bisa08g0196 483 SMART hsfneu3 15 108 IPR000232 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa08g0196 Bisa-ChrBisa08 3605269 3610324 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa08g0196 19 483 HSF AT4G13980 56.476 1.40e-172 492
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Bisa08g0196 HSF_DNA-bind 2.4e-31 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa08g0196 08 3605269 3610324 Bisa08g0196 08 3605269 3610324 ECH