Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa08g0177 ATGGGAGAAGGCAGATTGGCGGGAGTAGCAAGCATGGACAGACATGGAATTTCTTTCTTGAAACCTAGACAAGAAGCCGCTTCACTCCAATTTCTCAAACCAGATCTCTTGCCTCCTTCTCTGAGGCACAATATTCTCATAATGGCTTTCTGCAATAAACTTGGGAATCTTTTGAGGCAGAGCGTTGCTCAGAATAGACAAGTACCGGTTTCATCAATGTTGAACTATGTTCGCTGCATGTCATCCTCCAAGCTTTTCATTGGAGGCCTTTCTTATGGAGTCGATGACCAGTCTCTTAAGGATGCATTTGCCAGCTTTGGTGATGTGGTTGAGGCCAGGGTTATCACTGATAGAGACACTGGAAGGTCAAGGGGTTTTGGATTTGTCAACTTCTCTAGTGATGAATCAGCATCTTCAGCCATGTCTGCAATGGATGGGCAGGAGCTTAATGGGCGAAACATTCGGGTGAGCTATGCCAATGATAGACCATCTGGTCCTCGATCTTATGGTGGTGGTGGTTATGGTGGTGGAGGTTATGGTGGTGGAGGTTATGGTGGTGGCAGTTATGGCGGTGGCGGCGGCAGAGGCAGTGGCTATGGTGGAAGTGGTGGTGGGGGTTTTGATAACCCCTCCTTTTAA 639 0.4789 MGEGRLAGVASMDRHGISFLKPRQEAASLQFLKPDLLPPSLRHNILIMAFCNKLGNLLRQSVAQNRQVPVSSMLNYVRCMSSSKLFIGGLSYGVDDQSLKDAFASFGDVVEARVITDRDTGRSRGFGFVNFSSDESASSAMSAMDGQELNGRNIRVSYANDRPSGPRSYGGGGYGGGGYGGGGYGGGSYGGGGGRGSGYGGSGGGGFDNPSF 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa08g0177 212 CDD RRM2_NsCP33_like 84 159 - -
Bisa08g0177 212 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 85 155 IPR000504 GO:0003723
Bisa08g0177 212 SMART rrm1_1 84 157 IPR000504 GO:0003723
Bisa08g0177 212 MobiDBLite consensus disorder prediction 185 212 - -
Bisa08g0177 212 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 83 161 IPR000504 GO:0003723
Bisa08g0177 212 Gene3D - 76 208 IPR012677 -
Bisa08g0177 212 PANTHER HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN 87F-RELATED 77 205 - -
Bisa08g0177 212 FunFam Glycine-rich RNA-binding protein 3 mitochondrial 64 183 - -
Bisa08g0177 212 SUPERFAMILY RNA-binding domain, RBD 66 193 IPR035979 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa08g0177 Bisa-ChrBisa08 2780199 2784961 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa08g0177 82 164 Eukaryotic Initiation Factors Gene Family AT1G49760 40.964 9.80e-14 67.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa08g0177 08 2780199 2784961 Bisa08g0177 08 2780199 2784961 ECH