Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa08g0159 ATGATTGATACCATAAATGAAATATTTTTCTGCTCATCTTTCCGTCAGTTACCGAAAGTTTCTGAATTTGGAGCAATCGTTGCAAAAGAACAAGGGCAAGCCAAAAGCCAGATTGAGACCTTCACCACAGAGATGCGTTGCTATGGCTTAACAATCACAGGAAGCGATTATCGCTTCTTCTCCGCGAAACCCATTTCGCTTCACCCCAACACCACTCTCGCTCACAAATCCCTCAGTTTCCCCTCTCGGACTTTCGGTGCCTCCCTCAAAGTTAAAGCCGCCGTCAGCGAGGGTTGCGTGGCGGAGGCCGCCGATTTGAGCTTCTACGAGCTTCTCGGTATCCCCGAGTCTGGGTCCTTGCTCGAGATCAAGCAGGCCTACAAGCAGCTCGCGCGCAAGTACCATCCCGATGTGTCGCCGCCGGATCGGGTCGAGGAGTACACGAGGAGGTTCATTCAGGTGCAAGAGGCCTACGAGACCTTGTCTGATCCTAGAAGGAGAGCTTTGTATGACAGTGACATGGCCAGAGGGATTCACTTGGCTTTCTCCGCTCGCCGGCGCTACAACGACGATGAGGTAAATTTTGAGCAGAAAAATGAGTGGAAAGCTCGTTGGGAATCTCAGCTCTCAGAACTGAAGAGAAGAAGCAAGTTCAAGGATGCAGGAGAAAACATGTCATGGGCAGCTCGCATGCGCAGGAGAAGACAAGAATCATCTGATGAATTATGA 729 0.5062 MIDTINEIFFCSSFRQLPKVSEFGAIVAKEQGQAKSQIETFTTEMRCYGLTITGSDYRFFSAKPISLHPNTTLAHKSLSFPSRTFGASLKVKAAVSEGCVAEAADLSFYELLGIPESGSLLEIKQAYKQLARKYHPDVSPPDRVEEYTRRFIQVQEAYETLSDPRRRALYDSDMARGIHLAFSARRRYNDDEVNFEQKNEWKARWESQLSELKRRSKFKDAGENMSWAARMRRRRQESSDEL 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa08g0159 242 ProSitePatterns Nt-dnaJ domain signature. 151 170 IPR018253 -
Bisa08g0159 242 PANTHER CHAPERONE PROTEIN DNAJ 20 CHLOROPLASTIC 92 239 - -
Bisa08g0159 242 CDD DnaJ 108 163 IPR001623 -
Bisa08g0159 242 Gene3D DnaJ domain 97 202 IPR036869 -
Bisa08g0159 242 PRINTS DnaJ domain signature 146 166 IPR001623 -
Bisa08g0159 242 PRINTS DnaJ domain signature 127 142 IPR001623 -
Bisa08g0159 242 PRINTS DnaJ domain signature 109 127 IPR001623 -
Bisa08g0159 242 FunFam Chaperone protein dnaJ 20, chloroplastic 93 203 - -
Bisa08g0159 242 SUPERFAMILY Chaperone J-domain 105 177 IPR036869 -
Bisa08g0159 242 SMART dnaj_3 106 166 IPR001623 -
Bisa08g0159 242 Pfam DnaJ domain 108 171 IPR001623 -
Bisa08g0159 242 ProSiteProfiles dnaJ domain profile. 107 174 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa08g0159 Bisa-ChrBisa08 2107108 2109489 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa08g0159 109 172 C2H2 Transcription Factor Family AT1G74250 44.776 6.50e-08 50.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa08g0159 08 2107108 2109489 Bisa08g0159 08 2107108 2109489 ECH